PROSITE entry PS00020
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry
Entry name [info] | ACTININ_2 |
Accession [info] | PS00020 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-APR-2006 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00019 |
Name and characterization of the entry
Description [info] | Actinin-type actin-binding domain signature 2. |
Pattern [info] |
[LIVM]-x-[SGNL]-[LIVMN]-[DAGHENRS]-[SAGPNVT]-x-[DNEAG]-[LIVM]-x-[DEAGQ]- x(4)-[LIVM]-x-[LM]-[SAG]-[LIVM]-[LIVMT]-[WS]-x(0,1)-[LIVM](2). |
Numerical results [info]
Total number of hits | 103 in 88 different sequences |
Number of true positive hits | 103 in 88 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 1 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 99.04 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 2 |
Version [info] | 2 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
88 sequences
ACTN1_BOVIN (Q3B7N2), ACTN1_CHICK (P05094), ACTN1_HUMAN (P12814), ACTN1_MACFA (Q2PFV7), ACTN1_MOUSE (Q7TPR4), ACTN1_RAT (Q9Z1P2), ACTN2_BOVIN (Q3ZC55), ACTN2_CHICK (P20111), ACTN2_HUMAN (P35609), ACTN2_MOUSE (Q9JI91), ACTN3_BOVIN (Q0III9), ACTN3_HUMAN (Q08043), ACTN3_MOUSE (O88990), ACTN4_BOVIN (A5D7D1), ACTN4_CHICK (Q90734), ACTN4_HUMAN (O43707), ACTN4_MOUSE (P57780), ACTN4_PONAB (Q5RCS6), ACTN4_RAT (Q9QXQ0), ACTNA_DICDI (P05095), ACTNB_DICDI (O76329), ACTN_ANOGA (Q7PKQ5), ACTN_DERFA (L7UZ85), ACTN_DROME (P18091), AIN1_SCHPO (O13728), ANC1_CAEEL (Q9N4M4), CLMN_HUMAN (Q96JQ2), CLMN_MOUSE (Q8C5W0), DMDA_DROME (Q9VDW6), DMD_CANLF (O97592), DMD_CHICK (P11533), DMD_HUMAN (P11532), DMD_MOUSE (P11531), DMD_PIG (Q5GN48), DMD_RAT (P11530), DYST_HUMAN (Q03001), DYST_MOUSE (Q91ZU6), FIMB1_ARATH (Q7G188), FIMB2_ARATH (O50064), FIMB3_ARATH (Q9FJ70), FIMB5_ARATH (Q9FKI0), FIMB_DICDI (P54680), FIMB_SCHPO (O59945), FIMB_YEAST (P32599), FLNA_DROME (Q9VEN1), FLNA_HUMAN (P21333), FLNA_MOUSE (Q8BTM8), FLNB_HUMAN (O75369), FLNB_MOUSE (Q80X90), FLNC_HUMAN (Q14315), FLNC_MOUSE (Q8VHX6), FLNC_RAT(D3ZHA0), GELA_DICDI (P13466), MACF1_HUMAN (Q9UPN3), MACF1_MOUSE (Q9QXZ0), MACF1_RAT (D3ZHV2), MS300_DROME (M9MRD1), PLEC_CRIGR (Q9JI55), PLEC_HUMAN (Q15149), PLEC_MOUSE (Q9QXS1), PLEC_RAT(P30427), PLSI_BOVIN (A6H742), PLSI_CHICK (P19179), PLSI_HUMAN (Q14651), PLSI_MOUSE (Q3V0K9), PLSL_DANRE (Q6P698), PLSL_HUMAN (P13796), PLSL_MOUSE (Q61233), PLST_BOVIN (A7E3Q8), PLST_CRIGR (O88818), PLST_HUMAN (P13797), PLST_MOUSE (Q99K51), PLST_RAT(Q63598), SPTB1_HUMAN (P11277), SPTB1_MOUSE (P15508), SPTB2_HUMAN (Q01082), SPTB2_MOUSE (Q62261), SPTCB_DROME (Q00963), SPTN2_HUMAN (O15020), SPTN2_RAT (Q9QWN8), SPTN4_HUMAN (Q9H254), SPTN5_HUMAN (Q9NRC6), SYNE1_HUMAN (Q8NF91), SYNE1_MOUSE (Q6ZWR6), SYNE2_HUMAN (Q8WXH0), SYNE2_MOUSE (Q6ZWQ0), UTRN_HUMAN (P46939), UTRN_RAT(G3V7L1)» more
|
UniProtKB/Swiss-Prot False negative sequences |
1 sequence
DMD_CAEEL (Q9TW65) |
PDB [Detailed view] |
46 PDB
1AOA; 1DXX; 1MB8; 1PXY; 1QAG; 1RT8; 1SH5; 1SH6; 1SJJ; 1TJT; 1WKU; 2EYI; 2EYN; 2R0O; 2WA5; 2WA6; 2WA7; 2WFN; 3F7P; 3FER; 3HOC; 3HOP; 3HOR; 3LUE; 4B7L; 4D1E; 4Q57; 4Q58; 4Q59; 4Z6G; 5A36; 5A37; 5A38; 5A4B; 5BVR; 6ANU; 6D8C; 6M5G; 6O31; 6OA6; 6SWT; 6VEC; 7R94; 7SX8; 7SX9; 7SXA » more |