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Entry: PS00060

General information about the entry

Entry name [info] ADH_IRON_2
Accession [info] PS00060
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-NOV-1995 DATA UPDATE;
11-DEC-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC00059

Name and characterization of the entry

Description [info] Iron-containing alcohol dehydrogenases signature 2.
Pattern [info] 
[GSW]-x-[LIVTSACD]-[GH]-x(2)-[GSAE]-[GSHYQ]-x-[LIVTP]-[GAST]-[GAS]-x(3)-
[LIVMT]-x-[HNS]-[GA]-x-[GTAC].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_11 which contains 561'568 sequence entries.


Total number of hits 34 in 34 different sequences
Number of true positive hits 32 in 32 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 31
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 94.12 %
Recall (true positives / (true positives + false negatives)) 50.79 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 32 sequences 

4HDB_CLOK5  (P38945    ), ADH1_CLOSA  (P13604    ), ADH2_ECOLI  (P37686    ), 

ADH2_ENTHI  (Q24803    ), ADH2_GEOTN  (A4ISB9    ), ADH2_ZYMMA  (F8DVL8    ), 
ADH2_ZYMMO  (P0DJA2    ), ADH3_ENTHI  (Q24857    ), ADH4_SCHPO  (Q09669    ), 
ADH4_YEAS7  (A6ZTT5    ), ADH4_YEAST  (P10127    ), ADHA_CLOAB  (Q04944    ), 
ADHB_CLOAB  (Q04945    ), ADHE_ECO57  (P0A9Q8    ), ADHE_ECOLI  (P0A9Q7    ), 
DHAT_CITFR  (P45513    ), DHAT_KLEPN  (Q59477    ), EUTG_ECOLI  (P76553    ), 
EUTG_SALTY  (P41795    ), FUCO_ECO57  (P0A9S2    ), FUCO_ECOLI  (P0A9S1    ), 
GBSB_BACSU  (P71017    ), GLDA_CITFR  (P45511    ), GLDA_ECOL6  (P0A9S6    ), 
GLDA_ECOLI  (P0A9S5    ), GLDA_GEOSE  (P32816    ), GLDA_PSEPU  (P50173    ), 
GLDA_THEMA  (Q9WYQ4    ), MEDH_BACMT  (P31005    ), YQHD_ECOLI  (Q46856    ), 
YUGJ_BACSU  (O05239    ), YUGK_BACSU  (O05240    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 31 sequences 

ADH1_GEOTN  (A4IP64    ), ADHA_THEET  (Q9F282    ), ADHE_CLOAB  (P33744    ), 

CLCE_PSEAI  (O87612    ), CLCE_PSEKB  (O30847    ), HCXA_ECOLI  (P45579    ), 
HOT_AEDAE   (Q17EN4    ), HOT_ANOGA   (Q7Q547    ), HOT_BOVIN   (A6QP15    ), 
HOT_CAEBR   (A8WTJ7    ), HOT_CAEEL   (Q9U2M4    ), HOT_DICDI   (Q54GJ7    ), 
HOT_DROME   (Q9W265    ), HOT_DROPS   (Q28XT3    ), HOT_HUMAN   (Q8IWW8    ), 
HOT_MOUSE   (Q8R0N6    ), HOT_PONAB   (Q5RF11    ), HOT_RAT     (Q4QQW3    ), 
HOT_XENLA   (Q08B39    ), HOT_XENTR   (Q6P371    ), KDNB_SHEON  (Q8EEB0    ), 
LINF_SPHJU  (Q5W9E3    ), MACA1_RHOOP (O84992    ), MNO_RHOER   (Q53062    ), 
PHPC_STRVT  (D9XF45    ), TCBF_PSESQ  (P27101    ), TFDF1_CUPPJ (P27137    ), 
TFDF2_CUPPJ (P94135    ), TFDF_DELAC  (Q93T12    ), TFTE_BURCE  (Q45072    ), 
Y1167_SYNY3 (P74246    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

MACA2_RHOOP (P56870    )


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			2 sequences
			


			
CAP2_HUMAN  (P40123    ), CAP2_PONAB  (Q5R5X8    )


				
	

	

		PDB
[Detailed view]		
		
			15 PDB
			


			1JPU; 1JQ5; 1JQA; 1KQ3; 1OJ7; 1RRM; 2BI4; 2BL4; 3BFJ; 3OWO; 3OX4; 4QGS; 
			
				5BR4; 5ZXL; 6AHC
			
			

			» more

				
	





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