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| Entry: PS00071 |
General information about the entry
| Entry name [info] | GAPDH |
| Accession [info] | PS00071 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE; 22-FEB-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00069 |
| Associated ProRule [info] | PRU10009 |
Name and characterization of the entry
| Description [info] | Glyceraldehyde 3-phosphate dehydrogenase active site. |
| Pattern [info] |
[ASV]-S-C-[NT]-T-{S}-x-[LIM].
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Numerical results [info]
| Total number of hits | 403 in 403 different sequences |
| Number of true positive hits | 393 in 393 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 10 in 10 different sequences |
| Number of false negative sequences | 25 |
| Number of 'partial' sequences | 9 |
| Precision (true positives / (true positives + false positives)) | 97.52 % |
| Recall (true positives / (true positives + false negatives)) | 94.02 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Site [info] | active_site at position 3 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
393 sequences
E4PD_CITK8 (A8APE1 ), E4PD_CROS8 (A7MJQ2 ), E4PD_ECO24 (A7ZR35 ), E4PD_ECO27 (B7UHW9 ), E4PD_ECO45 (B7MMA9 ), E4PD_ECO55 (B7LFI3 ), E4PD_ECO57 (P0A9B8 ), E4PD_ECO5E (B5YQB9 ), E4PD_ECO7I (B7NHY6 ), E4PD_ECO81 (B7MZM0 ), E4PD_ECO8A (B7LYU4 ), E4PD_ECOBW (C5A0J7 ), E4PD_ECODH (B1XEL0 ), E4PD_ECOHS (A8A467 ), E4PD_ECOK1 (A1AFB1 ), E4PD_ECOL5 (Q0TDS9 ), E4PD_ECOL6 (P0A9B7 ), E4PD_ECOLC (B1IT76 ), E4PD_ECOLI (P0A9B6 ), E4PD_ECOLU (B7N7H3 ), E4PD_ECOSE (B6I761 ), E4PD_ECOSM (B1LDD2 ), E4PD_ECOUT (Q1R7A6 ), E4PD_EDWI9 (C5BAU7 ), E4PD_ENT38 (A4WE72 ), E4PD_ERWT9 (B2VF24 ), E4PD_ESCF3 (B7LPD5 ), E4PD_KLEP3 (B5XUB7 ), E4PD_KLEP7 (A6TDT2 ), E4PD_PECAS (Q6D086 ), E4PD_PECCP (C6DFH8 ), E4PD_PHOLL (Q7N7Z6 ), E4PD_PROMH (B4EUH7 ), E4PD_PSYIN (A1SVN9 ), E4PD_SALA4 (B5F5J5 ), E4PD_SALAR (A9MRF0 ), E4PD_SALCH (Q57K44 ), E4PD_SALDC (B5FUI3 ), E4PD_SALEP (B5QXJ7 ), E4PD_SALG2 (B5RE31 ), E4PD_SALHS (B4THF4 ), E4PD_SALNS (B4T5H2 ), E4PD_SALPA (Q5PJI5 ), E4PD_SALPB (A9N3Q6 ), E4PD_SALPC (C0PY46 ), E4PD_SALPK (B5BFN5 ), E4PD_SALSV (B4TV39 ), E4PD_SALTI (Q8XGA4 ), E4PD_SALTY (Q7CPU5 ), E4PD_SHEAM (A1S9A4 ), E4PD_SHEB2 (B8E5U5 ), E4PD_SHEDO (Q12QA4 ), E4PD_SHEFN (Q087Q7 ), E4PD_SHEHH (B0TUC0 ), E4PD_SHELP (A3QAX7 ), E4PD_SHEON (Q8EIB2 ), E4PD_SHEPA (A8H0M9 ), E4PD_SHEPC (A4Y3R9 ), E4PD_SHEPW (B8CU41 ), E4PD_SHESA (A0L0K7 ), E4PD_SHESM (Q0HM63 ), E4PD_SHESR (Q0HRM3 ), E4PD_SHESW (A1RN69 ), E4PD_SHIB3 (B2U0U3 ), E4PD_SHIBS (Q31WI6 ), E4PD_SHIDS (Q32BY7 ), E4PD_SHIF8 (Q0T0X3 ), E4PD_SHIFL (P0A9B9 ), E4PD_SHISS (Q3YXU5 ), E4PD_YERE8 (A1JPR1 ), E4PD_YERPA (Q1CB62 ), E4PD_YERPE (Q7CGS4 ), E4PD_YERPN (Q1CEY2 ), E4PD_YERPS (Q666Q0 ), G3P1_AGABI (P32635 ), G3P1_BACCE (Q4MQ58 ), G3P1_BACSU (P09124 ), G3P1_CAEEL (P04970 ), G3P1_CANGB (Q6FPW3 ), G3P1_DROME (P07486 ), G3P1_ECO57 (P0A9B4 ), G3P1_ECOLI (P0A9B2 ), G3P1_GIAIN (P53429 ), G3P1_GLORO (O16027 ), G3P1_KLULC (P17819 ), G3P1_KLUMA (P84998 ), G3P1_METAC (P58837 ), G3P1_METBF (Q46AH5 ), G3P1_MUCCL (Q9C136 ), G3P1_NOSS1 (P80506 ), G3P1_SCHPO (P78958 ), G3P1_STAAC (Q5HHP5 ), G3P1_STAAM (P0A036 ), G3P1_STAAN (P99136 ), G3P1_STAAR (Q6GIL8 ), G3P1_STAAS (Q6GB58 ), G3P1_STAAW (P0A037 ), G3P1_STAEQ (Q5HQV4 ), G3P1_STAES (Q8CPY5 ), G3P1_STRAE (P54226 ), G3P1_STRAW (Q82IZ2 ), G3P1_SYNY3 (P49433 ), G3P1_TRIKO (P17729 ), G3P1_TRIV2 (P34916 ), G3P1_YEAST (P00360 ), G3P2_AGABI (P32636 ), G3P2_BACSU (O34425 ), G3P2_CAEBR (P32809 ), G3P2_CAEEL (P17329 ), G3P2_CANGB (Q6FSM4 ), G3P2_DANRE (Q5MJ86 ), G3P2_DROME (P07487 ), G3P2_DROPS (O44104 ), G3P2_DROSU (O44105 ), G3P2_ECO57 (P58072 ), G3P2_KLULC (Q6CX23 ), G3P2_KLUMA (Q01077 ), G3P2_METAC (P58838 ), G3P2_METBF (Q465K9 ), G3P2_MUCCL (Q96UF2 ), G3P2_NOSS1 (P58554 ), G3P2_SCHPO (O43026 ), G3P2_STAAC (Q5HF86 ), G3P2_STAAM (P64180 ), G3P2_STAAN (P99067 ), G3P2_STAAR (Q6GG19 ), G3P2_STAAS (Q6G8N9 ), G3P2_STAAW (P64181 ), G3P2_STAEQ (Q5HNL7 ), G3P2_STAES (Q8CNY0 ), G3P2_STRAE (E3VWI2 ), G3P2_SYNY3 (P80505 ), G3P2_TRIKO (P17730 ), G3P2_TRIV2 (P34917 ), G3P2_YEAST (P00358 ), G3P3_CAEBR (P32810 ), G3P3_CAEEL (P17330 ), G3P3_KLUMA (P84999 ), G3P3_MUCCL (Q96UF1 ), G3P3_NOSS1 (P58559 ), G3P3_TRIV2 (P34918 ), G3P3_YEAST (P00359 ), G3P4_CAEEL (P17331 ), G3PA1_ARATH (P25856 ), G3PA2_ARATH (Q9LPW0 ), G3PA_CHLRE (P50362 ), G3PA_CHOCR (P34919 ), G3PA_GRAGA (P30724 ), G3PA_GUITH (O09452 ), G3PA_MAIZE (P09315 ), G3PA_PEA (P12858 ), G3PA_SCEVA (Q8VXQ9 ), G3PA_SINAL (P09672 ), G3PA_SPIOL (P19866 ), G3PA_TOBAC (P09043 ), G3PB_ARATH (P25857 ), G3PB_PEA (P12859 ), G3PB_SPIOL (P12860 ), G3PB_TOBAC (P09044 ), G3PC1_ARATH (P25858 ), G3PC1_HORVU (P26517 ), G3PC1_MAIZE (P08735 ), G3PC1_ORYSJ (Q0J8A4 ), G3PC2_ARATH (Q9FX54 ), G3PC2_MAIZE (Q09054 ), G3PC2_ORYSJ (Q7FAH2 ), G3PC3_MAIZE (Q43247 ), G3PC3_ORYSJ (Q6K5G8 ), G3PC_ANTMA (P25861 ), G3PC_CHLRE (P49644 ), G3PC_CHOCR (P34920 ), G3PC_CRAPL (Q42671 ), G3PC_CUPNH (P50321 ), G3PC_DIACA (P34921 ), G3PC_GINBI (Q39769 ), G3PC_GRAGA (P54270 ), G3PC_LEIME (Q01558 ), G3PC_MAGLI (P26518 ), G3PC_MESCR (P17878 ), G3PC_ORYSI (A2YQT7 ), G3PC_PEA (P34922 ), G3PC_PETCR (P26519 ), G3PC_PETHY (P26520 ), G3PC_PHYPA (P34923 ), G3PC_PINSY (P34924 ), G3PC_RANAC (P26521 ), G3PC_SCEVA (Q8VXQ8 ), G3PC_SINAL (P04796 ), G3PC_TAXBA (Q41595 ), G3PC_TOBAC (P09094 ), G3PC_TRYBB (P10097 ), G3PG_CRIFA (O96423 ), G3PG_LEIME (Q27890 ), G3PG_TRYBB (P22512 ), G3PG_TRYCR (P22513 ), G3PP1_ARATH (Q9SAJ6 ), G3PP2_ARATH (Q5E924 ), G3PP_CUPNH (P50322 ), G3PT_BOVIN (Q2KJE5 ), G3PT_HUMAN (O14556 ), G3PT_MACFA (Q4R3T1 ), G3PT_MOUSE (Q64467 ), G3PT_RAT (Q9ESV6 ), G3P_AERPE (Q9YFS9 ), G3P_AJECA (Q9HFX1 ), G3P_AMAMU (P55071 ), G3P_AQUAE (O67161 ), G3P_ARCFU (O28542 ), G3P_ASHGO (Q757I2 ), G3P_ASPNG (Q12552 ), G3P_ASPOR (Q9HGY7 ), G3P_ATLHE (P24750 ), G3P_ATRNU (P34783 ), G3P_BACFR (Q59199 ), G3P_BLUHO (Q00640 ), G3P_BOLED (Q00301 ), G3P_BORBU (P46795 ), G3P_BORHE (P46796 ), G3P_BOVIN (P10096 ), G3P_BRUMA (P48812 ), G3P_BUCAI (P57384 ), G3P_BUCAP (Q07234 ), G3P_BUCBP (Q89AK1 ), G3P_CANAW (Q92211 ), G3P_CANLF (Q28259 ), G3P_CERSP (P29272 ), G3P_CHICK (P00356 ), G3P_CHLMU (Q9PJN6 ), G3P_CHLPN (Q9Z7T0 ), G3P_CHLT2 (B0B879 ), G3P_CHLTR (P0CE13 ), G3P_CITFR (P24748 ), G3P_CLAP2 (Q00584 ), G3P_CLOAB (O52631 ), G3P_CLOPA (Q59309 ), G3P_COCHE (P29497 ), G3P_COCIM (Q1DTF9 ), G3P_COCLU (P28844 ), G3P_COCP7 (Q8J1H3 ), G3P_COLGL (P35143 ), G3P_COLLI (O57479 ), G3P_COLLN (P54117 ), G3P_CORGL (Q01651 ), G3P_COTJA (Q05025 ), G3P_CRIGR (P17244 ), G3P_CRYNB (P0CN75 ), G3P_CRYNJ (P0CN74 ), G3P_CRYPA (P19089 ), G3P_CUTCU (Q9Y796 ), G3P_DANRE (Q5XJ10 ), G3P_DEBHA (Q6BMK0 ), G3P_DICDI (Q94469 ), G3P_DROHY (Q01597 ), G3P_ECHMU (Q27652 ), G3P_ECOL6 (P0A9B3 ), G3P_EMENI (P20445 ), G3P_ESCF3 (B7LQ20 ), G3P_ESCFE (P0C8Z1 ), G3P_FELCA (Q9N2D5 ), G3P_GEOSE (P00362 ), G3P_GLOMM (Q4U3L0 ), G3P_HAEIN (P44304 ), G3P_HALMA (Q5V061 ), G3P_HALS3 (B0R2M2 ), G3P_HALSA (Q9HSS7 ), G3P_HALVA (Q48335 ), G3P_HELPJ (Q9ZKT0 ), G3P_HELPY (P55971 ), G3P_HOMAM (P00357 ), G3P_HUMAN (P04406 ), G3P_HYPAT (P87197 ), G3P_HYPBU (A2BLC6 ), G3P_JACOR (P80534 ), G3P_KITAU (Q59800 ), G3P_KLEPN (P24164 ), G3P_LACDT (P55070 ), G3P_LENED (Q9UR38 ), G3P_LYOSH (Q92243 ), G3P_MASBA (Q9N655 ), G3P_MESAU (P51640 ), G3P_META3 (A6UUN9 ), G3P_METB6 (A7IB57 ), G3P_METBR (P19314 ), G3P_METBU (Q12XM4 ), G3P_METFE (P10618 ), G3P_METFO (P19315 ), G3P_METHJ (Q2FNA2 ), G3P_METJA (Q58546 ), G3P_METKA (P58839 ), G3P_METM5 (A4FZL2 ), G3P_METM6 (A9A6M9 ), G3P_METM7 (A6VIW4 ), G3P_METMA (Q8PTD3 ), G3P_METMP (Q6M0E6 ), G3P_METS3 (A5ULT9 ), G3P_METS5 (A4YHA5 ), G3P_METST (Q2NEN0 ), G3P_METTH (O27090 ), G3P_METVS (A6URW1 ), G3P_MONPU (P53430 ), G3P_MOUSE (P16858 ), G3P_MUSPF (A3FKF7 ), G3P_MYCAV (P94915 ), G3P_MYCBO (P64179 ), G3P_MYCBP (A0A0H3MAB5), G3P_MYCGE (P47543 ), G3P_MYCLE (P46713 ), G3P_MYCPN (P75358 ), G3P_MYCS2 (A0QWW2 ), G3P_MYCTO (P9WN82 ), G3P_MYCTU (P9WN83 ), G3P_NATPD (Q3IUT3 ), G3P_NEUCR (P54118 ), G3P_OGAPD (O59841 ), G3P_OMPOL (Q8TFJ2 ), G3P_ONCMY (O42259 ), G3P_ONCVO (O01360 ), G3P_PANVR (P56649 ), G3P_PARBA (Q8X1X3 ), G3P_PELSI (Q5R2J2 ), G3P_PHACH (Q01982 ), G3P_PHANO (Q9P8C0 ), G3P_PHARH (O13507 ), G3P_PHYIN (P26988 ), G3P_PICPA (Q92263 ), G3P_PICTO (Q6L125 ), G3P_PIG (P00355 ), G3P_PODAS (P32637 ), G3P_PONAB (Q5RAB4 ), G3P_PRIM3 (P23722 ), G3P_PSEAE (P27726 ), G3P_PSEVU (P24751 ), G3P_PYRAB (Q9V1P1 ), G3P_PYRAE (Q8ZWK7 ), G3P_PYRAR (A4WIW2 ), G3P_PYRCJ (A3MTU1 ), G3P_PYRFU (P61879 ), G3P_PYRHO (O59494 ), G3P_PYRIL (A1RV79 ), G3P_PYRNV (B1YD06 ), G3P_PYRWO (P61880 ), G3P_RABIT (P46406 ), G3P_RALSO (P52694 ), G3P_RAT (P04797 ), G3P_RHIMI (Q8NK47 ), G3P_SACS2 (P39460 ), G3P_SALTI (P0A1P1 ), G3P_SALTY (P0A1P0 ), G3P_SCHCO (P32638 ), G3P_SCHMA (P20287 ), G3P_SCLSC (Q96US8 ), G3P_SERMA (P24166 ), G3P_SEROD (P24753 ), G3P_SHEEP (Q28554 ), G3P_SHIBC (I2BA89 ), G3P_SHIBL (P0DJO7 ), G3P_SHIFL (P0A9B5 ), G3P_SORMA (Q8WZN0 ), G3P_SPECI (Q4KYY3 ), G3P_STAAU (P0A038 ), G3P_STREQ (Q59906 ), G3P_STRP1 (P0C0G7 ), G3P_STRP3 (P0DB18 ), G3P_STRP6 (Q5XDW3 ), G3P_STRP8 (P68777 ), G3P_STRPQ (P0DB19 ), G3P_STRPY (P0C0G6 ), G3P_SULAC (Q4J940 ), G3P_SULIA (C3N6F0 ), G3P_SULIK (C4KHW5 ), G3P_SULIL (C3MQN0 ), G3P_SULIM (C3MWN0 ), G3P_SULIN (C3NGT6 ), G3P_SULIY (C3NEV8 ), G3P_SULTO (Q971K2 ), G3P_THEAC (Q9HJ69 ), G3P_THEAQ (P00361 ), G3P_THEKO (Q5JHB5 ), G3P_THEMA (P17721 ), G3P_THEON (B6YUU0 ), G3P_THESM (C6A312 ), G3P_THEVO (Q97BJ8 ), G3P_TREPA (O83816 ), G3P_USTMA (P09317 ), G3P_WEICA (P15115 ), G3P_WICCI (Q9UVC0 ), G3P_XANFL (P51009 ), G3P_XENLA (P51469 ), G3P_YARLI (Q6CCU7 ), G3P_ZYGRO (P08439 ), G3P_ZYMMO (P09316 ), GAP2_PSEAB (Q02PG5 ), HEPG_ASPOR (Q2U0J7 )» more
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| UniProtKB/Swiss-Prot False negative sequences |
25 sequences
E4PD_AERHH (A0KGD2 ), E4PD_AERS4 (A4SRF2 ), E4PD_ALIF1 (Q5E7R0 ), E4PD_ALIFM (B5F9T4 ), E4PD_ALISL (B6EMW1 ), E4PD_ALTMD (B4RWC5 ), E4PD_COLP3 (Q47XD5 ), E4PD_IDILO (Q5QVL6 ), E4PD_PHOPR (Q6LMN0 ), E4PD_PSEA6 (Q15QK3 ), E4PD_PSET1 (Q3ILL8 ), E4PD_TOLAT (C4L9J3 ), E4PD_VIBC1 (A7MTQ2 ), E4PD_VIBC3 (A5F9G1 ), E4PD_VIBCH (P0C6C2 ), E4PD_VIBPA (Q87LL0 ), E4PD_VIBVU (Q8DCA1 ), E4PD_VIBVY (Q7MHL0 ), G3P_KLEAE (P24163 ), G3P_LACDE (O32755 ), G3P_LACLA (P52987 ), G3P_MELGA (O57672 ), G3P_METMJ (A3CYG8 ), G3P_PLESA (Q9UW96 ), G3P_STRCO (Q9Z518 )» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
9 sequences
G3P2_BACCE (P83077 ), G3PB_POPEU (P84544 ), G3PC2_HORVU (P08477 ), G3PC_PSEMZ (P85954 ), G3PT_MESAU (P86211 ), G3P_CAVPO (P70685 ), G3P_CHAMQ (C0HLQ6 ), G3P_NAEFO (P83601 ), PS5_PINST (P84721 )» more |
| UniProtKB/Swiss-Prot False positive sequences |
10 sequences
BLAA_STRCI (P33651 ), CARL1_MOUSE (Q6EDY6 ), DDB1_DROME (Q9XYZ5 ), ERYA1_SACER (Q03131 ), MATK_VACFA (Q6E4Q3 ), PGLR1_COLLN (Q00446 ), SIBD_DICDI (Q54JA4 ), SIK3_DANRE (Q6NSM8 ), TGFB3_CHICK (P16047 ), XYLT_DROME (Q7KVA1 )» more |
| PDB [Detailed view] |
121 PDB
1A7K; 1B7G; 1CER; 1CF2; 1CRW; 1DBV; 1DC3; 1DC4; 1DC5; 1DC6; 1DSS; 1GAD; 1GAE; 1GD1; 1GPD; 1GYP; 1GYQ; 1HDG; 1I32; 1I33; 1IHX; 1IHY; 1J0X; 1JN0; 1K3T; 1ML3; 1NBO; 1QXS; 1RM3; 1RM4; 1RM5; 1S7C; 1SZJ; 1U8F; 1ZNQ; 2CZC; 2DBV; 2EP7; 2G82; 2GD1; 2HKI; 2I5P; 2PKQ; 2PKR; 2VYN; 2VYV; 2X0N; 2X5J; 2XF8; 2YYY; 3CMC; 3DBV; 3DMT; 3E5R; 3E6A; 3GPD; 3H9E; 3HJA; 3IDS; 3K2B; 3K73; 3L6O; 3LC1; 3LC2; 3LC7; 3LVF; 3PFW; 3PYM; 3QV1; 3RVD; 3V1Y; 3VAZ; 4DBV; 4GPD; 4IQ8; 4K9D; 4O59; 4O63; 4WNC; 4WNI; 4Z0H; 5C7I; 5C7L; 5C7O; 5DDI; 5T73; 5TSO; 5ZA0; 6ADE; 6FZH; 6IO4; 6IO6; 6IOJ; 6IQ6; 6ITE; 6KEZ; 6LGJ; 6M61; 6OK4; 6QUN; 6QUQ; 6UTM; 6UTN; 6UTO; 6WYC; 6X2E; 6YND; 6YNE; 6YNF; 6YNH; 7JH0; 7Q53; 7Q54; 7Q55; 7Q56; 7Q57; 7U4S; 7ZQ3; 7ZQ4; 7ZQK; 8DNS » more |
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission