PROSITE entry PS00077
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General information about the entry
| Entry name [info] | COX1_CUB |
| Accession [info] | PS00077 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-NOV-1997 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00074 |
Name and characterization of the entry
| Description [info] | Heme-copper oxidase catalytic subunit, copper B binding region signature. |
| Pattern [info] |
[YWG]-[LIVFYWTA](2)-[VGS]-H-[LNP]-x-V-x(44,47)-H-H. |
Numerical results [info]
| Total number of hits | 233 in 233 different sequences |
| Number of true positive hits | 233 in 233 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 5 |
| Number of 'partial' sequences | 12 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 97.90 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Site [info] | copper at position 4 |
| Site [info] | copper at position 9 |
| Site [info] | copper at position 10 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
233 sequences
AI3_DEBHA (A9RAH6), AI7_USTMA (Q0H8Y2), AI8_USTMA (Q0H8Y3), AOX1_AERPE (Q9YDX6), CCON1_STUST (D9IA43), COX13_THET8 (P98005), COX14_BRADU (P98057), COX1A_NOCFA (Q5YRP8), COX1A_PARDE (P08305), COX1A_STRAW (Q82AK9), COX1A_STRCO (Q9X813), COX1B_NOCFA (Q5Z0K2), COX1B_PARDE (P98002), COX1B_STRAW (Q828X4), COX1B_STRCO (Q9K451), COX1_ACACA (Q37370), COX1_AEDAE (B0FWC7), COX1_AEGCO (P68540), COX1_ALBCA (P48887), COX1_ALKPO (Q04440), COX1_ALLMA (P80440), COX1_AMICA (P29643), COX1_ANOGA (P34838), COX1_ANOQU (P33504), COX1_APILI (P20374), COX1_APTAU (O03515), COX1_ARATH (P60620), COX1_ARTSF (Q37705), COX1_ASCSU (P24881), COX1_ATRSP (P29644), COX1_BACP3 (P16262), COX1_BACSU (P24010), COX1_BALBO (Q599A1), COX1_BALMU (P41293), COX1_BALPH (P24983), COX1_BETVU (P24794), COX1_BLAGE (Q36724), COX1_BOSIN (Q6EMS9), COX1_BOSMU (Q5Y4Q8), COX1_BOVIN (P00396), COX1_BRADU (P31833), COX1_BUTBU (Q94WR7), COX1_CAEEL (P24893), COX1_CANAL (P0C8K9), COX1_CANGA (Q85QA3), COX1_CANLF (Q9ZZ64), COX1_CANLU (Q1HKA1), COX1_CANSI (Q33375), COX1_CAPHI (Q36347), COX1_CARAU (O78681), COX1_CASBE (O03521), COX1_CERSI (O03198), COX1_CERSP (P33517), COX1_CHICK (P18943), COX1_CHLRE (P08681), COX1_CHOBI (P50668), COX1_CHOCR (P48866), COX1_CHOFU (P50669), COX1_CHOOC (P67793), COX1_CHOPI (P67794), COX1_CHRKN (Q9B229), COX1_COLPO (O99041), COX1_CORDI (Q6NFM3), COX1_COREF (Q8FMT1), COX1_CORGL (Q79VD7), COX1_COTJA (P24984), COX1_CRANE (Q6EGJ1), COX1_CRAZI (Q6EGJ0), COX1_CYACA (P48867), COX1_CYPCA (P24985), COX1_DANRE (Q9MIY8), COX1_DASNO (O21327), COX1_DEBHA (A9RAH5), COX1_DICDI (O21042), COX1_DIDVI (P41310), COX1_DROMA (Q34345), COX1_DROME (P00399), COX1_DRONO (O03524), COX1_DROSE (Q34391), COX1_DROSI (Q34388), COX1_DROYA (P00400), COX1_DUGDU (Q8W9N4), COX1_ELEMA (Q2I3H2), COX1_EMEND (P00402), COX1_EPHMA (Q33439), COX1_EQUAS (P92477), COX1_EREGS (P62514), COX1_FELCA (P48888), COX1_FORLA (P34188), COX1_GADMO (Q36775), COX1_GEOBE (Q6EGH9), COX1_GEOSD (P29645), COX1_GEOTE (Q6EGH8), COX1_HALGR (P38595), COX1_HALSA (P33518), COX1_HIPAM (Q9ZZY9), COX1_HORSE (P48659), COX1_HUMAN (P00395), COX1_HYLLA (Q7GEN7), COX1_KLULA (P20386), COX1_LATCH (O03167), COX1_LEITA (P14544), COX1_LEMCA (Q8LX30), COX1_LEPOC (P29647), COX1_LOCMI (Q36421), COX1_LOXAF (Q9TA27), COX1_LUMTE (Q34941), COX1_LYCSM (O79548), COX1_MAIZE (P08742), COX1_MAMPR (Q38PS0), COX1_MARPO (P26856), COX1_MEGAT (P29648), COX1_METSE (Q35101), COX1_MOUSE (P00397), COX1_MYCBO (P63853), COX1_MYCLE (Q9CBQ5), COX1_MYCPA (Q73VC3), COX1_MYCTO (P9WP70), COX1_MYCTU (P9WP71), COX1_MYTED (P41774), COX1_MYXGL (O21079), COX1_NEUCR (P03945), COX1_NOTPE (O03539), COX1_ONCMY (P48170), COX1_ORNAN (Q36452), COX1_ORTCH (Q6EGI5), COX1_ORTGR (Q6EGI2), COX1_ORTHI (Q6EGI3), COX1_ORTUN (Q6EGI4), COX1_ORYSJ (P14578), COX1_OSPRO (P92661), COX1_OSTNU (Q9B840), COX1_PANBU (P29649), COX1_PANPA (Q9T9X0), COX1_PANTR (Q9T9W1), COX1_PAPBU (Q6EGI0), COX1_PAPHA (Q9ZXY2), COX1_PARLI (P12700), COX1_PARTE (P05489), COX1_PATPE (Q33820), COX1_PECMA (Q96000), COX1_PELSU (O79672), COX1_PETMA (Q35536), COX1_PHOVI (Q00527), COX1_PHYME (Q02211), COX1_PHYPO (Q07434), COX1_PIG(O79876), COX1_PISOC (P25001), COX1_PLABE (O99252), COX1_PLACH (O99255), COX1_PLAFA (Q02766), COX1_PODAN (P20681), COX1_POLOR (Q95911), COX1_POLSP (P29650), COX1_POLSX (P29651), COX1_POMNI (P29652), COX1_PONAB (P92692), COX1_PROWI (Q05143), COX1_RABIT (O79429), COX1_RAPSA (P60621), COX1_RAT(P05503), COX1_RHEAM (O03546), COX1_RHILE (Q08855), COX1_RHISA (O99818), COX1_RHIUN (Q96062), COX1_RHOCA (P98059), COX1_RICBR (Q1RI42), COX1_RICCN (Q92I67), COX1_RICFE (Q4ULU5), COX1_RICPR (O54069), COX1_SACPA (P98001), COX1_SALSA (Q9ZZM6), COX1_SALTR (P29653), COX1_SCAPL (P29654), COX1_SCHPO (P07657), COX1_SCYCA (O79403), COX1_SHEEP (O78749), COX1_SORBI (P05502), COX1_SQUAC (Q9ZZ52), COX1_STRCA (O21399), COX1_STROO (P98003), COX1_STRPU (P15544), COX1_SYMSY (Q34800), COX1_SYNY3 (Q06473), COX1_TETNG (Q4JQI5), COX1_TETPY (P11947), COX1_THEAN (Q4UJ69), COX1_THET8 (Q5SJ79), COX1_THEVL (P50676), COX1_TINMA (O03554), COX1_TRIRU (Q01555), COX1_TRYBB (P04371), COX1_USTMA (Q0H8Y4), COX1_VANPO (A6H4Q6), COX1_WHEAT (P68539), COX1_WICCA (P48868), COX1_XENLA (P00398), COX1_YEAST (P00401), COX1_ZYGTR (Q6EGH7), COXN_BRADU (P98000), CYOB_BUCAI (P57543), CYOB_BUCAP (Q8K994), CYOB_BUCBP (Q89AA4), CYOB_ECO57 (P0ABJ0), CYOB_ECOL6 (P0ABI9), CYOB_ECOLI (P0ABI8), CYOB_PSEAE (Q9I426), CYOB_PSEPU (Q9WWR2), FIXN_AGRT7 (P98055), FIXN_AZOC5 (P98056), FIXN_BRADU (Q03073), FIXN_RHIME (Q05572), NORB_PSEAE (Q59647), NORB_STUST (P98008), QOX1_ACEAC (P98009), QOX1_BACSH (E0TW66), QOX1_BACSU (P34956), QOX1_STAA3 (Q2FI18), QOX1_STAA8 (Q2FZK0), QOX1_STAAB (Q2YX15), QOX1_STAAC (Q5HH24), QOX1_STAAM (Q99V37), QOX1_STAAN (Q7A699), QOX1_STAAR (Q6GI24), QOX1_STAAS (Q6GAF3), QOX1_STAAW (Q7A182), QOX1_STAEQ (Q5HQB0), QOX1_STAES (Q8CPP7), QOX1_STAHJ (Q4L564), QOX1_STAS1 (Q49WI3), QOX1_SULAC (P98004), QOXM_SULAC (P39481), SCE4_YEAST (Q9ZZX1)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
5 sequences
COX1_OENBE (P08743), COX1_PEA(P12786), COX1_SOYBN (P07506), COX1_THEPA (Q36097), COX1_YARLI (Q9B6E7)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
12 sequences
COX1_ALBTU (Q09333), COX1_ANAPL (P50656), COX1_CHORO (P50671), COX1_DORPE (Q8WEW4), COX1_GOMVA (P29646), COX1_HAPMA (Q9ZZ08), COX1_LOLFO (Q9TGE6), COX1_OCTVU (Q9G6J1), COX1_PLADA (Q9TGD8), COX1_SEPOF (Q8WEW3), COX1_SEPPH (Q957T2), COX1_THETH (Q56408)» more |
| PDB [Detailed view] |
172 PDB
1AR1; 1EHK; 1FFT; 1M56; 1M57; 1OCC; 1OCO; 1OCR; 1OCZ; 1QLE; 1V54; 1V55; 1XME; 2DYR; 2DYS; 2EIJ; 2EIK; 2EIL; 2EIM; 2EIN; 2GSM; 2OCC; 2QPD; 2QPE; 2Y69; 2YBB; 2YEV; 2ZXW; 3ABK; 3ABL; 3ABM; 3AG1; 3AG2; 3AG3; 3AG4; 3ASN; 3ASO; 3BVD; 3DTU; 3EH3; 3EH4; 3EH5; 3EHB; 3FYE; 3FYI; 3HB3; 3MK7; 3O0R; 3QJQ; 3QJR; 3QJS; 3QJT; 3QJU; 3QJV; 3S33; 3S38; 3S39; 3S3A; 3S3B; 3S3C; 3S3D; 3S8F; 3S8G; 3WFB; 3WFC; 3WFD; 3WFE; 3WG7; 3X2Q; 4FA7; 4FAA; 4GP4; 4GP5; 4GP8; 4N4Y; 5B1A; 5B1B; 5B3S; 5DJQ; 5GPN; 5GUW; 5GUX; 5IY5; 5J4Z; 5J7Y; 5LUF; 5NDC; 5W97; 5WAU; 5WEH; 5X19; 5X1B; 5X1F; 5XDQ; 5XDX; 5XTH; 5XTI; 5Z62; 5Z84; 5Z85; 5Z86; 5ZCO; 5ZCP; 5ZCQ; 6CI0; 6GIQ; 6HU9; 6J8M; 6JUW; 6JY3; 6JY4; 6KOB; 6KOC; 6KOE; 6NKN; 6NMF; 6NMP; 6T0B; 6T15; 6WTI; 6YMX; 6YMY; 7ATE; 7ATN; 7AU3; 7AU6; 7COH; 7CP5; 7CUB; 7CUQ; 7CUW; 7D5W; 7D5X; 7DGQ; 7DGR; 7DGS; 7DKF; 7EV7; 7N9Z; 7O37; 7O3C; 7O3E; 7Q21; 7QHM; 7QHO; 7THU; 7TIE; 7TIH; 7TII; 7VUW; 7VVR; 7W3E; 7XMA; 7XMB; 7XMC; 7XMD; 7Y44; 7YPY; 7Z10; 8C8Q; 8D4T; 8DH6; 8E7S; 8EC0; 8F68; 8F6C; 8GVM; 8H8R; 8H8S; 8HCR; 8HUA; 8IJN » more |