PROSITE entry PS00087
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PURL: https://purl.expasy.org/prosite/signature/PS00087
Direct ScanProsite submission
General information about the entry
| Entry name [info] | SOD_CU_ZN_1 |
| Accession [info] | PS00087 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00082 |
Name and characterization of the entry
| Description [info] | Copper/Zinc superoxide dismutase signature 1. |
| Pattern [info] |
[GA]-[IMFAT]-H-[LIVF]-H-{S}-x-[GP]-[SDG]-x-[STAGDE].
|
Numerical results [info]
| Total number of hits | 182 in 182 different sequences |
| Number of true positive hits | 154 in 154 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 28 in 28 different sequences |
| Number of false negative sequences | 27 |
| Number of 'partial' sequences | 11 |
| Precision (true positives / (true positives + false positives)) | 84.62 % |
| Recall (true positives / (true positives + false negatives)) | 85.08 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses |
| Maximum number of repetitions [info] | 1 |
| Site [info] | copper at position 3 |
| Site [info] | copper at position 5 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
154 sequences
SOD1A_XENLA (P13926), SOD1B_XENLA (P15107), SODA_TALMA (Q19VG9), SODA_TALMQ (B6QEB3), SODC1_ARATH (P24704), SODC1_BRAJU (Q42611), SODC1_DEBHA (O42724), SODC1_DICDI (Q55GQ5), SODC1_MESCR (P93258), SODC1_ORYSI (A2XGP6), SODC1_ORYSJ (Q0DRV6), SODC1_SOLLC (P14830), SODC2_ARATH (O78310), SODC2_BRAJU (Q42612), SODC2_DICDI (Q54RN1), SODC2_MAIZE (P11428), SODC2_MESCR (O49044), SODC2_OLEEU (Q8L5E0), SODC2_ORYSJ (P28757), SODC2_SOLLC (Q43779), SODC3_DICDI (Q54RQ1), SODC4_DICDI (Q54TU5), SODC4_MAIZE (P23345), SODC5_DICDI (Q54G70), SODC5_MAIZE (P23346), SODC6_DICDI (Q54TW8), SODCP_MEDSA (O65198), SODCP_ORYSJ (P93407), SODCP_PEA (P11964), SODCP_PETHY (P10792), SODCP_PINSY (P24707), SODCP_SOLCS (O04997), SODCP_SOLLC (P14831), SODCP_SPIOL (P07505), SODCP_VITVI (O65199), SODCP_ZANAE (O65175), SODC_ACTPL (P24702), SODC_ANACO (Q9SQL5), SODC_ASPFL (Q8X1S6), SODC_ASPFU (Q9Y8D9), SODC_ASPJA (Q12548), SODC_ASPNC (A2QMY6), SODC_ASPNG (P85978), SODC_ASPOR (Q877B5), SODC_BOMMO (P82205), SODC_BOSMU (Q52RN5), SODC_BOTFU (Q70Q35), SODC_BOVIN (P00442), SODC_BRAOC (P09678), SODC_BRUAB (P15453), SODC_BRUME (P66826), SODC_BRUPA (P41962), SODC_BRUSU (P66827), SODC_CAEBR (A8XCP3), SODC_CAEEL (P34697), SODC_CALJA (Q8HXP8), SODC_CAMDR (H6BDU4), SODC_CANAX (O59924), SODC_CANGA (Q6FWL5), SODC_CAPAN (O22373), SODC_CAPHI (Q5FB29), SODC_CARCR (P80174), SODC_CARPA (O65768), SODC_CAUVC (P20379), SODC_CAVPO (P33431), SODC_CERCA (P28755), SODC_CEREL (O46412), SODC_CHICK (P80566), SODC_CHYAM (Q07182), SODC_CLAP2 (Q96VL0), SODC_COLGL (O94178), SODC_CORMI (Q8J0N2), SODC_CORTN (Q8J0N3), SODC_CRYGA (Q9C0N4), SODC_CRYNH (J9VLJ9), SODC_DANRE (O73872), SODC_DROBS (P54407), SODC_DROER (Q9U4X4), SODC_DROMA (P61853), SODC_DROMD (Q95081), SODC_DROME (P61851), SODC_DROMI (Q95079), SODC_DROOB (Q95085), SODC_DROOR (Q9U4X5), SODC_DROPB (Q95087), SODC_DROPE (Q95088), SODC_DROPS (Q95086), SODC_DROSE (P61854), SODC_DROSI (P61852), SODC_DROTE (Q9U4X2), SODC_DROVI (P10791), SODC_DROWI (P41973), SODC_DROYA (Q9U4X3), SODC_EMENI (Q9HEY7), SODC_EREGS (Q751L8), SODC_FRATH (Q59448), SODC_HAECO (Q27666), SODC_HAEDU (Q59452), SODC_HAEPA (P25842), SODC_HALRO (P81926), SODC_HORSE (P00443), SODC_HUMAN (P00441), SODC_HUMLT (P83684), SODC_HYLLA (Q8HXQ3), SODC_IPOBA (Q07796), SODC_KLULA (Q6CPE2), SODC_LAMCR (P81036), SODC_MACFA (Q8HXQ1), SODC_MACFU (Q8HXQ2), SODC_MACMU (Q8HXQ0), SODC_MOUSE (P08228), SODC_NEIMA (P57005), SODC_NEIMB (Q59623), SODC_NEUCR (P07509), SODC_NICPL (P27082), SODC_NPVAC (P24705), SODC_NPVOP (O12933), SODC_ONCVO (P24706), SODC_PANGI (O22668), SODC_PANTR (P60052), SODC_PASMU (Q59689), SODC_PAUKA (O49073), SODC_PBCV1 (Q90023), SODC_PEA(Q02610), SODC_PHOLE (P00446), SODC_PIG(P04178), SODC_PINSY (P24669), SODC_PODAS (Q711T9), SODC_PONPY (Q8HXQ4), SODC_PRIGL (P11418), SODC_RAT(P07632), SODC_SAPAP (Q8HXP9), SODC_SCHMA (Q01137), SODC_SCHPO (P28758), SODC_SHEEP (P09670), SODC_SOLCS (O04996), SODC_SOYBN (Q7M1R5), SODC_SPIOL (P22233), SODC_XENTR (Q0IIW3), SODC_XIPGL (P03946), SODC_YARLI (Q6C662), SODC_YEAST (P00445), SODC_ZANAE (O65174), SODC_ZINOF (C0HK70), SODE_BRUPA (P41963), SODE_CAEEL (P34461), SODE_DROME (Q7JR71), SODE_HAECO (P51547), SODE_HUMAN (P08294), SODE_MOUSE (O09164), SODE_ONCVO (Q07449), SODE_RABIT (P41975), SODE_RAT(Q08420), SODE_SCHMA (P16026)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
27 sequences
CCS1_DEBHA (Q6BK66), CCS_DICDI (Q54F73), CCS_HUMAN (O14618), CCS_MOUSE (Q9WU84), CCS_PIG (Q6PWT7), CCS_RAT (Q9JK72), SODC1_AQUAE (O67149), SODC1_SALT4 (E8XDJ8), SODC1_SALTY (P0CW86), SODC2_AQUAE (O66602), SODCP_POPTM (P36214), SODC_DEIRA (Q9RU48), SODC_DROTO (Q95095), SODC_ECO57 (P0AGD2), SODC_ECOLI (P0AGD1), SODC_HAEIF (P25841), SODC_LEGPH (Q5ZT17), SODC_LEGPN (P69049), SODC_MYCBO (P0A609), SODC_MYCLE (Q9CBI6), SODC_MYCPA (Q9AGW2), SODC_MYCTO (P9WGE8), SODC_MYCTU (P9WGE9), SODC_RABIT (P09212), SODC_SALTY (O68901), SODE_DIRIM (P41974), YOJM_BACSU (O31851)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
11 sequences
SODC1_OLEEU (P80740), SODC2_DEBHN (P82902), SODC2_PICAB (P29428), SODCP_PICAB (P29427), SODCP_PINPS (P81082), SODC_AGGAC (Q59081), SODC_AQUCT (P23417), SODC_HORVU (P34936), SODC_MANHA (Q51853), SODC_PAROL (P83129), SODC_STRHE (P81163)» more |
| UniProtKB/Swiss-Prot False positive sequences |
28 sequences
BURS_PERAM (P84118), CYSA_STRCO (Q59829), FABH_BORBR (Q7WD20), FABH_BORPA (Q7W5I4), FABH_BORPE (Q7VW29), GYRB_PSEPU (P13364), HUTI_DEIRA (Q9RZ05), RPOC_CHLL2 (B3EER3), SYA_BURA4 (B1YNJ6), SYA_BURCH (A0K6N4), SYA_BURCM (Q0BG79), SYA_BURM7 (A3MJ36), SYA_BURM9 (A2S3D4), SYA_BURMA (Q62KZ3), SYA_BURMS (A1V3F2), SYA_BURO0 (B1K026), SYA_BURO1 (Q1BX19), SYA_BURP0 (A3NUB0), SYA_BURP1 (Q3JT87), SYA_BURP6 (A3N8K7), SYA_BURPS (Q63TF9), SYA_BURTA (Q2SV73), SYA_CUPNH (Q0K823), SYA_CUPPJ (Q474F4), SYA_GEOSL (P61701), SYA_METTH (O27718), SYA_PARPJ (B2SZN0), SYA_PARXL (Q13W97)» more |
| PDB [Detailed view] |
183 PDB
pdb_00001azv; pdb_00001b4l; pdb_00001bzo; pdb_00001cb4; pdb_00001cbj; pdb_00001cob; pdb_00001e9o; pdb_00001e9p; pdb_00001e9q; pdb_00001f18; pdb_00001f1g; pdb_00001fun; pdb_00001hl4; pdb_00001hl5; pdb_00001ib5; pdb_00001ibb; pdb_00001ibd; pdb_00001ibf; pdb_00001ibh; pdb_00001jcv; pdb_00001l3n; pdb_00001n18; pdb_00001n19; pdb_00001oaj; pdb_00001oal; pdb_00001ozu; pdb_00001p1v; pdb_00001ptz; pdb_00001pu0; pdb_00001q0e; pdb_00001sda; pdb_00001sdy; pdb_00001sos; pdb_00001spd; pdb_00001srd; pdb_00001sxa; pdb_00001sxb; pdb_00001sxc; pdb_00001sxn; pdb_00001sxs; pdb_00001sxz; pdb_00001to4; pdb_00001to5; pdb_00001uxl; pdb_00001uxm; pdb_00001xso; pdb_00001yai; pdb_00001yaz; pdb_00001yso; pdb_00001z9n; pdb_00001z9p; pdb_00002aeo; pdb_00002af2; pdb_00002aps; pdb_00002aqn; pdb_00002aqp; pdb_00002aqq; pdb_00002aqr; pdb_00002aqs; pdb_00002aqt; pdb_00002c9s; pdb_00002c9u; pdb_00002c9v; pdb_00002gbt; pdb_00002gbu; pdb_00002gbv; pdb_00002jcw; pdb_00002jlp; pdb_00002lu5; pdb_00002mp3; pdb_00002nam; pdb_00002r27; pdb_00002sod; pdb_00002v0a; pdb_00002vr6; pdb_00002vr7; pdb_00002vr8; pdb_00002wko; pdb_00002wyt; pdb_00002wyz; pdb_00002wz0; pdb_00002wz5; pdb_00002wz6; pdb_00002z7u; pdb_00002z7w; pdb_00002z7y; pdb_00002z7z; pdb_00002zkw; pdb_00002zkx; pdb_00002zky; pdb_00002zow; pdb_00003cqp; pdb_00003cqq; pdb_00003ecu; pdb_00003ecv; pdb_00003gtt; pdb_00003gtv; pdb_00003gzo; pdb_00003gzp; pdb_00003gzq; pdb_00003h2p; pdb_00003h2q; pdb_00003hog; pdb_00003hw7; pdb_00003kbe; pdb_00003kbf; pdb_00003kh3; pdb_00003kh4; pdb_00003km1; pdb_00003km2; pdb_00003l9e; pdb_00003l9y; pdb_00003ltv; pdb_00003mkg; pdb_00003pu7; pdb_00003qqd; pdb_00003re0; pdb_00003s0p; pdb_00003sod; pdb_00003t5w; pdb_00004a7g; pdb_00004a7q; pdb_00004a7s; pdb_00004a7t; pdb_00004a7u; pdb_00004a7v; pdb_00004b3e; pdb_00004ff9; pdb_00004l05; pdb_00004mcm; pdb_00004mcn; pdb_00004oh2; pdb_00005in2; pdb_00005k02; pdb_00005o3y; pdb_00005o40; pdb_00005yto; pdb_00005ytu; pdb_00005yul; pdb_00006a9o; pdb_00006dtk; pdb_00006ffk; pdb_00006foi; pdb_00006fol; pdb_00006fon; pdb_00006fp6; pdb_00006spa; pdb_00006sph; pdb_00006spi; pdb_00006spj; pdb_00006spk; pdb_00006z3v; pdb_00006z4g; pdb_00006z4h; pdb_00006z4i; pdb_00006z4j; pdb_00006z4k; pdb_00006z4l; pdb_00006z4m; pdb_00006z4o; pdb_00007fb6; pdb_00007fb9; pdb_00007nxx; pdb_00007t8e; pdb_00007t8f; pdb_00007t8g; pdb_00007t8h; pdb_00007vzf; pdb_00007xx3; pdb_00008ccx; pdb_00008gsq; pdb_00008ihu; pdb_00008iq0; pdb_00008iq1; pdb_00008k33; pdb_00008k3a; pdb_00008k3l; pdb_00008q6m; pdb_00008yat; pdb_00008yd3; pdb_00009iyk; pdb_00009jbo; pdb_00009jbp » more |