PROSITE entry PS00121
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General information about the entry
| Entry name [info] | COLIPASE_1 |
| Accession [info] | PS00121 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-APR-1990 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00111 |
Name and characterization of the entry
| Description [info] | Colipase signature. |
| Pattern [info] |
Y-x(2)-Y-Y-x-C-x-C. |
Numerical results [info]
| Total number of hits | 14 in 14 different sequences |
| Number of true positive hits | 12 in 12 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 2 in 2 different sequences |
| Number of false negative sequences | 4 |
| Number of 'partial' sequences | 2 |
| Precision (true positives / (true positives + false positives)) | 85.71 % |
| Recall (true positives / (true positives + false negatives)) | 75.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Site [info] | interfacial_binding at position 1 |
| Site [info] | interfacial_binding at position 3 |
| Site [info] | interfacial_binding at position 4 |
| Site [info] | disulfide at position 6 |
| Site [info] | disulfide at position 8 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
12 sequences
COLA_HORSE (P02704), COLB_HORSE (P02705), COL_BOVIN (A0JNQ7), COL_CANLF (P19090), COL_HUMAN (P04118), COL_ICTTR (Q91XL7), COL_MOUSE (Q9CQC2), COL_MYOCO (P42889), COL_PIG (P02703), COL_RABIT (P42890), COL_RAT (P17084), COL_XENTR (A9JSD6)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
4 sequences
COLL1_HUMAN (A2RUU4), COLL2_HUMAN (Q6UWE3), COLL2_MOUSE (Q3UW21), COLL2_RAT (D3ZVN1)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
COL_CHICK (P11148), COL_SQUAC (P11149) |
| UniProtKB/Swiss-Prot False positive sequences |
2 sequences
PGA15_CANAL (Q5A1E1), YLOH_SCHPO (Q9URY3) |
| PDB [Detailed view] |
6 PDB
1ETH; 1LPA; 1LPB; 1N8S; 1PCN; 1PCO |