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Entry: PS00067 |
Entry name [info] | 3HCDH |
Accession [info] | PS00067 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00065 |
Description [info] | 3-hydroxyacyl-CoA dehydrogenase signature. |
Pattern [info] |
[DNES]-x(2)-[GA]-F-[LIVMFYA]-x-[NT]-R-x(3)-[PA]-[LIVMFY]-[LIVMFYST]- x(5,6)-[LIVMFYCT]-[LIVMFYEAH]-x(2)-[GVE]. |
Total number of hits | 220 in 220 different sequences |
Number of true positive hits | 220 in 220 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 19 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 92.05 % |
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
220 sequences
AIM1_ARATH (Q9ZPI6 ), CRYL1_BOVIN (Q8SPX7 ), CRYL1_HUMAN (Q9Y2S2 ), CRYL1_MOUSE (Q99KP3 ), CRYL1_PONAB (Q5RDZ2 ), CRYL1_RABIT (P14755 ), CRYL1_RAT (Q811X6 ), ECHA_HUMAN (P40939 ), ECHA_MOUSE (Q8BMS1 ), ECHA_PIG (Q29554 ), ECHA_RAT (Q64428 ), ECHP_DANRE (Q6NYL3 ), ECHP_HUMAN (Q08426 ), ECHP_MOUSE (Q9DBM2 ), ECHP_PONAB (Q5R5M8 ), ECHP_RAT (P07896 ), FADB_ACIAD (Q6FF68 ), FADB_ACIB3 (B7H1I0 ), FADB_ACIB5 (B7I3P1 ), FADB_ACIBC (B2I2J9 ), FADB_ACIBS (B0VLX4 ), FADB_ACIBY (B0VE45 ), FADB_AERHH (A0KEL1 ), FADB_AERS4 (A4STF2 ), FADB_ALIF1 (Q5E8X6 ), FADB_ALIFM (B5FEW8 ), FADB_ALISL (B6EGU2 ), FADB_CITK8 (A8ACZ4 ), FADB_COLP3 (Q489W3 ), FADB_CROS8 (A7MQP0 ), FADB_ECO24 (A7ZU51 ), FADB_ECO27 (B7UNH4 ), FADB_ECO45 (B7MHD1 ), FADB_ECO55 (B7L9A7 ), FADB_ECO57 (Q8X8I2 ), FADB_ECO5E (B5YY93 ), FADB_ECO7I (B7NV20 ), FADB_ECO81 (B7N2F2 ), FADB_ECO8A (B7M649 ), FADB_ECOBW (C5A020 ), FADB_ECODH (B1XAK8 ), FADB_ECOHS (A8A6V1 ), FADB_ECOL5 (Q0TAL0 ), FADB_ECOL6 (Q8FBI2 ), FADB_ECOLC (B1IW61 ), FADB_ECOLI (P21177 ), FADB_ECOLU (B7NFE7 ), FADB_ECOSE (B6I4I6 ), FADB_ECOSM (B1LM32 ), FADB_ECOUT (Q1R466 ), FADB_ENT38 (A4WFX4 ), FADB_ENTCL (Q9F0Y7 ), FADB_ESCF3 (B7LTY9 ), FADB_IDILO (Q5QXH7 ), FADB_KLEP3 (B5XYH0 ), FADB_KLEP7 (A6TGM4 ), FADB_PECAS (Q6DAP5 ), FADB_PHOLL (Q7MZ92 ), FADB_PHOPR (Q6LW06 ), FADB_PSE14 (Q48GW3 ), FADB_PSEA7 (A6V382 ), FADB_PSEA8 (B7UYR6 ), FADB_PSEAB (Q02PH8 ), FADB_PSEAE (Q9HZJ2 ), FADB_PSEE4 (Q1I7D4 ), FADB_PSEF5 (Q4KFC4 ), FADB_PSEFR (P28793 ), FADB_PSEFS (C3K613 ), FADB_PSEMY (A4XSM8 ), FADB_PSEOL (Q93Q12 ), FADB_PSEP1 (A5W6H0 ), FADB_PSEPF (Q3K9D8 ), FADB_PSEPG (B0KH74 ), FADB_PSEPK (Q88L02 ), FADB_PSEPU (Q9AHY3 ), FADB_PSEPW (B1J5A5 ), FADB_PSESM (Q87ZB2 ), FADB_PSEU2 (Q4ZRA0 ), FADB_PSEU5 (A4VKA3 ), FADB_PSYA2 (Q4FQC6 ), FADB_PSYCK (Q1Q8J9 ), FADB_PSYWF (A5WH99 ), FADB_SALA4 (B5EZW0 ), FADB_SALCH (Q57HM6 ), FADB_SALEP (B5QW85 ), FADB_SALG2 (B5RFL6 ), FADB_SALNS (B4SZ85 ), FADB_SALPA (Q5PKQ2 ), FADB_SALPB (A9MYB0 ), FADB_SALPK (B5BIZ0 ), FADB_SALSV (B4TNZ1 ), FADB_SALTI (Q8Z3C6 ), FADB_SALTY (Q9L6L5 ), FADB_SERP5 (A8G8D1 ), FADB_SHEAM (A1S1I8 ), FADB_SHEB2 (B8E3R3 ), FADB_SHEB5 (A3CYJ4 ), FADB_SHEB8 (A6WHA0 ), FADB_SHEB9 (A9KU91 ), FADB_SHEFN (Q08A39 ), FADB_SHEHH (B0TLB9 ), FADB_SHELP (A3Q8U4 ), FADB_SHEON (Q8EKR9 ), FADB_SHEPA (A8GYG0 ), FADB_SHEPC (A4Y1B6 ), FADB_SHEPW (B8CH91 ), FADB_SHESA (A0KR50 ), FADB_SHESH (A8FP63 ), FADB_SHESM (Q0HPB7 ), FADB_SHESR (Q0I0T3 ), FADB_SHESW (A1RDW6 ), FADB_SHEWM (B1KCZ3 ), FADB_SHIB3 (B2TVJ5 ), FADB_SHIDS (Q32A21 ), FADB_SHIF8 (Q0SZ36 ), FADB_SHIFL (Q83PG1 ), FADB_SHISS (Q3YVC1 ), FADB_VIBA3 (B7VGL4 ), FADB_VIBC3 (A5F465 ), FADB_VIBCB (A7N1D2 ), FADB_VIBCH (Q9KNI1 ), FADB_VIBCM (C3LSI3 ), FADB_VIBPA (Q87TN9 ), FADB_VIBVU (Q8DDK6 ), FADB_VIBVY (Q7MQH9 ), FADB_YERE8 (A1JIG4 ), FADB_YERP3 (A7FDF2 ), FADB_YERPA (Q1C2C4 ), FADB_YERPB (B2K0Z6 ), FADB_YERPE (Q8ZAN0 ), FADB_YERPG (A9R754 ), FADB_YERPN (Q1CN99 ), FADB_YERPP (A4TR27 ), FADB_YERPS (Q66FR8 ), FADB_YERPY (B1JP63 ), FADJ_ALIF1 (Q5E3U1 ), FADJ_CITK8 (A8ADP2 ), FADJ_CROS8 (A7MH81 ), FADJ_ECO24 (A7ZPF8 ), FADJ_ECO27 (B7UFZ8 ), FADJ_ECO45 (B7MGV7 ), FADJ_ECO55 (B7LBJ5 ), FADJ_ECO57 (Q8XCP2 ), FADJ_ECO5E (B5YXY4 ), FADJ_ECO7I (B7NP24 ), FADJ_ECO81 (B7MY16 ), FADJ_ECO8A (B7M6M2 ), FADJ_ECOBW (C4ZVN2 ), FADJ_ECODH (B1X9L4 ), FADJ_ECOHS (A8A2L0 ), FADJ_ECOK1 (A1ADI8 ), FADJ_ECOL5 (Q0TFA6 ), FADJ_ECOL6 (Q8FFG4 ), FADJ_ECOLC (B1IXA5 ), FADJ_ECOLI (P77399 ), FADJ_ECOLU (B7N5V2 ), FADJ_ECOSE (B6I6Q4 ), FADJ_ECOSM (B1LME7 ), FADJ_ECOUT (Q1R972 ), FADJ_ENT38 (A4WCW6 ), FADJ_ESCF3 (B7LLD0 ), FADJ_IDILO (Q5QXM1 ), FADJ_KLEP3 (B5XVW2 ), FADJ_KLEP7 (A6TC19 ), FADJ_PECAS (Q6D2L7 ), FADJ_PECCP (C6DAL7 ), FADJ_PHOLL (Q7N288 ), FADJ_PHOPR (Q6LTK3 ), FADJ_SALA4 (B5EZR9 ), FADJ_SALCH (Q57LW6 ), FADJ_SALDC (B5FPN1 ), FADJ_SALEP (B5R3R9 ), FADJ_SALG2 (B5RCL3 ), FADJ_SALHS (B4TCA8 ), FADJ_SALNS (B4SZR0 ), FADJ_SALPA (Q5PCX6 ), FADJ_SALPB (A9N453 ), FADJ_SALPK (B5BBA1 ), FADJ_SALSV (B4TQC2 ), FADJ_SALTI (Q8Z4Z0 ), FADJ_SALTY (Q8ZNA7 ), FADJ_SERP5 (A8GH86 ), FADJ_SHIB3 (B2TWV4 ), FADJ_SHIBS (Q31YB7 ), FADJ_SHIDS (Q32DJ4 ), FADJ_SHIF8 (Q0T2E6 ), FADJ_SHIFL (Q83QQ0 ), FADJ_SHISS (Q3YZM2 ), FADJ_VIBC3 (A5F2P2 ), FADJ_VIBCB (A7MS61 ), FADJ_VIBCH (Q9KT58 ), FADJ_VIBPA (Q87MM3 ), FADJ_VIBVU (Q8DB47 ), FADJ_VIBVY (Q7MIS5 ), FADJ_YERE8 (A1JK30 ), FADJ_YERP3 (A7FGK1 ), FADJ_YERPA (Q1C660 ), FADJ_YERPE (Q8ZD45 ), FADJ_YERPN (Q1CHK2 ), FADJ_YERPP (A4TM82 ), FADJ_YERPS (Q668V1 ), FHMCD_RHILO (Q988C8 ), HBD_BACSU (P45856 ), HBD_BRADU (Q45223 ), HBD_CLOAB (P52041 ), HBD_CLODI (P45364 ), HBD_DEIRA (Q9RVG1 ), HBD_SYNWW (Q0AVM2 ), HBD_THETC (P77851 ), HCDH1_CAEEL (P34439 ), HCDH2_CAEEL (P41938 ), HCDH_HUMAN (Q16836 ), HCDH_MOUSE (Q61425 ), HCDH_PIG (P00348 ), HCDH_RAT (Q9WVK7 ), MFP2_ARATH (Q9ZPI5 ), MFPA_BRANA (O49809 ), MFPA_CUCSA (Q39659 ), MFP_ORYSJ (Q8W1L6 ), PAAH_ECOLI (P76083 )» more
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UniProtKB/Swiss-Prot False negative sequences |
19 sequences
CRYL1_PIG (Q8SQ26 ), FAD3_RICFE (Q4UL32 ), FAD3_RICPR (Q9ZCZ1 ), FAD3_RICTY (Q68WH7 ), FADB2_MYCTO (P9WNP6 ), FADB2_MYCTU (P9WNP7 ), FADJ_SHEAM (A1S7L6 ), FADJ_SHEB5 (A3D684 ), FADJ_SHEB8 (A6WQ25 ), FADJ_SHEFN (Q07ZP8 ), FADJ_SHEHH (B0TL21 ), FADJ_SHELP (A3QFP3 ), FADJ_SHEON (Q8ECP7 ), FADJ_SHEPC (A4Y897 ), FADJ_SHESA (A0KV76 ), FADJ_SHESM (Q0HKD1 ), FADJ_SHESR (Q0HWN3 ), FADJ_SHESW (A1RI92 ), HCDH_DEIRA (P83589 )» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
HBD_CLOPA (P81343 ) |
PDB [Detailed view] |
39 PDB
1F0Y; 1F12; 1F14; 1F17; 1IL0; 1LSJ; 1LSO; 1M76; 1WDK; 1WDL; 1WDM; 1ZCJ; 2D3T; 2HDH; 2WTB; 2X58; 3ADO; 3ADP; 3F3S; 3HAD; 3HDH; 3MOG; 3RQS; 3ZW8; 3ZW9; 3ZWA; 3ZWB; 3ZWC; 4J0E; 4J0F; 4OM8; 5MGB; 5OMO; 5ZQZ; 5ZRV; 6AA8; 6ACQ; 6DV2; 6TNM » more |