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PROSITE entry PS00034


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General information about the entry

Entry name [info] PAIRED_1
Accession [info] PS00034
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-APR-1990 DATA UPDATE;
03-MAY-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00034

Name and characterization of the entry

Description [info] Paired DNA-binding domain signature.
Pattern [info]
R-P-C-x(11)-C-V-S.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_02 which contains 569'516 sequence entries.


Total number of hits 69 in 69 different sequences
Number of true positive hits 62 in 62 different sequences
Number of 'unknown' hits 0
Number of false positive hits 7 in 7 different sequences
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 89.86 %
Recall (true positives / (true positives + false negatives)) 98.41 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
62 sequences

GSBN_DROME  (P09083), GSB_DROME   (P09082), PAX1H_CAEEL (Q21272), 
PAX1_CHICK  (P47236), PAX1_HUMAN  (P15863), PAX1_MOUSE  (P09084), 
PAX2A_DANRE (Q90268), PAX2A_XENLA (O57685), PAX2B_XENLA (O57682), 
PAX2H_CAEEL (Q21263), PAX2_HUMAN  (Q02962), PAX2_MOUSE  (P32114), 
PAX3A_XENLA (Q645N4), PAX3B_XENLA (Q0IH87), PAX3_HUMAN  (P23760), 
PAX3_MOUSE  (P24610), PAX3_XENTR  (Q28DP6), PAX4_HUMAN  (O43316), 
PAX4_MOUSE  (P32115), PAX4_RAT(O88436), PAX5H_CAEEL (G5ED14), 
PAX5_HUMAN  (Q02548), PAX5_MOUSE  (Q02650), PAX5_XENLA  (Q9YH95), 
PAX6_BOVIN  (Q1LZF1), PAX6_COTJA  (P47238), PAX6_DANRE  (P26630), 
PAX6_DROME  (O18381), PAX6_HUMAN  (P26367), PAX6_MOUSE  (P63015), 
PAX6_ORYLA  (O73917), PAX6_RAT(P63016), PAX6_XENLA  (P55864), 
PAX7_HUMAN  (P23759), PAX7_MOUSE  (P47239), PAX8_CANLF  (P47240), 
PAX8_HUMAN  (Q06710), PAX8_MOUSE  (Q00288), PAX8_PONAB  (Q5R9M8), 
PAX8_RAT(P51974), PAX8_XENLA  (Q9PUK5), PAX8_XENTR  (A0JMA6), 
PAX9_CALGO  (Q2VL59), PAX9_CALJA  (Q2VL58), PAX9_CHICK  (P55166), 
PAX9_DAUMA  (Q2VL53), PAX9_HUMAN  (P55771), PAX9_LEMCA  (Q2VL52), 
PAX9_LEORO  (Q2VL57), PAX9_LEPED  (Q2VL51), PAX9_MACMU  (Q2VL61), 
PAX9_MOUSE  (P47242), PAX9_PANTR  (Q2VL62), PAX9_PERPO  (Q2VL54), 
PAX9_PROCO  (Q2VL50), PAX9_RAT(Q2L4T2), PAX9_SAGOE  (Q2VL56), 
PAX9_SAIBB  (Q2VL60), POXM_DROME  (P23757), POXN_DROME  (P23758), 
PRD_DROME   (P06601), VAB3_CAEEL  (G5EDS1)
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

PAX3H_CAEEL (G5ED66)

		
UniProtKB/Swiss-Prot
False positive sequences
7 sequences

UVRC_MANSM  (Q65U16), UVRC_PECAS  (Q6D363), UVRC_THIDA  (Q3SKW8), 
UVRC_VIBPA  (Q87NC4), UVRC_VIBVU  (Q8D8C7), UVRC_VIBVY  (Q7MM39), 
Y150_TNAVC  (Q06VD3)
» more

PDB
[Detailed view]
5 PDB

1K78; 1MDM; 1PDN; 2K27; 6PAX