PROSITE entry PS00024
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General information about the entry
| Entry name [info] | HEMOPEXIN |
| Accession [info] | PS00024 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-APR-2006 DATA UPDATE; 13-SEP-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00023 |
Name and characterization of the entry
| Description [info] | Hemopexin domain signature. |
| Pattern [info] |
[LIFAT]-{IL}-x(2)-W-x(2,3)-[PE]-x-{VF}-[LIVMFY]-[DENQS]-[STA]-[AV]-
[LIVMFY].
|
Numerical results [info]
| Total number of hits | 132 in 125 different sequences |
| Number of true positive hits | 82 in 75 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 50 in 50 different sequences |
| Number of false negative sequences | 23 |
| Number of 'partial' sequences | 1 |
| Precision (true positives / (true positives + false positives)) | 62.12 % |
| Recall (true positives / (true positives + false negatives)) | 78.10 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 2 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
75 sequences
HEMO_BOVIN (Q3SZV7), HEMO_HUMAN (P02790), HEMO_MOUSE (Q91X72), HEMO_PIG(P50828), HEMO_PONAB (Q5R543), HEMO_RABIT (P20058), HEMO_RAT(P20059), HE_HEMPU(P91953), MMP10_HUMAN (P09238), MMP10_MOUSE (O55123), MMP10_RAT (P07152), MMP11_HUMAN (P24347), MMP11_MOUSE (Q02853), MMP11_RAT (Q499S5), MMP11_XENLA (Q11005), MMP12_HUMAN (P39900), MMP12_MOUSE (P34960), MMP12_RABIT (P79227), MMP12_RAT (Q63341), MMP13_HORSE (O18927), MMP13_HUMAN (P45452), MMP13_MOUSE (P33435), MMP13_RABIT (O62806), MMP13_RAT (P23097), MMP13_XENLA (Q10835), MMP14_BOVIN (Q9GLE4), MMP14_HUMAN (P50281), MMP14_MOUSE (P53690), MMP14_PIG (Q9XT90), MMP14_PONAB (Q5RES1), MMP14_RABIT (Q95220), MMP14_RAT (Q10739), MMP15_HUMAN (P51511), MMP15_MOUSE (O54732), MMP16_HUMAN (P51512), MMP16_MOUSE (Q9WTR0), MMP16_RAT (O35548), MMP19_MOUSE (Q9JHI0), MMP1A_MOUSE (Q9EPL5), MMP1B_MOUSE (Q9EPL6), MMP1_BOVIN (P28053), MMP1_HORSE (Q9XSZ5), MMP1_HUMAN (P03956), MMP1_PIG(P21692), MMP1_RABIT (P13943), MMP24_HUMAN (Q9Y5R2), MMP24_MOUSE (Q9R0S2), MMP24_RAT (Q99PW6), MMP27_HUMAN (Q9H306), MMP27_TUPBE (Q9GKE1), MMP2_BOVIN (Q9GLE5), MMP2_CHICK (Q90611), MMP2_HUMAN (P08253), MMP2_MOUSE (P33434), MMP2_RABIT (P50757), MMP2_RAT(P33436), MMP3_CANLF (Q6Y4Q5), MMP3_HORSE (Q28397), MMP3_HUMAN (P08254), MMP3_MOUSE (P28862), MMP3_RABIT (P28863), MMP3_RAT(P03957), MMP8_HUMAN (P22894), MMP8_MOUSE (O70138), MMP8_RAT(O88766), MMP9_HUMAN (P14780), MMP9_MOUSE (P41245), MMP9_RABIT (P41246), MMP9_RAT(P50282), PRG4_HUMAN (Q92954), PRG4_MOUSE (Q9JM99), VTNC_HUMAN (P04004), VTNC_MOUSE (P29788), VTNC_PIG(P48819), VTNC_RABIT (P22458)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
23 sequences
D2MP_DROME (Q8MPP3), HE_PARLI(P22757), MMP13_BOVIN (O77656), MMP17_HUMAN (Q9ULZ9), MMP17_MOUSE (Q9R0S3), MMP18_XENLA (O13065), MMP19_HUMAN (Q99542), MMP1_LITCT (Q11133), MMP20_BOVIN (O18767), MMP20_HUMAN (O60882), MMP20_MOUSE (P57748), MMP20_PIG (P79287), MMP21_CYNPY (Q90YC2), MMP21_HUMAN (Q8N119), MMP21_MOUSE (Q8K3F2), MMP21_XENLA (O93470), MMP25_HUMAN (Q9NPA2), MMP25_MOUSE (Q3U435), MMP28_HUMAN (Q9H239), MMP9_BOVIN (P52176), MMP9_CANLF (O18733), MMPA_CAEEL (G5EGM1), MMPC_CAEEL (G5EBU3)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
HEMO_CHICK (P20057) |
| UniProtKB/Swiss-Prot False positive sequences |
50 sequences
ASTE_PARXL (Q141D1), BPHA4_RHOJR (Q0S032), CPLN1_MOUSE (Q8CE72), DPP6_PANTR (Q5IS50), GC_PSHV1(Q6UDI7), HISX_PROMM (Q7V5N9), KATG_MYCGI (A4TA35), LGRC_BREPA (Q70LM5), LTD_ORYSI (A2YLX7), LTD_ORYSJ (A3BKF2), MPPE1_AILME (D2I2M6), MPPE1_CHICK (Q5ZK82), MPPE1_CRIGR (C7G3A0), MPPE1_HUMAN (Q53F39), MPPE1_MACFA (Q9GMS6), MPPE1_MOUSE (Q80XL7), MPPE1_PONAB (Q5RET5), MPPE1_RAT (B1WC86), MPPE1_XENLA (Q0IHA5), MSLN_HUMAN (Q13421), NIFJ_ECOLI (P52647), OPGG2_SHEON (Q8EDL2), PMA6E_HUMAN (A0A0J9YXQ4), PORCN_CAEBR (A8WZ09), STEA4_HUMAN (Q687X5), STEA4_MOUSE (Q923B6), SYE1_RHIWR (A5V932), SYT_HAEDU (Q7VKR9), TFE_METTP (A0B9P3), TMCA_CITK8 (A8ADB3), TRAK1_HUMAN (Q9UPV9), TRAK1_MOUSE (Q6PD31), TYSY_HALVO (Q9UWQ5), UBID_BURL3 (Q39IR6), UBID_BURMA (Q62HU9), UBID_BURO1 (Q1BYC0), UBID_BURP1 (Q3JPM4), UBID_BURPS (Q63RP1), UBID_BURTA (Q2SYC8), UBID_METCA (Q602K0), UBID_NITEU (Q82TP1), UBID_THIDA (Q3SMI8), URE1_ACIAD (Q6FD83), URE1_CORGL (Q79VJ3), UTP20_SCHPO (O60055), Y022_ALKMQ (A6TJ97), Y1488_MYCTO (P9WPR8), Y1488_MYCTU (P9WPR9), Y1524_MYCBO (P63694), Y3298_MAGMM (A0LCU4)» more |
| PDB [Detailed view] |
24 PDB
1CK7; 1FBL; 1GEN; 1GXD; 1HXN; 1ITV; 1PEX; 1QHU; 1QJS; 1RTG; 1SU3; 2CLT; 2JXY; 2MQS; 3BA0; 3C7X; 4AUO; 4FU4; 4FVL; 4G0D; 6CLZ; 6CM1; 6O5E; 7RJ9 » more |