We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
PROSITE entry PS00076
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PURL: https://purl.expasy.org/prosite/signature/PS00076
Direct ScanProsite submission
General information about the entry
| Entry name [info] | PYRIDINE_REDOX_1 |
| Accession [info] | PS00076 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-OCT-1993 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00073 |
Name and characterization of the entry
| Description [info] | Pyridine nucleotide-disulphide oxidoreductases class-I active site. |
| Pattern [info] |
G-G-x-C-[LIVA]-x(2)-G-C-[LIVM]-P. |
Numerical results [info]
| Total number of hits | 150 in 150 different sequences |
| Number of true positive hits | 150 in 150 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 1 |
| Number of 'partial' sequences | 3 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 99.34 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Site [info] | disulfide at position 4 |
| Site [info] | disulfide at position 8 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
150 sequences
DLDH1_ARATH (Q9M5K3), DLDH1_BACSU (P21880), DLDH1_GEOSE (P11959), DLDH1_PSEAE (Q9I1L9), DLDH1_PSEPU (P09063), DLDH2_ARATH (Q9M5K2), DLDH2_BACSU (P54533), DLDH2_HALMA (Q5UYG6), DLDH2_PSEAE (Q9I3D1), DLDH2_PSEPU (P31052), DLDH3_BACSU (O34324), DLDH3_HALMA (Q5UWH2), DLDH3_PSEAE (Q9HUY1), DLDH3_PSEPU (P31046), DLDH_ACHLA (P35484), DLDH_AZOVI (P18925), DLDH_BOVIN (F1N206), DLDH_BUCAI (P57303), DLDH_BUCAP (Q8K9T7), DLDH_BUCBP (Q89AQ8), DLDH_CAEEL (O17953), DLDH_CANLF (P49819), DLDH_CHATD (G0SB20), DLDH_CHLMU (Q9PJI3), DLDH_CHLP8 (O50311), DLDH_CHLPN (Q9Z773), DLDH_CHLTE (Q8KCW2), DLDH_CHLTR (O84561), DLDH_CORGL (Q8NTE1), DLDH_CRIGR (Q8CIZ7), DLDH_CUPNH (P52992), DLDH_DICDI (Q54EW8), DLDH_ECO57 (P0A9P2), DLDH_ECOL6 (P0A9P1), DLDH_ECOLI (P0A9P0), DLDH_HAEIN (P43784), DLDH_HALSA (Q9HN74), DLDH_HALVD (Q04829), DLDH_HUMAN (P09622), DLDH_HYMDI (P80647), DLDH_MACFA (Q60HG3), DLDH_MANSE (O18480), DLDH_MESAU (Q811C4), DLDH_MOUSE (O08749), DLDH_MYCBO (P66005), DLDH_MYCGE (P47513), DLDH_MYCLE (Q50068), DLDH_MYCPN (P75393), DLDH_MYCTO (P9WHH8), DLDH_MYCTU (P9WHH9), DLDH_PEA(P31023), DLDH_PIG(P09623), DLDH_PONAB (Q5R4B1), DLDH_PSEFL (P14218), DLDH_RAT(Q6P6R2), DLDH_RHIEC (O05940), DLDH_RHOCA (P95596), DLDH_SCHPO (O00087), DLDH_SHIFL (P0A9P3), DLDH_STAAC (Q5HGY8), DLDH_STAAM (P0A0E6), DLDH_STAAN (P99084), DLDH_STAAR (Q6GHY9), DLDH_STAAS (Q6GAB8), DLDH_STAAU (P0A0E8), DLDH_STAAW (P0A0E7), DLDH_SYNY3 (P72740), DLDH_THESS (P85207), DLDH_TRYBB (Q04933), DLDH_TRYCR (P90597), DLDH_VIBCH (Q9KPF6), DLDH_VIBPA (O50286), DLDH_YEAST (P09624), DLDH_ZYMMO (P50970), GASHR_MARGR (D0VWY5), GSHRC_ARATH (P48641), GSHRC_BRARP (O04955), GSHRC_ORYSJ (P48642), GSHRC_PEA (Q43621), GSHRP_ARATH (P42770), GSHRP_PEA (P27456), GSHRP_SOYBN (P48640), GSHRP_SPIOL (Q43154), GSHRP_TOBAC (P80461), GSHR_BURCE (P48639), GSHR_CAEEL (Q93379), GSHR_CALJA (A2TIL1), GSHR_CANGA (Q6FRV2), GSHR_DEBHA (Q6BPI1), GSHR_DICDI (Q8T137), GSHR_ECOLI (P06715), GSHR_EREGS (Q74ZK4), GSHR_HAEIN (P43783), GSHR_HUMAN (P00390), GSHR_KLULA (Q6HA23), GSHR_MOUSE (P47791), GSHR_NEUCR (Q873E8), GSHR_NOSS1 (P48638), GSHR_PLAF7 (O15770), GSHR_PLAFK (Q94655), GSHR_PSEAE (P23189), GSHR_SCHPO (P78965), GSHR_SPISP (P11804), GSHR_STRTR (Q60151), GSHR_YARLI (Q6C5H4), GSHR_YEAST (P41921), LEGRE_SOYBN (Q41219), LEGRE_VIGUN (Q9SPB1), MERA_ACICA (Q52109), MERA_ACIFR (P17239), MERA_ALCSP (P94188), MERA_BACCE (P16171), MERA_ENTAG (P94702), MERA_LYSSH (D9J041), MERA_PSEAI (P00392), MERA_PSEFL (Q51772), MERA_SERMA (P08662), MERA_SHEPU (Q54465), MERA_SHIFL (P08332), MERA_STAAU (P0A0E5), MERA_STAES (P0A0E4), MERA_STRLI (P30341), MTR_MYCTO (P9WHH2), MTR_MYCTU (P9WHH3), PLPD1_ARATH (A8MS68), PLPD2_ARATH (F4JLP5), RCLA_ECOLI (P77212), TRXR1_BOVIN (O62768), TRXR1_CAEEL (Q17745), TRXR1_DROME (P91938), TRXR1_EMIHU (B9A1H3), TRXR1_HUMAN (Q16881), TRXR1_MOUSE (Q9JMH6), TRXR1_PONAB (Q5NVA2), TRXR1_RAT (O89049), TRXR2_BOVIN (Q9N2I8), TRXR2_CAEEL (P30635), TRXR2_DROME (Q9VNT5), TRXR2_HUMAN (Q9NNW7), TRXR2_MOUSE (Q9JLT4), TRXR2_RAT (Q9Z0J5), TRXR3_HUMAN (Q86VQ6), TRXR3_MOUSE (Q99MD6), TRXR_PLAF5 (Q25861), TRXR_PLAF7 (P61076), TYTR_CRIFA (P39040), TYTR_LEIDO (P39050), TYTR_TRYBB (P39051), TYTR_TRYCO (P13110), TYTR_TRYCR (P28593)» more
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| UniProtKB/Swiss-Prot False negative sequences |
1 sequence
TRXR1_PIG (Q9MYY8) |
| UniProtKB/Swiss-Prot 'Partial' sequences |
3 sequences
DLDH_POPEU (P84545), DLDH_SOLTU (P80503), GSHR_RAT(P70619) |
| PDB [Detailed view] |
105 PDB
pdb_00001aog; pdb_00001bwc; pdb_00001bzl; pdb_00001dnc; pdb_00001dxl; pdb_00001ebd; pdb_00001fea; pdb_00001feb; pdb_00001fec; pdb_00001ger; pdb_00001ges; pdb_00001get; pdb_00001geu; pdb_00001gra; pdb_00001grb; pdb_00001gre; pdb_00001grf; pdb_00001grg; pdb_00001grh; pdb_00001grt; pdb_00001gsn; pdb_00001gxf; pdb_00001h6v; pdb_00001jeh; pdb_00001k4q; pdb_00001lpf; pdb_00001lvl; pdb_00001nda; pdb_00001onf; pdb_00001typ; pdb_00001tyt; pdb_00001v59; pdb_00001xan; pdb_00001zdl; pdb_00001zk7; pdb_00001zkq; pdb_00001zmc; pdb_00001zmd; pdb_00001zx9; pdb_00001zy8; pdb_00002a8x; pdb_00002aaq; pdb_00002cfy; pdb_00002f5z; pdb_00002gh5; pdb_00002grt; pdb_00002hqm; pdb_00002j3n; pdb_00002nvk; pdb_00002qae; pdb_00002r9z; pdb_00002rab; pdb_00002tpr; pdb_00002wba; pdb_00002zz0; pdb_00002zzb; pdb_00002zzc; pdb_00003dgh; pdb_00003dgz; pdb_00003dh9; pdb_00003djg; pdb_00003djj; pdb_00003dk4; pdb_00003dk8; pdb_00003dk9; pdb_00003ean; pdb_00003eao; pdb_00003grs; pdb_00003grt; pdb_00003ii4; pdb_00003lad; pdb_00003qfa; pdb_00003qfb; pdb_00003rnm; pdb_00003sqp; pdb_00004b1b; pdb_00004gr1; pdb_00004grt; pdb_00004j56; pdb_00004j57; pdb_00004jdr; pdb_00004k8d; pdb_00004kpr; pdb_00004m52; pdb_00005grt; pdb_00005j5z; pdb_00005nhg; pdb_00005u8u; pdb_00005x1y; pdb_00006hg8; pdb_00006i4p; pdb_00006i4q; pdb_00006i4r; pdb_00006i4s; pdb_00006i4t; pdb_00006i4u; pdb_00006i4z; pdb_00006kgy; pdb_00006kyy; pdb_00007kmy; pdb_00007psc; pdb_00007x1r; pdb_00007zyt; pdb_00008ct4; pdb_00008u0q » more |