PROSITE entry PS00129

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General information about the entry

Entry name [info]	GLYCOSYL_HYDROL_F31_1
Accession [info]	PS00129
Entry type [info]	PATTERN
Date [info]	01-APR-1990 CREATED; 01-DEC-2004 DATA UPDATE; 03-MAY-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00120
Associated ProRule [info]	PRU10066

Name and characterization of the entry

Description [info]	Glycosyl hydrolases family 31 active site.
Pattern [info]	[GFY]-[LIVMF]-W-x-D-M-[NSA]-E.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_02 which contains 569'516 sequence entries.

Total number of hits	52 in 46 different sequences
Number of true positive hits	52 in 46 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	14
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	78.79 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	3
Site [info]	active_site at position 5
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

46 sequences

AGDC_ASPCL  (A1CNK4    ), AGDC_ASPFC  (B0XNL6    ), AGDC_ASPFN  (B8MZ41    ),

AGDC_ASPFU  (Q4WRH9    ), AGDC_ASPOR  (Q2UQV7    ), AGDC_ASPTN  (Q0CMA7    ), 
AGDC_NEOFI  (A1D1E6    ), AGL2_BACTQ  (Q9F234    ), AGLU_ASPNG  (P56526    ), 
AGLU_ASPOR  (Q12558    ), AGLU_BETVU  (O04931    ), AGLU_CANTS  (P29064    ), 
AGLU_HORVU  (Q43763    ), AGLU_MUCJA  (Q92442    ), AGLU_ORYSJ  (Q653V7    ), 
AGLU_SACS2  (P0CD66    ), AGLU_SACS9  (D0KQM8    ), AGLU_SCHPO  (Q9C0Y4    ), 
AGLU_SPIOL  (O04893    ), AGLU_TETPY  (O00906    ), AMYG_CANAL  (O74254    ), 
AMYG_SCHOC  (P22861    ), GANAB_DICDI (Q94502    ), GANAB_HUMAN (Q14697    ), 
GANAB_MACFA (Q4R4N7    ), GANAB_MOUSE (Q8BHN3    ), GANAB_PIG   (P79403    ), 
GANC_HUMAN  (Q8TET4    ), GANC_MACFA  (Q9BE70    ), GANC_MOUSE  (Q8BVW0    ), 
GLU2A_ORYSJ (B9F676    ), GLU2A_YEAST (P38138    ), LYAG_BOVIN  (Q9MYM4    ), 
LYAG_HUMAN  (P10253    ), LYAG_MOUSE  (P70699    ), LYAG_PONAB  (Q5R7A9    ), 
LYAG_RAT    (Q6P7A9    ), MGAL_HUMAN  (Q2M2H8    ), MGA_HUMAN   (O43451    ), 
SUIS_HUMAN  (P14410    ), SUIS_RABIT  (P07768    ), SUIS_RAT    (P23739    ), 
SUIS_SUNMU  (O62653    ), XYL1_ARATH  (Q9S7Y7    ), XYL2_ARATH  (F4J6T7    ), 
YFZB_SCHPO  (Q9URX4    )

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

14 sequences

AGDC_EMENI  (Q5AWI5    ), AIMA_KRIFD  (D2PPM7    ), GH31A_BACO1 (A7LXT0    ),

GLU2A_SCHPO (Q9US55    ), MYORG_HUMAN (Q6NSJ0    ), MYORG_MOUSE (Q69ZQ1    ), 
OL4AG_CELJU (B3PEE6    ), PSL5_ARATH  (Q9FN05    ), SP15_TETCF  (P19965    ), 
SQASE_ECOLI (P32138    ), XYLS_ECOLI  (P31434    ), XYLS_SACS2  (Q9P999    ), 
YAJ1_SCHPO  (Q09901    ), YCR2_PSEVU  (Q01336    )

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PDB
[Detailed view]

42 PDB

2G3M; 2G3N; 2QLY; 2QMJ; 3CTT; 3L4T; 3L4U; 3L4V; 3L4W; 3L4X; 3L4Y; 3L4Z; 3LPO; 3LPP; 3TON; 3TOP; 5F0E; 5H9O; 5HJO; 5HJR; 5IED; 5IEE; 5IEF; 5IEG; 5KZW; 5KZX; 5NN3; 5NN4; 5NN5; 5NN6; 5NN8; 7JTY; 7KAD; 7KB6; 7KB8; 7KBJ; 7KBR; 7KRY; 7L9E; 7P2Z; 7P32; 8D43
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