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Entry: PS00077

General information about the entry

Entry name [info] COX1_CUB
Accession [info] PS00077
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-NOV-1997 DATA UPDATE;
13-NOV-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC00074

Name and characterization of the entry

Description [info] Heme-copper oxidase catalytic subunit, copper B binding region signature.
Pattern [info]
[YWG]-[LIVFYWTA](2)-[VGS]-H-[LNP]-x-V-x(44,47)-H-H.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_10 which contains 561'356 sequence entries.


Total number of hits 233 in 233 different sequences
Number of true positive hits 233 in 233 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 5
Number of 'partial' sequences 12
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.90 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] copper at position 4
Site [info] copper at position 9
Site [info] copper at position 10
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
233 sequences

AI3_DEBHA   (A9RAH6    ), AI7_USTMA   (Q0H8Y2    ), AI8_USTMA   (Q0H8Y3    ), 
AOX1_AERPE  (Q9YDX6    ), CCON1_PSEST (D9IA43    ), COX13_THET8 (P98005    ), 
COX14_BRADU (P98057    ), COX1A_NOCFA (Q5YRP8    ), COX1A_PARDE (P08305    ), 
COX1A_STRAW (Q82AK9    ), COX1A_STRCO (Q9X813    ), COX1B_NOCFA (Q5Z0K2    ), 
COX1B_PARDE (P98002    ), COX1B_STRAW (Q828X4    ), COX1B_STRCO (Q9K451    ), 
COX1_ACACA  (Q37370    ), COX1_AEDAE  (B0FWC7    ), COX1_AEGCO  (P68540    ), 
COX1_ALBCA  (P48887    ), COX1_ALLMA  (P80440    ), COX1_AMICA  (P29643    ), 
COX1_ANOGA  (P34838    ), COX1_ANOQU  (P33504    ), COX1_APILI  (P20374    ), 
COX1_APTAU  (O03515    ), COX1_ARATH  (P60620    ), COX1_ARTSF  (Q37705    ), 
COX1_ASCSU  (P24881    ), COX1_ASHGO  (P62514    ), COX1_ATRSP  (P29644    ), 
COX1_BACP3  (P16262    ), COX1_BACPE  (Q04440    ), COX1_BACSU  (P24010    ), 
COX1_BALBO  (Q599A1    ), COX1_BALMU  (P41293    ), COX1_BALPH  (P24983    ), 
COX1_BETVU  (P24794    ), COX1_BLAGE  (Q36724    ), COX1_BOSIN  (Q6EMS9    ), 
COX1_BOSMU  (Q5Y4Q8    ), COX1_BOVIN  (P00396    ), COX1_BRADU  (P31833    ), 
COX1_BUTBU  (Q94WR7    ), COX1_CAEEL  (P24893    ), COX1_CANAL  (P0C8K9    ), 
COX1_CANGA  (Q85QA3    ), COX1_CANLF  (Q9ZZ64    ), COX1_CANLU  (Q1HKA1    ), 
COX1_CANSI  (Q33375    ), COX1_CAPHI  (Q36347    ), COX1_CARAU  (O78681    ), 
COX1_CASBE  (O03521    ), COX1_CERSI  (O03198    ), COX1_CHICK  (P18943    ), 
COX1_CHLRE  (P08681    ), COX1_CHOBI  (P50668    ), COX1_CHOCR  (P48866    ), 
COX1_CHOFU  (P50669    ), COX1_CHOOC  (P67793    ), COX1_CHOPI  (P67794    ), 
COX1_CHRKN  (Q9B229    ), COX1_COLPO  (O99041    ), COX1_CORDI  (Q6NFM3    ), 
COX1_COREF  (Q8FMT1    ), COX1_CORGL  (Q79VD7    ), COX1_COTJA  (P24984    ), 
COX1_CRANE  (Q6EGJ1    ), COX1_CRAZI  (Q6EGJ0    ), COX1_CYACA  (P48867    ), 
COX1_CYPCA  (P24985    ), COX1_DANRE  (Q9MIY8    ), COX1_DASNO  (O21327    ), 
COX1_DEBHA  (A9RAH5    ), COX1_DICDI  (O21042    ), COX1_DIDVI  (P41310    ), 
COX1_DROMA  (Q34345    ), COX1_DROME  (P00399    ), COX1_DRONO  (O03524    ), 
COX1_DROSE  (Q34391    ), COX1_DROSI  (Q34388    ), COX1_DROYA  (P00400    ), 
COX1_DUGDU  (Q8W9N4    ), COX1_ELEMA  (Q2I3H2    ), COX1_EMEND  (P00402    ), 
COX1_EPHEQ  (Q33439    ), COX1_EQUAS  (P92477    ), COX1_FELCA  (P48888    ), 
COX1_FORLA  (P34188    ), COX1_GADMO  (Q36775    ), COX1_GEOBE  (Q6EGH9    ), 
COX1_GEOSD  (P29645    ), COX1_GEOTE  (Q6EGH8    ), COX1_HALGR  (P38595    ), 
COX1_HALSA  (P33518    ), COX1_HIPAM  (Q9ZZY9    ), COX1_HORSE  (P48659    ), 
COX1_HUMAN  (P00395    ), COX1_HYLLA  (Q7GEN7    ), COX1_KLULA  (P20386    ), 
COX1_LATCH  (O03167    ), COX1_LEITA  (P14544    ), COX1_LEMCA  (Q8LX30    ), 
COX1_LEPOC  (P29647    ), COX1_LOCMI  (Q36421    ), COX1_LOXAF  (Q9TA27    ), 
COX1_LUMTE  (Q34941    ), COX1_LYCSM  (O79548    ), COX1_MACRO  (P92661    ), 
COX1_MAIZE  (P08742    ), COX1_MAMPR  (Q38PS0    ), COX1_MARPO  (P26856    ), 
COX1_MEGAT  (P29648    ), COX1_METSE  (Q35101    ), COX1_MOUSE  (P00397    ), 
COX1_MYCBO  (P63853    ), COX1_MYCLE  (Q9CBQ5    ), COX1_MYCPA  (Q73VC3    ), 
COX1_MYCTO  (P9WP70    ), COX1_MYCTU  (P9WP71    ), COX1_MYTED  (P41774    ), 
COX1_MYXGL  (O21079    ), COX1_NEUCR  (P03945    ), COX1_NOTPE  (O03539    ), 
COX1_ONCMY  (P48170    ), COX1_ORNAN  (Q36452    ), COX1_ORTCH  (Q6EGI5    ), 
COX1_ORTGR  (Q6EGI2    ), COX1_ORTHI  (Q6EGI3    ), COX1_ORTUN  (Q6EGI4    ), 
COX1_ORYSJ  (P14578    ), COX1_OSTNU  (Q9B840    ), COX1_PANBU  (P29649    ), 
COX1_PANPA  (Q9T9X0    ), COX1_PANTR  (Q9T9W1    ), COX1_PAPBU  (Q6EGI0    ), 
COX1_PAPHA  (Q9ZXY2    ), COX1_PARLI  (P12700    ), COX1_PARTE  (P05489    ), 
COX1_PATPE  (Q33820    ), COX1_PECMA  (Q96000    ), COX1_PELSU  (O79672    ), 
COX1_PETMA  (Q35536    ), COX1_PHOVI  (Q00527    ), COX1_PHYME  (Q02211    ), 
COX1_PHYPO  (Q07434    ), COX1_PIG    (O79876    ), COX1_PISOC  (P25001    ), 
COX1_PLABE  (O99252    ), COX1_PLACH  (O99255    ), COX1_PLAFA  (Q02766    ), 
COX1_PODAN  (P20681    ), COX1_POLOR  (Q95911    ), COX1_POLSP  (P29650    ), 
COX1_POLSX  (P29651    ), COX1_POMNI  (P29652    ), COX1_PONAB  (P92692    ), 
COX1_PROWI  (Q05143    ), COX1_RABIT  (O79429    ), COX1_RAPSA  (P60621    ), 
COX1_RAT    (P05503    ), COX1_RHEAM  (O03546    ), COX1_RHILE  (Q08855    ), 
COX1_RHISA  (O99818    ), COX1_RHIUN  (Q96062    ), COX1_RHOCA  (P98059    ), 
COX1_RHOSH  (P33517    ), COX1_RICBR  (Q1RI42    ), COX1_RICCN  (Q92I67    ), 
COX1_RICFE  (Q4ULU5    ), COX1_RICPR  (O54069    ), COX1_SACPA  (P98001    ), 
COX1_SALSA  (Q9ZZM6    ), COX1_SALTR  (P29653    ), COX1_SCAPL  (P29654    ), 
COX1_SCHPO  (P07657    ), COX1_SCYCA  (O79403    ), COX1_SHEEP  (O78749    ), 
COX1_SORBI  (P05502    ), COX1_SQUAC  (Q9ZZ52    ), COX1_STRCA  (O21399    ), 
COX1_STROO  (P98003    ), COX1_STRPU  (P15544    ), COX1_SYMSY  (Q34800    ), 
COX1_SYNY3  (Q06473    ), COX1_TETNG  (Q4JQI5    ), COX1_TETPY  (P11947    ), 
COX1_THEAN  (Q4UJ69    ), COX1_THET8  (Q5SJ79    ), COX1_THEVL  (P50676    ), 
COX1_TINMA  (O03554    ), COX1_TRIRU  (Q01555    ), COX1_TRYBB  (P04371    ), 
COX1_USTMA  (Q0H8Y4    ), COX1_VANPO  (A6H4Q6    ), COX1_WHEAT  (P68539    ), 
COX1_WICCA  (P48868    ), COX1_XENLA  (P00398    ), COX1_YEAST  (P00401    ), 
COX1_ZYGTR  (Q6EGH7    ), COXN_BRADU  (P98000    ), CYOB_BUCAI  (P57543    ), 
CYOB_BUCAP  (Q8K994    ), CYOB_BUCBP  (Q89AA4    ), CYOB_ECO57  (P0ABJ0    ), 
CYOB_ECOL6  (P0ABI9    ), CYOB_ECOLI  (P0ABI8    ), CYOB_PSEAE  (Q9I426    ), 
CYOB_PSEPU  (Q9WWR2    ), FIXN_AGRT7  (P98055    ), FIXN_AZOC5  (P98056    ), 
FIXN_BRADU  (Q03073    ), FIXN_RHIME  (Q05572    ), NORB_PSEAE  (Q59647    ), 
NORB_PSEST  (P98008    ), QOX1_ACEAC  (P98009    ), QOX1_BACPZ  (E0TW66    ), 
QOX1_BACSU  (P34956    ), QOX1_STAA3  (Q2FI18    ), QOX1_STAA8  (Q2FZK0    ), 
QOX1_STAAB  (Q2YX15    ), QOX1_STAAC  (Q5HH24    ), QOX1_STAAM  (Q99V37    ), 
QOX1_STAAN  (Q7A699    ), QOX1_STAAR  (Q6GI24    ), QOX1_STAAS  (Q6GAF3    ), 
QOX1_STAAW  (Q7A182    ), QOX1_STAEQ  (Q5HQB0    ), QOX1_STAES  (Q8CPP7    ), 
QOX1_STAHJ  (Q4L564    ), QOX1_STAS1  (Q49WI3    ), QOX1_SULAC  (P98004    ), 
QOXM_SULAC  (P39481    ), SCE4_YEAST  (Q9ZZX1    )
» more

UniProtKB/Swiss-Prot
False negative sequences
5 sequences

COX1_OENBE  (P08743    ), COX1_PEA    (P12786    ), COX1_SOYBN  (P07506    ), 
COX1_THEPA  (Q36097    ), COX1_YARLI  (Q9B6E7    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
12 sequences

COX1_ALBTU  (Q09333    ), COX1_ANAPL  (P50656    ), COX1_CHORO  (P50671    ), 
COX1_DORPE  (Q8WEW4    ), COX1_GOMVA  (P29646    ), COX1_HAPMA  (Q9ZZ08    ), 
COX1_LOLFO  (Q9TGE6    ), COX1_OCTVU  (Q9G6J1    ), COX1_PLADA  (Q9TGD8    ), 
COX1_SEPOF  (Q8WEW3    ), COX1_SEPPH  (Q957T2    ), COX1_THETH  (Q56408    )
» more

PDB
[Detailed view]
108 PDB

1AR1; 1EHK; 1FFT; 1M56; 1M57; 1OCC; 1OCO; 1OCR; 1OCZ; 1QLE; 1V54; 1V55; 1XME; 2DYR; 2DYS; 2EIJ; 2EIK; 2EIL; 2EIM; 2EIN; 2GSM; 2OCC; 2QPD; 2QPE; 2Y69; 2YBB; 2YEV; 2ZXW; 3ABK; 3ABL; 3ABM; 3AG1; 3AG2; 3AG3; 3AG4; 3ASN; 3ASO; 3BVD; 3DTU; 3EH3; 3EH4; 3EH5; 3EHB; 3FYE; 3FYI; 3HB3; 3MK7; 3O0R; 3QJQ; 3QJR; 3QJS; 3QJT; 3QJU; 3QJV; 3S33; 3S38; 3S39; 3S3A; 3S3B; 3S3C; 3S3D; 3S8F; 3S8G; 3WFB; 3WFC; 3WFD; 3WFE; 3WG7; 3X2Q; 4FA7; 4FAA; 4GP4; 4GP5; 4GP8; 4N4Y; 5B1A; 5B1B; 5B3S; 5DJQ; 5GUW; 5GUX; 5IY5; 5LUF; 5NDC; 5W97; 5WAU; 5WEH; 5X19; 5X1B; 5X1F; 5XDQ; 5XDX; 5Z62; 5Z84; 5Z85; 5Z86; 5ZCO; 5ZCP; 5ZCQ; 6CI0; 6GIQ; 6HU9; 6J8M; 6JY3; 6JY4; 6NKN; 6NMF; 6NMP
» more

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