Entry: PS00026

General information about the entry

Entry name [info] CHIT_BIND_I_1
Accession [info] PS00026
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED; 01-DEC-2004 DATA UPDATE; 25-APR-2018 INFO UPDATE.
PROSITE Doc. [info] PDOC00025

Name and characterization of the entry

Description [info] Chitin recognition or binding domain signature.
Pattern [info]
C-x(4,5)-C-C-S-x(2)-G-x-C-G-x(3,4)-[FYW]-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2018_04 which contains 557'275 sequence entries.


Total number of hits 102 in 81 different sequences
Number of true positive hits 100 in 79 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 2
Number of 'partial' sequences 7
Precision (true positives / (true positives + false positives)) 98.04 %
Recall (true positives / (true positives + false negatives)) 98.04 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 4
Site [info] disulfide at position 1
Site [info] disulfide at position 3
Site [info] disulfide at position 4
Site [info] disulfide at position 9
Site [info] disulfide at position 13
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
79 sequences

AGI1_WHEAT  (P10968    ), AGI2_WHEAT  (P02876    ), AGI3_WHEAT  (P10969    ), 
AGI_HORVU   (P15312    ), AGI_ORYSI   (Q01MB6    ), AGI_ORYSJ   (Q0JF21    ), 
AGI_URTDI   (P11218    ), AMP1_FAGES  (P0DKH7    ), AMP1_STEME  (E1UYT9    ), 
AMP2_FAGES  (P0DKH8    ), AMP2_STEME  (E1UYU0    ), AMP3_STEME  (C0HJU5    ), 
AMP_AMACA   (P27275    ), AMP_AMARE   (Q5I2B2    ), AMP_IPONI   (P81591    ), 
CBLE_VISAL  (P81859    ), CHAL_BRARR  (P81729    ), CHI12_ORYSJ (P25765    ), 
CHI1_GOSHI  (Q39799    ), CHI1_HORVU  (P11955    ), CHI1_ORYSJ  (Q42993    ), 
CHI1_SOLTU  (P52403    ), CHI1_THECC  (Q41596    ), CHI1_TOBAC  (P08252    ), 
CHI2_BRANA  (Q09023    ), CHI2_GOSHI  (Q39785    ), CHI2_ORYSJ  (Q7DNA1    ), 
CHI2_PEA    (P21226    ), CHI2_SOLTU  (P52404    ), CHI2_TOBAC  (P24091    ), 
CHI3_ORYSJ  (P24626    ), CHI3_SOLTU  (P52405    ), CHI3_TOBAC  (P29059    ), 
CHI4_BRANA  (Q06209    ), CHI4_ORYSJ  (O04138    ), CHI4_PHAVU  (P27054    ), 
CHI4_SOLTU  (P52406    ), CHI58_ARATH (O24598    ), CHI59_ARATH (O24658    ), 
CHI5_ARATH  (Q9M2U5    ), CHI5_ORYSJ  (Q7Y1Z0    ), CHI5_PHAVU  (P36361    ), 
CHI60_ARATH (O24654    ), CHI61_ARATH (O22842    ), CHI62_ARATH (O22841    ), 
CHI6_ORYSJ  (Q6K8R2    ), CHI6_POPTR  (P16579    ), CHI7_ORYSI  (Q9SAY3    ), 
CHI7_ORYSJ  (Q7Y1Z1    ), CHI8_POPTR  (P16061    ), CHI9_ORYSJ  (Q688M5    ), 
CHIA_MAIZE  (P29022    ), CHIA_SECCE  (Q9FRV1    ), CHIB_ARATH  (P19171    ), 
CHIB_MAIZE  (P29023    ), CHIB_POPTR  (P29031    ), CHIB_VITVI  (P51613    ), 
CHIC_POPTR  (P29032    ), CHIC_SOLLC  (Q05538    ), CHIP_BETVU  (P42820    ), 
CHIT_DIOJA  (P80052    ), CHIT_PHAVU  (P06215    ), CHIT_SOLTU  (P05315    ), 
CHIX_PEA    (P36907    ), CHI_ARATH   (O24603    ), EAP1_EUCUL  (P83596    ), 
EAP2_EUCUL  (P83597    ), HEVE_HEVBR  (P02877    ), HEVL_ARATH  (P43082    ), 
HEVP_HEVBR  (P80359    ), KTXA_KLULA  (P09805    ), LECB_PHYAM  (Q9AVB0    ), 
LECC_PHYAM  (Q9AYP9    ), LECT_SOLTU  (Q9S8M0    ), LED2_PHYAM  (P83790    ), 
LYSM4_ARTBC (D4B4Q2    ), MLX56_MORAL (A7XQ02    ), WIN1_SOLTU  (P09761    ), 
WIN2_SOLTU  (P09762    )
» more

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

AMP1A_LYMAR (P86521    ), AMP_TRIKH   (P85966    )

		
UniProtKB/Swiss-Prot
'Partial' sequences
7 sequences

CHIB_PEA    (P21227    ), CHIT_ACTCH  (P86473    ), CHIT_TRISX  (C0HJM6    ), 
IAMY_COILA  (P15326    ), IPLAA_MORAL (P86799    ), IPLAB_MORAL (P86800    ), 
LECA_PHYAM  (P84282    )
» more

UniProtKB/Swiss-Prot
False positive sequences
2 sequences

CRF2_ASPFU  (Q4WI46    ), CRH2_YEAST  (P32623    )

		
PDB
[Detailed view]
34 PDB

1EN2; 1ENM; 1HEV; 1IQB; 1K7T; 1K7U; 1K7V; 1MMC; 1P9G; 1P9Z; 1Q9B; 1T0W; 1UHA; 1ULK; 1ULM; 1ULN; 1WGC; 1WGT; 1WKX; 1ZNT; 1ZUV; 1ZWU; 2CWG; 2DKV; 2KUS; 2N1S; 2UVO; 2WGC; 2X3T; 2X52; 4AML; 4WP4; 7WGA; 9WGA
» more

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