PROSITE entry PS00077
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General information about the entry
| Entry name [info] | COX1_CUB |
| Accession [info] | PS00077 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-NOV-1997 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00074 |
Name and characterization of the entry
| Description [info] | Heme-copper oxidase catalytic subunit, copper B binding region signature. |
| Pattern [info] |
[YWG]-[LIVFYWTA](2)-[VGS]-H-[LNP]-x-V-x(44,47)-H-H. |
Numerical results [info]
| Total number of hits | 233 in 233 different sequences |
| Number of true positive hits | 233 in 233 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 5 |
| Number of 'partial' sequences | 12 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 97.90 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Site [info] | copper at position 4 |
| Site [info] | copper at position 9 |
| Site [info] | copper at position 10 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
233 sequences
AI3_DEBHA (A9RAH6 ), AI7_USTMA (Q0H8Y2 ), AI8_USTMA (Q0H8Y3 ), AOX1_AERPE (Q9YDX6 ), CCON1_STUST (D9IA43 ), COX13_THET8 (P98005 ), COX14_BRADU (P98057 ), COX1A_NOCFA (Q5YRP8 ), COX1A_PARDE (P08305 ), COX1A_STRAW (Q82AK9 ), COX1A_STRCO (Q9X813 ), COX1B_NOCFA (Q5Z0K2 ), COX1B_PARDE (P98002 ), COX1B_STRAW (Q828X4 ), COX1B_STRCO (Q9K451 ), COX1_ACACA (Q37370 ), COX1_AEDAE (B0FWC7 ), COX1_AEGCO (P68540 ), COX1_ALBCA (P48887 ), COX1_ALKPO (Q04440 ), COX1_ALLMA (P80440 ), COX1_AMICA (P29643 ), COX1_ANOGA (P34838 ), COX1_ANOQU (P33504 ), COX1_APILI (P20374 ), COX1_APTAU (O03515 ), COX1_ARATH (P60620 ), COX1_ARTSF (Q37705 ), COX1_ASCSU (P24881 ), COX1_ASHGO (P62514 ), COX1_ATRSP (P29644 ), COX1_BACP3 (P16262 ), COX1_BACSU (P24010 ), COX1_BALBO (Q599A1 ), COX1_BALMU (P41293 ), COX1_BALPH (P24983 ), COX1_BETVU (P24794 ), COX1_BLAGE (Q36724 ), COX1_BOSIN (Q6EMS9 ), COX1_BOSMU (Q5Y4Q8 ), COX1_BOVIN (P00396 ), COX1_BRADU (P31833 ), COX1_BUTBU (Q94WR7 ), COX1_CAEEL (P24893 ), COX1_CANAL (P0C8K9 ), COX1_CANGA (Q85QA3 ), COX1_CANLF (Q9ZZ64 ), COX1_CANLU (Q1HKA1 ), COX1_CANSI (Q33375 ), COX1_CAPHI (Q36347 ), COX1_CARAU (O78681 ), COX1_CASBE (O03521 ), COX1_CERSI (O03198 ), COX1_CERSP (P33517 ), COX1_CHICK (P18943 ), COX1_CHLRE (P08681 ), COX1_CHOBI (P50668 ), COX1_CHOCR (P48866 ), COX1_CHOFU (P50669 ), COX1_CHOOC (P67793 ), COX1_CHOPI (P67794 ), COX1_CHRKN (Q9B229 ), COX1_COLPO (O99041 ), COX1_CORDI (Q6NFM3 ), COX1_COREF (Q8FMT1 ), COX1_CORGL (Q79VD7 ), COX1_COTJA (P24984 ), COX1_CRANE (Q6EGJ1 ), COX1_CRAZI (Q6EGJ0 ), COX1_CYACA (P48867 ), COX1_CYPCA (P24985 ), COX1_DANRE (Q9MIY8 ), COX1_DASNO (O21327 ), COX1_DEBHA (A9RAH5 ), COX1_DICDI (O21042 ), COX1_DIDVI (P41310 ), COX1_DROMA (Q34345 ), COX1_DROME (P00399 ), COX1_DRONO (O03524 ), COX1_DROSE (Q34391 ), COX1_DROSI (Q34388 ), COX1_DROYA (P00400 ), COX1_DUGDU (Q8W9N4 ), COX1_ELEMA (Q2I3H2 ), COX1_EMEND (P00402 ), COX1_EPHMA (Q33439 ), COX1_EQUAS (P92477 ), COX1_FELCA (P48888 ), COX1_FORLA (P34188 ), COX1_GADMO (Q36775 ), COX1_GEOBE (Q6EGH9 ), COX1_GEOSD (P29645 ), COX1_GEOTE (Q6EGH8 ), COX1_HALGR (P38595 ), COX1_HALSA (P33518 ), COX1_HIPAM (Q9ZZY9 ), COX1_HORSE (P48659 ), COX1_HUMAN (P00395 ), COX1_HYLLA (Q7GEN7 ), COX1_KLULA (P20386 ), COX1_LATCH (O03167 ), COX1_LEITA (P14544 ), COX1_LEMCA (Q8LX30 ), COX1_LEPOC (P29647 ), COX1_LOCMI (Q36421 ), COX1_LOXAF (Q9TA27 ), COX1_LUMTE (Q34941 ), COX1_LYCSM (O79548 ), COX1_MAIZE (P08742 ), COX1_MAMPR (Q38PS0 ), COX1_MARPO (P26856 ), COX1_MEGAT (P29648 ), COX1_METSE (Q35101 ), COX1_MOUSE (P00397 ), COX1_MYCBO (P63853 ), COX1_MYCLE (Q9CBQ5 ), COX1_MYCPA (Q73VC3 ), COX1_MYCTO (P9WP70 ), COX1_MYCTU (P9WP71 ), COX1_MYTED (P41774 ), COX1_MYXGL (O21079 ), COX1_NEUCR (P03945 ), COX1_NOTPE (O03539 ), COX1_ONCMY (P48170 ), COX1_ORNAN (Q36452 ), COX1_ORTCH (Q6EGI5 ), COX1_ORTGR (Q6EGI2 ), COX1_ORTHI (Q6EGI3 ), COX1_ORTUN (Q6EGI4 ), COX1_ORYSJ (P14578 ), COX1_OSPRO (P92661 ), COX1_OSTNU (Q9B840 ), COX1_PANBU (P29649 ), COX1_PANPA (Q9T9X0 ), COX1_PANTR (Q9T9W1 ), COX1_PAPBU (Q6EGI0 ), COX1_PAPHA (Q9ZXY2 ), COX1_PARLI (P12700 ), COX1_PARTE (P05489 ), COX1_PATPE (Q33820 ), COX1_PECMA (Q96000 ), COX1_PELSU (O79672 ), COX1_PETMA (Q35536 ), COX1_PHOVI (Q00527 ), COX1_PHYME (Q02211 ), COX1_PHYPO (Q07434 ), COX1_PIG (O79876 ), COX1_PISOC (P25001 ), COX1_PLABE (O99252 ), COX1_PLACH (O99255 ), COX1_PLAFA (Q02766 ), COX1_PODAN (P20681 ), COX1_POLOR (Q95911 ), COX1_POLSP (P29650 ), COX1_POLSX (P29651 ), COX1_POMNI (P29652 ), COX1_PONAB (P92692 ), COX1_PROWI (Q05143 ), COX1_RABIT (O79429 ), COX1_RAPSA (P60621 ), COX1_RAT (P05503 ), COX1_RHEAM (O03546 ), COX1_RHILE (Q08855 ), COX1_RHISA (O99818 ), COX1_RHIUN (Q96062 ), COX1_RHOCA (P98059 ), COX1_RICBR (Q1RI42 ), COX1_RICCN (Q92I67 ), COX1_RICFE (Q4ULU5 ), COX1_RICPR (O54069 ), COX1_SACPA (P98001 ), COX1_SALSA (Q9ZZM6 ), COX1_SALTR (P29653 ), COX1_SCAPL (P29654 ), COX1_SCHPO (P07657 ), COX1_SCYCA (O79403 ), COX1_SHEEP (O78749 ), COX1_SORBI (P05502 ), COX1_SQUAC (Q9ZZ52 ), COX1_STRCA (O21399 ), COX1_STROO (P98003 ), COX1_STRPU (P15544 ), COX1_SYMSY (Q34800 ), COX1_SYNY3 (Q06473 ), COX1_TETNG (Q4JQI5 ), COX1_TETPY (P11947 ), COX1_THEAN (Q4UJ69 ), COX1_THET8 (Q5SJ79 ), COX1_THEVL (P50676 ), COX1_TINMA (O03554 ), COX1_TRIRU (Q01555 ), COX1_TRYBB (P04371 ), COX1_USTMA (Q0H8Y4 ), COX1_VANPO (A6H4Q6 ), COX1_WHEAT (P68539 ), COX1_WICCA (P48868 ), COX1_XENLA (P00398 ), COX1_YEAST (P00401 ), COX1_ZYGTR (Q6EGH7 ), COXN_BRADU (P98000 ), CYOB_BUCAI (P57543 ), CYOB_BUCAP (Q8K994 ), CYOB_BUCBP (Q89AA4 ), CYOB_ECO57 (P0ABJ0 ), CYOB_ECOL6 (P0ABI9 ), CYOB_ECOLI (P0ABI8 ), CYOB_PSEAE (Q9I426 ), CYOB_PSEPU (Q9WWR2 ), FIXN_AGRT7 (P98055 ), FIXN_AZOC5 (P98056 ), FIXN_BRADU (Q03073 ), FIXN_RHIME (Q05572 ), NORB_PSEAE (Q59647 ), NORB_STUST (P98008 ), QOX1_ACEAC (P98009 ), QOX1_BACSH (E0TW66 ), QOX1_BACSU (P34956 ), QOX1_STAA3 (Q2FI18 ), QOX1_STAA8 (Q2FZK0 ), QOX1_STAAB (Q2YX15 ), QOX1_STAAC (Q5HH24 ), QOX1_STAAM (Q99V37 ), QOX1_STAAN (Q7A699 ), QOX1_STAAR (Q6GI24 ), QOX1_STAAS (Q6GAF3 ), QOX1_STAAW (Q7A182 ), QOX1_STAEQ (Q5HQB0 ), QOX1_STAES (Q8CPP7 ), QOX1_STAHJ (Q4L564 ), QOX1_STAS1 (Q49WI3 ), QOX1_SULAC (P98004 ), QOXM_SULAC (P39481 ), SCE4_YEAST (Q9ZZX1 )» more
|
| UniProtKB/Swiss-Prot False negative sequences |
5 sequences
COX1_OENBE (P08743 ), COX1_PEA (P12786 ), COX1_SOYBN (P07506 ), COX1_THEPA (Q36097 ), COX1_YARLI (Q9B6E7 )» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
12 sequences
COX1_ALBTU (Q09333 ), COX1_ANAPL (P50656 ), COX1_CHORO (P50671 ), COX1_DORPE (Q8WEW4 ), COX1_GOMVA (P29646 ), COX1_HAPMA (Q9ZZ08 ), COX1_LOLFO (Q9TGE6 ), COX1_OCTVU (Q9G6J1 ), COX1_PLADA (Q9TGD8 ), COX1_SEPOF (Q8WEW3 ), COX1_SEPPH (Q957T2 ), COX1_THETH (Q56408 )» more |
| PDB [Detailed view] |
157 PDB
1AR1; 1EHK; 1FFT; 1M56; 1M57; 1OCC; 1OCO; 1OCR; 1OCZ; 1QLE; 1V54; 1V55; 1XME; 2DYR; 2DYS; 2EIJ; 2EIK; 2EIL; 2EIM; 2EIN; 2GSM; 2OCC; 2QPD; 2QPE; 2Y69; 2YBB; 2YEV; 2ZXW; 3ABK; 3ABL; 3ABM; 3AG1; 3AG2; 3AG3; 3AG4; 3ASN; 3ASO; 3BVD; 3DTU; 3EH3; 3EH4; 3EH5; 3EHB; 3FYE; 3FYI; 3HB3; 3MK7; 3O0R; 3QJQ; 3QJR; 3QJS; 3QJT; 3QJU; 3QJV; 3S33; 3S38; 3S39; 3S3A; 3S3B; 3S3C; 3S3D; 3S8F; 3S8G; 3WFB; 3WFC; 3WFD; 3WFE; 3WG7; 3X2Q; 4FA7; 4FAA; 4GP4; 4GP5; 4GP8; 4N4Y; 5B1A; 5B1B; 5B3S; 5DJQ; 5GPN; 5GUW; 5GUX; 5IY5; 5J4Z; 5J7Y; 5LUF; 5NDC; 5W97; 5WAU; 5WEH; 5X19; 5X1B; 5X1F; 5XDQ; 5XDX; 5XTH; 5XTI; 5Z62; 5Z84; 5Z85; 5Z86; 5ZCO; 5ZCP; 5ZCQ; 6CI0; 6GIQ; 6HU9; 6J8M; 6JUW; 6JY3; 6JY4; 6KOB; 6KOC; 6KOE; 6NKN; 6NMF; 6NMP; 6T0B; 6T15; 6WTI; 6YMX; 6YMY; 7ATE; 7ATN; 7AU3; 7AU6; 7COH; 7CP5; 7CUB; 7CUQ; 7CUW; 7D5W; 7D5X; 7DGQ; 7DGR; 7DGS; 7DKF; 7EV7; 7N9Z; 7O37; 7O3C; 7O3E; 7Q21; 7QHM; 7QHO; 7THU; 7TIE; 7TIH; 7TII; 7VUW; 7VVR; 7Y44; 7YPY; 7Z10; 8D4T; 8DH6; 8GVM » more |