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Entry: PS00082 |
Entry name [info] | EXTRADIOL_DIOXYGENAS |
Accession [info] | PS00082 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-NOV-1995 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00078 |
Description [info] | Extradiol ring-cleavage dioxygenases signature. |
Pattern [info] |
[GNTIV]-x-H-x(5,7)-[LIVMF]-Y-x(2)-[DENTA]-P-x-[GP]-x(2,3)-E. |
Total number of hits | 29 in 29 different sequences |
Number of true positive hits | 26 in 26 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 3 in 3 different sequences |
Number of false negative sequences | 4 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 89.66 % |
Recall (true positives / (true positives + false negatives)) | 86.67 % |
Taxonomic range [info] | Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Site [info] | iron at position 13 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
26 sequences
BPHC1_RHOGO (P47231 ), BPHC2_RHOGO (P47232 ), BPHC3_RHOGO (P47233 ), BPHC_PARXL (P47228 ), BPHC_PSEFK (P08695 ), BPHC_PSES1 (P17297 ), BPHC_SPHPI (P11122 ), CADE_BACSU (P54721 ), CATA_RHORH (Q53034 ), DBFB_SPHPI (P47243 ), DMPB_PSEUF (P17262 ), HSAC_MYCTO (P9WNW6 ), HSAC_MYCTU (P9WNW7 ), HSAC_RHOJR (Q9KWQ5 ), MPC2_CUPNE (P17296 ), NAHC1_PSEPU (P11861 ), NAHC2_PSEPU (P0A109 ), NAHC_PSEAI (P0A107 ), NAHC_PSEU8 (P0A108 ), NAHH_PSEPU (P08127 ), NSAC_SPHXE (P74836 ), PHEB_GEOSE (P31003 ), TODE_PSEP1 (P13453 ), XYLE1_PSEPU (P06622 ), XYLE2_PSEPU (Q04285 ), XYLE_PSEAI (P27887 )» more
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UniProtKB/Swiss-Prot False negative sequences |
4 sequences
LINE_SPHJU (Q9WXE6 ), MHQA_BACSU (O34689 ), MHQE_BACSU (O34543 ), MHQO_BACSU (P96693 )» more |
UniProtKB/Swiss-Prot False positive sequences |
3 sequences
BAME_NITEU (Q82WP8 ), GLGB3_ARATH (D2WL32 ), GRF8_ARATH (Q9SU44 ) |
PDB [Detailed view] |
24 PDB
1DHY; 1EIL; 1EIQ; 1EIR; 1HAN; 1KMY; 1KND; 1KNF; 1KW3; 1KW6; 1KW8; 1KW9; 1KWB; 1KWC; 1LGT; 1LKD; 1MPY; 2EHZ; 2EI0; 2EI1; 2EI2; 2EI3; 2ZI8; 2ZYQ » more |