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PROSITE entry PS00077


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General information about the entry

Entry name [info] COX1_CUB
Accession [info] PS00077
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-NOV-1997 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00074

Name and characterization of the entry

Description [info] Heme-copper oxidase catalytic subunit, copper B binding region signature.
Pattern [info]
[YWG]-[LIVFYWTA](2)-[VGS]-H-[LNP]-x-V-x(44,47)-H-H.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 233 in 233 different sequences
Number of true positive hits 233 in 233 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 5
Number of 'partial' sequences 12
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.90 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] copper at position 4
Site [info] copper at position 9
Site [info] copper at position 10
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
233 sequences

AI3_DEBHA   (A9RAH6), AI7_USTMA   (Q0H8Y2), AI8_USTMA   (Q0H8Y3), 
AOX1_AERPE  (Q9YDX6), CCON1_STUST (D9IA43), COX13_THET8 (P98005), 
COX14_BRADU (P98057), COX1A_NOCFA (Q5YRP8), COX1A_PARDE (P08305), 
COX1A_STRAW (Q82AK9), COX1A_STRCO (Q9X813), COX1B_NOCFA (Q5Z0K2), 
COX1B_PARDE (P98002), COX1B_STRAW (Q828X4), COX1B_STRCO (Q9K451), 
COX1_ACACA  (Q37370), COX1_AEDAE  (B0FWC7), COX1_AEGCO  (P68540), 
COX1_ALBCA  (P48887), COX1_ALKPO  (Q04440), COX1_ALLMA  (P80440), 
COX1_AMICA  (P29643), COX1_ANOGA  (P34838), COX1_ANOQU  (P33504), 
COX1_APILI  (P20374), COX1_APTAU  (O03515), COX1_ARATH  (P60620), 
COX1_ARTSF  (Q37705), COX1_ASCSU  (P24881), COX1_ATRSP  (P29644), 
COX1_BACP3  (P16262), COX1_BACSU  (P24010), COX1_BALBO  (Q599A1), 
COX1_BALMU  (P41293), COX1_BALPH  (P24983), COX1_BETVU  (P24794), 
COX1_BLAGE  (Q36724), COX1_BOSIN  (Q6EMS9), COX1_BOSMU  (Q5Y4Q8), 
COX1_BOVIN  (P00396), COX1_BRADU  (P31833), COX1_BUTBU  (Q94WR7), 
COX1_CAEEL  (P24893), COX1_CANAL  (P0C8K9), COX1_CANGA  (Q85QA3), 
COX1_CANLF  (Q9ZZ64), COX1_CANLU  (Q1HKA1), COX1_CANSI  (Q33375), 
COX1_CAPHI  (Q36347), COX1_CARAU  (O78681), COX1_CASBE  (O03521), 
COX1_CERSI  (O03198), COX1_CERSP  (P33517), COX1_CHICK  (P18943), 
COX1_CHLRE  (P08681), COX1_CHOBI  (P50668), COX1_CHOCR  (P48866), 
COX1_CHOFU  (P50669), COX1_CHOOC  (P67793), COX1_CHOPI  (P67794), 
COX1_CHRKN  (Q9B229), COX1_COLPO  (O99041), COX1_CORDI  (Q6NFM3), 
COX1_COREF  (Q8FMT1), COX1_CORGL  (Q79VD7), COX1_COTJA  (P24984), 
COX1_CRANE  (Q6EGJ1), COX1_CRAZI  (Q6EGJ0), COX1_CYACA  (P48867), 
COX1_CYPCA  (P24985), COX1_DANRE  (Q9MIY8), COX1_DASNO  (O21327), 
COX1_DEBHA  (A9RAH5), COX1_DICDI  (O21042), COX1_DIDVI  (P41310), 
COX1_DROMA  (Q34345), COX1_DROME  (P00399), COX1_DRONO  (O03524), 
COX1_DROSE  (Q34391), COX1_DROSI  (Q34388), COX1_DROYA  (P00400), 
COX1_DUGDU  (Q8W9N4), COX1_ELEMA  (Q2I3H2), COX1_EMEND  (P00402), 
COX1_EPHMA  (Q33439), COX1_EQUAS  (P92477), COX1_EREGS  (P62514), 
COX1_FELCA  (P48888), COX1_FORLA  (P34188), COX1_GADMO  (Q36775), 
COX1_GEOBE  (Q6EGH9), COX1_GEOSD  (P29645), COX1_GEOTE  (Q6EGH8), 
COX1_HALGR  (P38595), COX1_HALSA  (P33518), COX1_HIPAM  (Q9ZZY9), 
COX1_HORSE  (P48659), COX1_HUMAN  (P00395), COX1_HYLLA  (Q7GEN7), 
COX1_KLULA  (P20386), COX1_LATCH  (O03167), COX1_LEITA  (P14544), 
COX1_LEMCA  (Q8LX30), COX1_LEPOC  (P29647), COX1_LOCMI  (Q36421), 
COX1_LOXAF  (Q9TA27), COX1_LUMTE  (Q34941), COX1_LYCSM  (O79548), 
COX1_MAIZE  (P08742), COX1_MAMPR  (Q38PS0), COX1_MARPO  (P26856), 
COX1_MEGAT  (P29648), COX1_METSE  (Q35101), COX1_MOUSE  (P00397), 
COX1_MYCBO  (P63853), COX1_MYCLE  (Q9CBQ5), COX1_MYCPA  (Q73VC3), 
COX1_MYCTO  (P9WP70), COX1_MYCTU  (P9WP71), COX1_MYTED  (P41774), 
COX1_MYXGL  (O21079), COX1_NEUCR  (P03945), COX1_NOTPE  (O03539), 
COX1_ONCMY  (P48170), COX1_ORNAN  (Q36452), COX1_ORTCH  (Q6EGI5), 
COX1_ORTGR  (Q6EGI2), COX1_ORTHI  (Q6EGI3), COX1_ORTUN  (Q6EGI4), 
COX1_ORYSJ  (P14578), COX1_OSPRO  (P92661), COX1_OSTNU  (Q9B840), 
COX1_PANBU  (P29649), COX1_PANPA  (Q9T9X0), COX1_PANTR  (Q9T9W1), 
COX1_PAPBU  (Q6EGI0), COX1_PAPHA  (Q9ZXY2), COX1_PARLI  (P12700), 
COX1_PARTE  (P05489), COX1_PATPE  (Q33820), COX1_PECMA  (Q96000), 
COX1_PELSU  (O79672), COX1_PETMA  (Q35536), COX1_PHOVI  (Q00527), 
COX1_PHYME  (Q02211), COX1_PHYPO  (Q07434), COX1_PIG(O79876), 
COX1_PISOC  (P25001), COX1_PLABE  (O99252), COX1_PLACH  (O99255), 
COX1_PLAFA  (Q02766), COX1_PODAN  (P20681), COX1_POLOR  (Q95911), 
COX1_POLSP  (P29650), COX1_POLSX  (P29651), COX1_POMNI  (P29652), 
COX1_PONAB  (P92692), COX1_PROWI  (Q05143), COX1_RABIT  (O79429), 
COX1_RAPSA  (P60621), COX1_RAT(P05503), COX1_RHEAM  (O03546), 
COX1_RHILE  (Q08855), COX1_RHISA  (O99818), COX1_RHIUN  (Q96062), 
COX1_RHOCA  (P98059), COX1_RICBR  (Q1RI42), COX1_RICCN  (Q92I67), 
COX1_RICFE  (Q4ULU5), COX1_RICPR  (O54069), COX1_SACPA  (P98001), 
COX1_SALSA  (Q9ZZM6), COX1_SALTR  (P29653), COX1_SCAPL  (P29654), 
COX1_SCHPO  (P07657), COX1_SCYCA  (O79403), COX1_SHEEP  (O78749), 
COX1_SORBI  (P05502), COX1_SQUAC  (Q9ZZ52), COX1_STRCA  (O21399), 
COX1_STROO  (P98003), COX1_STRPU  (P15544), COX1_SYMSY  (Q34800), 
COX1_SYNY3  (Q06473), COX1_TETNG  (Q4JQI5), COX1_TETPY  (P11947), 
COX1_THEAN  (Q4UJ69), COX1_THET8  (Q5SJ79), COX1_THEVL  (P50676), 
COX1_TINMA  (O03554), COX1_TRIRU  (Q01555), COX1_TRYBB  (P04371), 
COX1_USTMA  (Q0H8Y4), COX1_VANPO  (A6H4Q6), COX1_WHEAT  (P68539), 
COX1_WICCA  (P48868), COX1_XENLA  (P00398), COX1_YEAST  (P00401), 
COX1_ZYGTR  (Q6EGH7), COXN_BRADU  (P98000), CYOB_BUCAI  (P57543), 
CYOB_BUCAP  (Q8K994), CYOB_BUCBP  (Q89AA4), CYOB_ECO57  (P0ABJ0), 
CYOB_ECOL6  (P0ABI9), CYOB_ECOLI  (P0ABI8), CYOB_PSEAE  (Q9I426), 
CYOB_PSEPU  (Q9WWR2), FIXN_AGRT7  (P98055), FIXN_AZOC5  (P98056), 
FIXN_BRADU  (Q03073), FIXN_RHIME  (Q05572), NORB_PSEAE  (Q59647), 
NORB_STUST  (P98008), QOX1_ACEAC  (P98009), QOX1_BACSH  (E0TW66), 
QOX1_BACSU  (P34956), QOX1_STAA3  (Q2FI18), QOX1_STAA8  (Q2FZK0), 
QOX1_STAAB  (Q2YX15), QOX1_STAAC  (Q5HH24), QOX1_STAAM  (Q99V37), 
QOX1_STAAN  (Q7A699), QOX1_STAAR  (Q6GI24), QOX1_STAAS  (Q6GAF3), 
QOX1_STAAW  (Q7A182), QOX1_STAEQ  (Q5HQB0), QOX1_STAES  (Q8CPP7), 
QOX1_STAHJ  (Q4L564), QOX1_STAS1  (Q49WI3), QOX1_SULAC  (P98004), 
QOXM_SULAC  (P39481), SCE4_YEAST  (Q9ZZX1)
» more

UniProtKB/Swiss-Prot
False negative sequences
5 sequences

COX1_OENBE  (P08743), COX1_PEA(P12786), COX1_SOYBN  (P07506), 
COX1_THEPA  (Q36097), COX1_YARLI  (Q9B6E7)
» more

UniProtKB/Swiss-Prot
'Partial' sequences
12 sequences

COX1_ALBTU  (Q09333), COX1_ANAPL  (P50656), COX1_CHORO  (P50671), 
COX1_DORPE  (Q8WEW4), COX1_GOMVA  (P29646), COX1_HAPMA  (Q9ZZ08), 
COX1_LOLFO  (Q9TGE6), COX1_OCTVU  (Q9G6J1), COX1_PLADA  (Q9TGD8), 
COX1_SEPOF  (Q8WEW3), COX1_SEPPH  (Q957T2), COX1_THETH  (Q56408)
» more

PDB
[Detailed view]
178 PDB

1AR1; 1EHK; 1FFT; 1M56; 1M57; 1OCC; 1OCO; 1OCR; 1OCZ; 1QLE; 1V54; 1V55; 1XME; 2DYR; 2DYS; 2EIJ; 2EIK; 2EIL; 2EIM; 2EIN; 2GSM; 2OCC; 2QPD; 2QPE; 2Y69; 2YBB; 2YEV; 2ZXW; 3ABK; 3ABL; 3ABM; 3AG1; 3AG2; 3AG3; 3AG4; 3ASN; 3ASO; 3BVD; 3DTU; 3EH3; 3EH4; 3EH5; 3EHB; 3FYE; 3FYI; 3HB3; 3MK7; 3O0R; 3QJQ; 3QJR; 3QJS; 3QJT; 3QJU; 3QJV; 3S33; 3S38; 3S39; 3S3A; 3S3B; 3S3C; 3S3D; 3S8F; 3S8G; 3WFB; 3WFC; 3WFD; 3WFE; 3WG7; 3X2Q; 4FA7; 4FAA; 4GP4; 4GP5; 4GP8; 4N4Y; 5B1A; 5B1B; 5B3S; 5DJQ; 5GPN; 5GUW; 5GUX; 5IY5; 5J4Z; 5J7Y; 5LUF; 5NDC; 5W97; 5WAU; 5WEH; 5X19; 5X1B; 5X1F; 5XDQ; 5XDX; 5XTH; 5XTI; 5Z62; 5Z84; 5Z85; 5Z86; 5ZCO; 5ZCP; 5ZCQ; 6CI0; 6GIQ; 6HU9; 6J8M; 6JUW; 6JY3; 6JY4; 6KOB; 6KOC; 6KOE; 6NKN; 6NMF; 6NMP; 6T0B; 6T15; 6WTI; 6YMX; 6YMY; 7ATE; 7ATN; 7AU3; 7AU6; 7COH; 7CP5; 7CUB; 7CUQ; 7CUW; 7D5W; 7D5X; 7DGQ; 7DGR; 7DGS; 7DKF; 7EV7; 7N9Z; 7O37; 7O3C; 7O3E; 7Q21; 7QHM; 7QHO; 7THU; 7TIE; 7TIH; 7TII; 7VUW; 7VVR; 7W3E; 7XMA; 7XMB; 7XMC; 7XMD; 7Y44; 7YPY; 7Z10; 8AJZ; 8C8Q; 8D4T; 8DH6; 8E7S; 8EC0; 8F68; 8F6C; 8GBT; 8GCQ; 8GVM; 8H8R; 8H8S; 8HCR; 8HUA; 8IJN; 8K65; 8K6Y; 8Q1B
» more