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PROSITE entry PS00083


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General information about the entry

Entry name [info] INTRADIOL_DIOXYGENAS
Accession [info] PS00083
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00079

Name and characterization of the entry

Description [info] Intradiol ring-cleavage dioxygenases signature.
Pattern [info] 
[LIVMF]-x-G-x-[LIVM]-x(4)-[GS]-x(2)-[LIVMA]-x(4)-[LIVM]-[DE]-[LIVMFYC]-
x(6)-G-x-[FY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 24 in 24 different sequences
Number of true positive hits 23 in 23 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 1
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 95.83 %
Recall (true positives / (true positives + false negatives)) 95.83 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] iron at position 17
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 23 sequences 

CATA1_ACILW (O33948), CATA2_ACILW (O33950), CATA_ACIAD  (P07773), 

CATA_ACIGI  (Q43984), CATA_RHOOP  (P95607), CHQB_NOCSI  (Q5PXQ6), 
CLCA_PSEPU  (P11451), CLCA_RHOOP  (O67987), GRAB_RHIS5  (A1IIX3), 
HQD2_CANAL  (P86029), HXQD1_CORGL (Q8NR92), HXQD2_CORGL (Q8NL92), 
NPCC_RHOOP  (Q6F4M7), PCXA_ACIAD  (P20371), PCXA_BURCE  (P15109), 
PCXA_PSEPU  (P00436), PCXB_ACIAD  (P20372), PCXB_BURCE  (P15110), 
PCXB_PSEPU  (P00437), PHEB_PSEUE  (P31019), TCBC_PSESQ  (P27098), 
TFDC_BURCE  (P0A397), TFDC_CUPPJ  (P0A396)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

TCPC_CUPPJ  (Q471I0)


				
	

	

		UniProtKB/Swiss-Prot
'Partial' sequences		
		
			4 sequences
			


			
CATA_ACICA  (P83715), CATA_ACIRA  (P81422), TFDC1_DELAC (P83115), 

			
TFDC2_DELAC (P83116)


			
			» more
			


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			1 sequence
			


			
RLP31_ARATH (Q8RX63)


				
	

	

		PDB
[Detailed view]		
		
			73 PDB
			


			1DLM; 1DLQ; 1DLT; 1DMH; 1EO2; 1EO9; 1EOA; 1EOB; 1EOC; 1S9A; 1TMX; 1YKK; 
			
				1YKL; 1YKM; 1YKN; 1YKO; 1YKP; 2BUM; 2BUQ; 2BUR; 2BUT; 2BUU; 2BUV; 2BUW; 
				2BUX; 2BUY; 2BUZ; 2BV0; 2PCD; 3HGI; 3HHX; 3HHY; 3HJ8; 3HJQ; 3HJS; 3HKP; 
				3I4V; 3I4Y; 3I51; 3LKT; 3LMX; 3LXV; 3MFL; 3MI1; 3MI5; 3MV4; 3MV6; 3O32; 
				3O5U; 3O6J; 3O6R; 3PCA; 3PCB; 3PCC; 3PCD; 3PCE; 3PCF; 3PCG; 3PCH; 3PCI; 
				3PCJ; 3PCK; 3PCL; 3PCM; 3PCN; 3T63; 3T67; 3TH1; 4WHO; 4WHP; 4WHQ; 4WHR; 
				4WHS
			
			

			» more