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PROSITE documentation PDOC51740 |
The SpoVT-AbrB domain is a DNA-binding domain found in a large protein superfamily [1,2], which includes:
The SpoVT-AbrB domain contains four β strands and one α helix and can be described as a pair of β hairpins linked by the α helix (see <PDB:1YSF>) [1,2].
The profile we developed covers the entire SpoVT-AbrB domain.
Last update:December 2014 / First entry.
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PROSITE method (with tools and information) covered by this documentation:
1 | Authors | Bobay B.G. Andreeva A. Mueller G.A. Cavanagh J. Murzin A.G. |
Title | Revised structure of the AbrB N-terminal domain unifies a diverse superfamily of putative DNA-binding proteins. | |
Source | FEBS Lett. 579:5669-5674(2005). | |
PubMed ID | 16223496 | |
DOI | 10.1016/j.febslet.2005.09.045 |
2 | Authors | Coles M. Djuranovic S. Soeding J. Frickey T. Koretke K. Truffault V. Martin J. Lupas A.N. |
Title | AbrB-like transcription factors assume a swapped hairpin fold that is evolutionarily related to double-psi beta barrels. | |
Source | Structure 13:919-928(2005). | |
PubMed ID | 15939023 | |
DOI | 10.1016/j.str.2005.03.017 |