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PROSITE entry PS00098


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General information about the entry

Entry name [info] THIOLASE_1
Accession [info] PS00098
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00092

Name and characterization of the entry

Description [info] Thiolases acyl-enzyme intermediate signature.
Pattern [info] 
[LIVM]-[NST]-{T}-x-C-[SAGLI]-[ST]-[SAG]-[LIVMFYNS]-x-[STAG]-[LIVM]-x(6)-
[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 276 in 276 different sequences
Number of true positive hits 262 in 262 different sequences
Number of 'unknown' hits 1
Number of false positive hits 13 in 13 different sequences
Number of false negative sequences 48
Number of 'partial' sequences 3
Precision (true positives / (true positives + false positives)) 95.27 %
Recall (true positives / (true positives + false negatives)) 84.52 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] involved_formation_acyl-enzyme_intermediate at position 5
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 262 sequences 

ACCT2_ARATH (Q8S4Y1), ATOB_ECOLI  (P76461), ATOB_HAEIN  (P44873), 

ATOB_PSEAE  (Q9I2A8), BKTB_CUPNH  (Q0KBP1), CATF_ACIAD  (Q43935), 
ECHB_BOVIN  (O46629), ECHB_HUMAN  (P55084), ECHB_MACFA  (Q8HXX4), 
ECHB_MOUSE  (Q99JY0), ECHB_PANTR  (Q5R1W7), ECHB_RAT(Q60587), 
ECHH_CAEEL  (P34255), ER10A_ASPFC (B0XMC1), ER10A_ASPFU (Q4WLA8), 
ER10A_GIBZE (I1RMA2), ER10B_ASPFC (B0YA65), ER10B_ASPFU (Q4WCL5), 
ER10B_GIBZE (I1RY81), ERG10_CANAL (A0A1D8PH52), ERG10_SACMO (P10551), 
ERG10_YEAST (P41338), FADA4_MYCBO (P66927), FADA4_MYCLE (P46707), 
FADA4_MYCS2 (A0R1Y7), FADA4_MYCTO (P9WG68), FADA4_MYCTU (P9WG69), 
FADA_ACIAD  (Q6FF69), FADA_ACIB3  (B7H1I1), FADA_ACIB5  (B7I3P0), 
FADA_ACIBC  (B2I2J8), FADA_ACIBS  (B0VLX5), FADA_ACIBT  (A3M1H9), 
FADA_ACIBY  (B0VE46), FADA_AERHH  (A0KEL0), FADA_AERS4  (A4STF3), 
FADA_ALCBS  (Q0VNZ7), FADA_ALIF1  (Q5E8X7), FADA_ALIFM  (B5FEW7), 
FADA_ALISL  (B6EGU1), FADA_BACSU  (O32177), FADA_CHRSD  (Q1QUW9), 
FADA_CITK8  (A8ACZ3), FADA_COLP3  (Q489W4), FADA_CROS8  (A7MQM5), 
FADA_ECO24  (A7ZU50), FADA_ECO57  (Q8X8J4), FADA_ECOHS  (A8A6V0), 
FADA_ECOK1  (A1AI32), FADA_ECOL5  (Q0TAL1), FADA_ECOL6  (Q8FBI3), 
FADA_ECOLI  (P21151), FADA_ECOUT  (Q1R467), FADA_ENT38  (A4WFX5), 
FADA_ENTCL  (Q9F0Y6), FADA_ERWT9  (B2VFE0), FADA_ESCF3  (B7LTZ0), 
FADA_HAHCH  (Q2SD23), FADA_IDILO  (Q5QXH8), FADA_KLEP7  (A6TGM3), 
FADA_MARMS  (A6VVM8), FADA_MARN8  (A1TZR8), FADA_PECAS  (Q6DAP6), 
FADA_PECCP  (C6DI66), FADA_PHOLL  (Q7MZ91), FADA_PHOPR  (Q6LW07), 
FADA_PSE14  (Q48GW4), FADA_PSEA6  (Q15ZF4), FADA_PSEA7  (A6V383), 
FADA_PSEAB  (Q02PH7), FADA_PSEAE  (Q9HZJ3), FADA_PSEE4  (Q1I7D5), 
FADA_PSEF5  (Q4KFC3), FADA_PSEFR  (P28790), FADA_PSEMY  (A4XSM9), 
FADA_PSEOL  (Q93Q11), FADA_PSEP1  (A5W6G9), FADA_PSEPF  (Q3K9D9), 
FADA_PSEPK  (Q88L01), FADA_PSEPU  (Q9R9W0), FADA_PSESM  (Q87ZB3), 
FADA_PSET1  (Q3IJ24), FADA_PSEU2  (Q4ZRA1), FADA_PSYA2  (Q4FQC7), 
FADA_PSYCK  (Q1Q8K0), FADA_PSYWF  (A5WH98), FADA_SACD2  (Q21KB1), 
FADA_SALCH  (Q57HM7), FADA_SALPA  (Q5PKQ3), FADA_SALTI  (P0A2H8), 
FADA_SALTY  (P0A2H7), FADA_SERP5  (A8G8D0), FADA_SHEAM  (A1S1I7), 
FADA_SHEB5  (A3CYJ3), FADA_SHEB8  (A6WH99), FADA_SHEDO  (Q12TB5), 
FADA_SHEFN  (Q08A40), FADA_SHELP  (A3Q8U3), FADA_SHEON  (Q8EKS0), 
FADA_SHEPC  (A4Y1B5), FADA_SHESA  (A0KR49), FADA_SHESM  (Q0HPB8), 
FADA_SHESR  (Q0I0T4), FADA_SHESW  (A1RDW3), FADA_SHIBS  (Q31UE3), 
FADA_SHIDS  (Q32A20), FADA_SHIF8  (Q0SZ35), FADA_SHIFL  (Q83PG2), 
FADA_SHISS  (Q3YVC2), FADA_STUS1  (A4VKA4), FADA_VIBC3  (A5F464), 
FADA_VIBCH  (Q9KNI0), FADA_VIBPA  (Q87TP0), FADA_VIBVU  (Q8DDK5), 
FADA_VIBVY  (Q7MQI0), FADA_YERE8  (A1JIG3), FADA_YERP3  (A7FDF1), 
FADA_YERPA  (Q1C2C3), FADA_YERPE  (Q8ZAM9), FADA_YERPN  (Q1CNA0), 
FADA_YERPP  (A4TR28), FADA_YERPS  (Q66FR9), FADI_AERHH  (A0KK76), 
FADI_AERS4  (A4SMT9), FADI_CITK8  (A8ADP1), FADI_CROS8  (A7MH80), 
FADI_ECO24  (A7ZPF9), FADI_ECO27  (B7UFZ9), FADI_ECO45  (B7MGV8), 
FADI_ECO55  (B7LBJ6), FADI_ECO57  (Q8XCN9), FADI_ECO5E  (B5YXY5), 
FADI_ECO7I  (B7NP25), FADI_ECO81  (B7MY17), FADI_ECO8A  (B7M6M3), 
FADI_ECOBW  (C4ZVN3), FADI_ECODH  (B1X9L5), FADI_ECOHS  (A8A2L1), 
FADI_ECOK1  (A1ADI9), FADI_ECOL5  (Q0TFA5), FADI_ECOL6  (Q8FFG3), 
FADI_ECOLC  (B1IXA4), FADI_ECOLI  (P76503), FADI_ECOLU  (B7N5V3), 
FADI_ECOSE  (B6I6Q5), FADI_ECOSM  (B1LME8), FADI_ECOUT  (Q1R971), 
FADI_ENT38  (A4WCW7), FADI_ERWT9  (B2VJ10), FADI_ESCF3  (B7LLC9), 
FADI_KLEP3  (B5XVW1), FADI_KLEP7  (A6TC20), FADI_PECAS  (Q6D2L6), 
FADI_PECCP  (C6DAL8), FADI_PHOLL  (Q7N287), FADI_PSET1  (Q3IEE3), 
FADI_SALA4  (B5EZS0), FADI_SALAR  (A9MJ36), FADI_SALCH  (Q57LW5), 
FADI_SALDC  (B5FPN2), FADI_SALEP  (B5R3S0), FADI_SALHS  (B4TCA9), 
FADI_SALNS  (B4SZR1), FADI_SALPA  (Q5PCX7), FADI_SALPB  (A9N452), 
FADI_SALPC  (C0PZX5), FADI_SALPK  (B5BBA0), FADI_SALSV  (B4TQC3), 
FADI_SALTI  (Q8Z4Y9), FADI_SALTY  (Q8ZNA6), FADI_SERP5  (A8GH87), 
FADI_SHIB3  (B2TWV5), FADI_SHIBS  (Q31YB6), FADI_SHIDS  (Q32DJ3), 
FADI_SHIF8  (Q0T2E5), FADI_SHIFL  (Q83K95), FADI_SHISS  (Q3YZM1), 
FADI_YERE8  (A1JK23), FADI_YERP3  (A7FGK0), FADI_YERPA  (Q1C659), 
FADI_YERPB  (B2K8J6), FADI_YERPE  (Q8ZD46), FADI_YERPG  (A9R7W9), 
FADI_YERPN  (Q1CHK1), FADI_YERPP  (A4TM83), FADI_YERPS  (Q668V0), 
FADI_YERPY  (B1JGG1), KAT1_PETHY  (C8YNG6), NLTP2_CAEEL (G5EDP2), 
PAAJ_ECOLI  (P0C7L2), PAAJ_ECOLX  (P0C7L3), PCAF_ACIAD  (Q43974), 
PCAF_PSEAE  (Q9I6R0), PCAF_PSEKB  (Q8VPF1), PCAF_PSEPU  (Q51956), 
PIGA_MONRU  (A0A0S2CHA9), PKS11_TALMA (D7RJN5), PKSM_BACSU  (P40872), 
PKSR_BACSU  (O31784), SCP2_BOVIN  (P07857), SCP2_CHICK  (Q07598), 
SCP2_HUMAN  (P22307), SCP2_MOUSE  (P32020), SCP2_RABIT  (O62742), 
SCP2_RAT(P11915), TAS1_CORMM  (G3J9P0), THIA_CANTR  (Q12598), 
THIB_CANTR  (Q04677), THIK1_ARATH (Q8LF48), THIK2_ARATH (Q56WD9), 
THIK5_ARATH (Q570C8), THIKA_CANTR (P33290), THIKA_MOUSE (Q921H8), 
THIKA_RAT   (P21775), THIKB_CANTR (P33291), THIKB_MOUSE (Q8VCH0), 
THIKB_RAT   (P07871), THIK_ENCCU  (Q8SVA6), THIK_HUMAN  (P09110), 
THIK_YARLI  (Q05493), THIK_YEAST  (P27796), THIL1_DICDI (Q86AD9), 
THILA_XENLA (Q6NU46), THILB_XENLA (Q6GN02), THILH_CAEEL (Q22100), 
THIL_ALLVD  (P45369), THIL_BOVIN  (Q29RZ0), THIL_CHRVO  (Q9ZHI1), 
THIL_CUPNH  (P14611), THIL_DANRE  (Q6AZA0), THIL_HUMAN  (P24752), 
THIL_MACFA  (Q8HXY6), THIL_MOUSE  (Q8QZT1), THIL_PARDE  (P54810), 
THIL_RAT(P17764), THIL_RHIME  (P50174), THIL_SHIZO  (P07097), 
THIL_THIVI  (P45363), THIL_XENTR  (Q5BKN8), THIL_YARLI  (Q6L8K7), 
THIM_BOVIN  (Q3T0R7), THIM_HUMAN  (P42765), THIM_MOUSE  (Q8BWT1), 
THIM_PONAB  (Q5RES5), THIM_RAT(P13437), THLA_CLOAB  (P45359), 
THLA_CLOD6  (Q18AR0), THLA_STAA3  (Q2FJQ9), THLA_STAA8  (Q2G124), 
THLA_STAAB  (Q2YVF5), THLA_STAAC  (Q5HIU0), THLA_STAAM  (Q99WM3), 
THLA_STAAN  (Q7A7L2), THLA_STAAR  (Q6GJW4), THLA_STAAS  (Q6GCB8), 
THLA_STAAW  (Q8NY95), THLA_STAEQ  (Q5HS07), THLA_STAES  (Q8CQN7), 
THLA_SYNWW  (Q0AVM3), THL_BACSU   (P45855), Y0859_MYCTU (O53871), 
YQEF_ECOLI  (Q46939)
» more

UniProtKB/Swiss-Prot
False negative sequences		 48 sequences 

AACT1_ARATH (Q9FIK7), FADA5_MYCTU (I6XHI4), FADA6_MYCTU (I6XHJ3), 

FADI_ALIF1  (Q5E3U0), FADI_ALIFM  (B5FGB5), FADI_ALTMD  (B4RTU9), 
FADI_COLP3  (Q47ZB6), FADI_IDILO  (Q5QXN5), FADI_PHOPR  (Q6LTK4), 
FADI_PSEA6  (Q15VA3), FADI_SHEAM  (A1S7L7), FADI_SHEB2  (B8EE97), 
FADI_SHEB5  (A3D685), FADI_SHEB8  (A6WQ26), FADI_SHEB9  (A9KTW7), 
FADI_SHEDO  (Q12P12), FADI_SHEFN  (Q07ZP7), FADI_SHEHH  (B0TL22), 
FADI_SHELP  (A3QFP4), FADI_SHEON  (Q8ECP6), FADI_SHEPA  (A8H5T2), 
FADI_SHEPC  (A4Y898), FADI_SHEPW  (B8CPY7), FADI_SHESA  (A0KV75), 
FADI_SHESH  (A8FTR6), FADI_SHESM  (Q0HKD2), FADI_SHESR  (Q0HWN4), 
FADI_SHESW  (A1RI91), FADI_SHEWM  (B1KKT1), FADI_VIBC3  (A5F2P1), 
FADI_VIBCH  (Q9KT59), FADI_VIBPA  (Q87MM2), FADI_VIBVU  (Q8DB48), 
FADI_VIBVY  (Q7MIS4), THIC_HUMAN  (Q9BWD1), THIC_MOUSE  (Q8CAY6), 
THIC_RAT(Q5XI22), VRAB_STAA1  (Q9KWK4), VRAB_STAAC  (Q5HIA0), 
VRAB_STAAM  (Q7A2W9), VRAB_STAAN  (Q7A768), VRAB_STAAR  (Q6GJ93), 
VRAB_STAAS  (Q6GBR1), VRAB_STAAW  (Q7A1P9), VRAB_STAEQ  (Q5HRH3), 
VRAB_STAES  (Q8CTR0), VRAB_STAHJ  (Q4L3Q1), YHFS_BACSU  (O07618)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 3 sequences 

THIL_PIG(P14610), THLA_CLODI  (P45362), THLA_CLOPA  (P81347)


				
	

	

		UniProtKB/Swiss-Prot
'Unknown' sequences		
		
			1 sequence
			


			
PKS11_TALMQ (B6QK76)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			13 sequences
			


			
C9B51_TRIFG (A0A517FNC6), DPASA_APISA (P9WEX0), DPMAA_METAN (P9WEX6), 

			
EPAA_ASPNC  (A2QTE9), NODE_RHIME  (P06230), NODE_RHIS3  (P72331), 
NOE4_RHIML  (P06231), PKS1_SARSH  (A5PHD6), POMT2_DANRE (F1Q8R9), 
SERB2_ARATH (Q9SHP0), SORB_HYPJQ  (G0R6S9), STRU3_BPPAJ (P85503), 
SUBA_METRA  (E9F5E7)


			
			» more
			


				
	

	

		PDB
[Detailed view]		
		
			102 PDB
			


			1AFW; 1DLU; 1DLV; 1DM3; 1M1T; 1M4S; 1M4T; 1NL7; 1OU6; 1PXT; 1QFL; 1WDK; 
			
				1WDL; 1WDM; 2C7Y; 2C7Z; 2D3T; 2F2S; 2IB7; 2IB8; 2IB9; 2IBU; 2IBW; 2IBY; 
				2IIK; 2VU0; 2VU1; 2VU2; 2WKT; 2WKU; 2WKV; 2WL4; 2WL5; 2WL6; 2WU9; 3GOA; 
				4B3H; 4B3I; 4B3J; 4C2J; 4C2K; 4DD5; 4NZS; 4O99; 4W61; 4WYR; 4WYS; 4XL2; 
				5F0V; 5F38; 5LP7; 5XZ5; 5ZQZ; 5ZRV; 6AQP; 6ARE; 6ARF; 6ARG; 6ARL; 6ARR; 
				6ART; 6DV2; 6L2C; 6L2G; 7LBZ; 7LCA; 7LCL; 7LD2; 7LDC; 7LDT; 7LDU; 7LDV; 
				7LDW; 7O1I; 7O1L; 7O4Q; 7O4R; 7O4S; 7O4T; 7O4V; 8BNR; 8BNU; 8BRJ; 8GQH; 
				8GQJ; 8OPU; 8OPV; 8OPW; 8OPX; 8OPY; 8OQL; 8OQM; 8OQN; 8OQO; 8OQP; 8OQQ; 
				8OQR; 8OQS; 8OQT; 8OQU; 8OQV; 8PF8
			
			

			» more