PROSITE entry PS00129

View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission

General information about the entry

Entry name [info]	GLYCOSYL_HYDROL_F31_1
Accession [info]	PS00129
Entry type [info]	PATTERN
Date [info]	01-APR-1990 CREATED; 01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00120
Associated ProRule [info]	PRU10066

Name and characterization of the entry

Description [info]	Glycosyl hydrolases family 31 active site.
Pattern [info]	[GFY]-[LIVMF]-W-x-D-M-[NSA]-E.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_06 which contains 572'619 sequence entries.

Total number of hits	52 in 46 different sequences
Number of true positive hits	52 in 46 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	17
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	75.36 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	3
Site [info]	active_site at position 5
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

46 sequences

AGDC_ASPCL  (A1CNK4), AGDC_ASPFC  (B0XNL6), AGDC_ASPFN  (B8MZ41),

AGDC_ASPFU  (Q4WRH9), AGDC_ASPOR  (Q2UQV7), AGDC_ASPTN  (Q0CMA7), 
AGDC_NEOFI  (A1D1E6), AGL2_BACTQ  (Q9F234), AGLU_ASPNG  (P56526), 
AGLU_ASPOR  (Q12558), AGLU_BETVU  (O04931), AGLU_CANTS  (P29064), 
AGLU_HORVU  (Q43763), AGLU_MUCJA  (Q92442), AGLU_ORYSJ  (Q653V7), 
AGLU_SACS2  (P0CD66), AGLU_SACS9  (D0KQM8), AGLU_SCHPO  (Q9C0Y4), 
AGLU_SPIOL  (O04893), AGLU_TETPY  (O00906), AMYG_CANAL  (O74254), 
AMYG_SCHOC  (P22861), GANAB_DICDI (Q94502), GANAB_HUMAN (Q14697), 
GANAB_MACFA (Q4R4N7), GANAB_MOUSE (Q8BHN3), GANAB_PIG   (P79403), 
GANC_HUMAN  (Q8TET4), GANC_MACFA  (Q9BE70), GANC_MOUSE  (Q8BVW0), 
GLU2A_ORYSJ (B9F676), GLU2A_YEAST (P38138), LYAG_BOVIN  (Q9MYM4), 
LYAG_HUMAN  (P10253), LYAG_MOUSE  (P70699), LYAG_PONAB  (Q5R7A9), 
LYAG_RAT(Q6P7A9), MGAL_HUMAN  (Q2M2H8), MGA_HUMAN   (O43451), 
SUIS_HUMAN  (P14410), SUIS_RABIT  (P07768), SUIS_RAT(P23739), 
SUIS_SUNMU  (O62653), XYL1_ARATH  (Q9S7Y7), XYL2_ARATH  (F4J6T7), 
YFZB_SCHPO  (Q9URX4)

» more

Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

17 sequences

AGDC_EMENI  (Q5AWI5), AIMA_KRIFD  (D2PPM7), CTSY_SPOGL  (Q8RQV0),

CTSZ_SPOGL  (Q8RQU9), GH31A_BACO1 (A7LXT0), GLU2A_SCHPO (Q9US55), 
MYORG_HUMAN (Q6NSJ0), MYORG_MOUSE (Q69ZQ1), OL4AG_CELJU (B3PEE6), 
PSL5_ARATH  (Q9FN05), SP15_TETCF  (P19965), SQASE_AGRFC (A9CEZ0), 
SQASE_ECOLI (P32138), XYLS_ECOLI  (P31434), XYLS_SACS2  (Q9P999), 
YAJ1_SCHPO  (Q09901), YCR2_PSEVU  (Q01336)

» more

PDB
[Detailed view]

43 PDB

2G3M; 2G3N; 2QLY; 2QMJ; 3CTT; 3L4T; 3L4U; 3L4V; 3L4W; 3L4X; 3L4Y; 3L4Z; 3LPO; 3LPP; 3TON; 3TOP; 5F0E; 5H9O; 5HJO; 5HJR; 5IED; 5IEE; 5IEF; 5IEG; 5KZW; 5KZX; 5NN3; 5NN4; 5NN5; 5NN6; 5NN8; 7JTY; 7KAD; 7KB6; 7KB8; 7KBJ; 7KBR; 7KRY; 7L9E; 7P2Z; 7P32; 8D43; 8EMR
» more