PROSITE entry PS00129

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General information about the entry

Entry name [info]	GLYCOSYL_HYDROL_F31_1
Accession [info]	PS00129
Entry type [info]	PATTERN
Date [info]	01-APR-1990 CREATED; 01-DEC-2004 DATA UPDATE; 08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00120
Associated ProRule [info]	PRU10066

Name and characterization of the entry

Description [info]	Glycosyl hydrolases family 31 active site.
Pattern [info]	[GFY]-[LIVMF]-W-x-D-M-[NSA]-E.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.

Total number of hits	52 in 46 different sequences
Number of true positive hits	52 in 46 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	15
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	77.61 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	3
Site [info]	active_site at position 5
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

46 sequences

AGDC_ASPCL  (A1CNK4), AGDC_ASPFC  (B0XNL6), AGDC_ASPFN  (B8MZ41),

AGDC_ASPFU  (Q4WRH9), AGDC_ASPOR  (Q2UQV7), AGDC_ASPTN  (Q0CMA7), 
AGDC_NEOFI  (A1D1E6), AGL2_BACTQ  (Q9F234), AGLU_ASPNG  (P56526), 
AGLU_ASPOR  (Q12558), AGLU_BETVU  (O04931), AGLU_CANTS  (P29064), 
AGLU_HORVU  (Q43763), AGLU_MUCJA  (Q92442), AGLU_ORYSJ  (Q653V7), 
AGLU_SACS2  (P0CD66), AGLU_SACS9  (D0KQM8), AGLU_SCHPO  (Q9C0Y4), 
AGLU_SPIOL  (O04893), AGLU_TETPY  (O00906), AMYG_CANAL  (O74254), 
AMYG_SCHOC  (P22861), GANAB_DICDI (Q94502), GANAB_HUMAN (Q14697), 
GANAB_MACFA (Q4R4N7), GANAB_MOUSE (Q8BHN3), GANAB_PIG   (P79403), 
GANC_HUMAN  (Q8TET4), GANC_MACFA  (Q9BE70), GANC_MOUSE  (Q8BVW0), 
GLU2A_ORYSJ (B9F676), GLU2A_YEAST (P38138), LYAG_BOVIN  (Q9MYM4), 
LYAG_HUMAN  (P10253), LYAG_MOUSE  (P70699), LYAG_PONAB  (Q5R7A9), 
LYAG_RAT(Q6P7A9), MGAL_HUMAN  (Q2M2H8), MGA_HUMAN   (O43451), 
SUIS_HUMAN  (P14410), SUIS_RABIT  (P07768), SUIS_RAT(P23739), 
SUIS_SUNMU  (O62653), XYL1_ARATH  (Q9S7Y7), XYL2_ARATH  (F4J6T7), 
YFZB_SCHPO  (Q9URX4)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

15 sequences

AGDC_EMENI  (Q5AWI5), AIMA_KRIFD  (D2PPM7), GH31A_BACO1 (A7LXT0),

GLU2A_SCHPO (Q9US55), MYORG_HUMAN (Q6NSJ0), MYORG_MOUSE (Q69ZQ1), 
OL4AG_CELJU (B3PEE6), PSL5_ARATH  (Q9FN05), SP15_TETCF  (P19965), 
SQASE_AGRFC (A9CEZ0), SQASE_ECOLI (P32138), XYLS_ECOLI  (P31434), 
XYLS_SACS2  (Q9P999), YAJ1_SCHPO  (Q09901), YCR2_PSEVU  (Q01336)

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PDB
[Detailed view]

43 PDB

2G3M; 2G3N; 2QLY; 2QMJ; 3CTT; 3L4T; 3L4U; 3L4V; 3L4W; 3L4X; 3L4Y; 3L4Z; 3LPO; 3LPP; 3TON; 3TOP; 5F0E; 5H9O; 5HJO; 5HJR; 5IED; 5IEE; 5IEF; 5IEG; 5KZW; 5KZX; 5NN3; 5NN4; 5NN5; 5NN6; 5NN8; 7JTY; 7KAD; 7KB6; 7KB8; 7KBJ; 7KBR; 7KRY; 7L9E; 7P2Z; 7P32; 8D43; 8EMR
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