PROSITE logo

PROSITE entry PS00082


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
PURL: https://purl.expasy.org/prosite/signature/PS00082

Direct ScanProsite submission
General information about the entry

Entry name [info] EXTRADIOL_DIOXYGENAS
Accession [info] PS00082
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-NOV-1995 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00078

Name and characterization of the entry

Description [info] Extradiol ring-cleavage dioxygenases signature.
Pattern [info] 
[GNTIV]-x-H-x(5,7)-[LIVMF]-Y-x(2)-[DENTA]-P-x-[GP]-x(2,3)-E.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2026_03 which contains 575'748 sequence entries.


Total number of hits 30 in 30 different sequences
Number of true positive hits 27 in 27 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 5
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 90.00 %
Recall (true positives / (true positives + false negatives)) 84.38 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] iron at position 13
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 27 sequences 

BPHC1_RHOGO (P47231), BPHC2_RHOGO (P47232), BPHC3_RHOGO (P47233), 

BPHC_METFU  (P08695), BPHC_PARXL  (P47228), BPHC_PSES1  (P17297), 
BPHC_SPHPI  (P11122), CADE_BACSU  (P54721), CATA_RHORH  (Q53034), 
CMTC_PSEPU  (Q51976), DBFB_SPHPI  (P47243), DMPB_PSEUF  (P17262), 
HSAC_MYCTO  (P9WNW6), HSAC_MYCTU  (P9WNW7), HSAC_RHOJR  (Q9KWQ5), 
MPC2_CUPNE  (P17296), NAHC1_PSEPU (P11861), NAHC2_PSEPU (P0A109), 
NAHC_PSEAI  (P0A107), NAHC_PSEU8  (P0A108), NAHH_PSEPU  (P08127), 
NSAC_SPHXE  (P74836), PHEB_GEOSE  (P31003), TODE_PSEP1  (P13453), 
XYLE1_PSEPU (P06622), XYLE2_PSEPU (Q04285), XYLE_PSEAI  (P27887)
» more

UniProtKB/Swiss-Prot
False negative sequences		 5 sequences 

DHBA_PSERE  (I6X9J4), LINE_SPHIU  (Q9WXE6), MHQA_BACSU  (O34689), 

MHQE_BACSU  (O34543), MHQO_BACSU  (P96693)
» more

UniProtKB/Swiss-Prot
False positive sequences		 3 sequences 

BAME_NITEU  (Q82WP8), GLGB3_ARATH (D2WL32), GRF8_ARATH  (Q9SU44)


				
	

	

		PDB
[Detailed view]		
		
			24 PDB
			


			pdb_00001dhy; pdb_00001eil; pdb_00001eiq; pdb_00001eir; pdb_00001han; pdb_00001kmy; pdb_00001knd; pdb_00001knf; pdb_00001kw3; pdb_00001kw6; pdb_00001kw8; pdb_00001kw9; 
			
				pdb_00001kwb; pdb_00001kwc; pdb_00001lgt; pdb_00001lkd; pdb_00001mpy; pdb_00002ehz; pdb_00002ei0; pdb_00002ei1; pdb_00002ei2; pdb_00002ei3; pdb_00002zi8; pdb_00002zyq
			
			

			» more