 |
|
| Entry: PS00130 |
General information about the entry
| Entry name [info] | U_DNA_GLYCOSYLASE |
| Accession [info] | PS00130 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE; 07-OCT-2020 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00121 |
| Associated ProRule [info] | PRU10072 |
Name and characterization of the entry
| Description [info] | Uracil-DNA glycosylase signature. |
| Pattern [info] |
[KR]-[LIVA]-[LIVC]-[LIVM]-x-G-[QI]-D-P-Y. |
Numerical results [info]
| Total number of hits | 416 in 416 different sequences |
| Number of true positive hits | 416 in 416 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 6 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 98.58 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses |
| Maximum number of repetitions [info] | 1 |
| Site [info] | active_site at position 8 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
416 sequences
UNG1_BACFN (Q5LA67 ), UNG1_BACFR (Q64QI5 ), UNG1_LISIN (Q92EQ0 ), UNG1_LISMF (Q723S4 ), UNG1_LISMO (Q8Y9X7 ), UNG1_STRAW (Q82MX6 ), UNG1_STRCO (Q9EX12 ), UNG2_BACFN (Q5L9D9 ), UNG2_BACFR (Q64PM3 ), UNG2_LISIN (Q92CI1 ), UNG2_LISMF (Q720K2 ), UNG2_LISMO (Q8Y7P6 ), UNG2_STRAW (Q827B3 ), UNG2_STRCO (Q9K3Z0 ), UNG_ACIAD (Q6F9Y2 ), UNG_ACIB3 (B7H3L4 ), UNG_ACIB5 (B7I526 ), UNG_ACIBC (B2HZE0 ), UNG_ACIBS (B0VMZ7 ), UNG_ACIBT (A3M500 ), UNG_ACIBY (B0VD25 ), UNG_ACTP2 (A3MZ80 ), UNG_ACTP7 (B3H0M4 ), UNG_ACTPJ (B0BTB4 ), UNG_ACTSZ (A6VLV4 ), UNG_AERHH (A0KMZ1 ), UNG_AERS4 (A4SK71 ), UNG_AGARV (C4Z8Z2 ), UNG_AGRFC (Q8UCM8 ), UNG_ALHV1 (O36395 ), UNG_ALIF1 (Q5E2Y8 ), UNG_ALIFM (B5FAJ7 ), UNG_ALKMQ (A6TVW5 ), UNG_ALKOO (A8MM35 ), UNG_AMOA5 (B3ERG6 ), UNG_ANOFW (B7GMM1 ), UNG_ARCB4 (A8EWN8 ), UNG_AZOPC (B6YR15 ), UNG_AZOVD (C1DQR0 ), UNG_BACAA (C3P2F8 ), UNG_BACAC (C3LFS7 ), UNG_BACAH (A0RLI1 ), UNG_BACAN (Q81JQ4 ), UNG_BACC0 (B7JHM3 ), UNG_BACC1 (Q72X51 ), UNG_BACC2 (B7IRS8 ), UNG_BACC3 (C1EQ68 ), UNG_BACC4 (B7HG60 ), UNG_BACC7 (B7HYF9 ), UNG_BACCN (A7GVE5 ), UNG_BACCQ (B9IS32 ), UNG_BACCR (Q814M9 ), UNG_BACCZ (Q630K2 ), UNG_BACHD (Q9K682 ), UNG_BACHK (Q6HAN7 ), UNG_BACLD (Q65DN9 ), UNG_BACMK (A9VSJ0 ), UNG_BACP2 (A8FIM7 ), UNG_BACSK (Q5WAZ9 ), UNG_BACSU (P39615 ), UNG_BACTN (Q8A5V6 ), UNG_BACV8 (A6L7T5 ), UNG_BACVZ (A7ZA24 ), UNG_BHV1C (P53764 ), UNG_BIFLO (Q8G3E9 ), UNG_BLOFL (Q7VRQ7 ), UNG_BORA1 (Q2L0Y2 ), UNG_BORAP (Q0SPB2 ), UNG_BORBP (Q662W1 ), UNG_BORBR (Q7WQW5 ), UNG_BORBU (O51082 ), UNG_BORBZ (B7J0Y9 ), UNG_BORDL (B5RKV2 ), UNG_BORHD (B2S1N8 ), UNG_BORPA (Q7W1Y7 ), UNG_BORPD (A9IGW1 ), UNG_BORPE (Q7VUM8 ), UNG_BORRA (B5RQN2 ), UNG_BORT9 (A1QYK3 ), UNG_BREBN (C0Z887 ), UNG_BUCAI (P57280 ), UNG_BUCAT (B8D787 ), UNG_BUCBP (P59465 ), UNG_BUCCC (Q057V4 ), UNG_CAMC1 (A7ZAZ4 ), UNG_CAMC5 (A7GVX1 ), UNG_CAMFF (A0RM89 ), UNG_CAMHC (A7I0A8 ), UNG_CAMJ8 (A8FJP1 ), UNG_CAMJD (A7H1G3 ), UNG_CAMJE (Q9PJ40 ), UNG_CAMJJ (A1VXG9 ), UNG_CAMJR (Q5HX80 ), UNG_CAMLR (B9KEK7 ), UNG_CHLAB (Q5L4Q4 ), UNG_CHLCV (Q821F7 ), UNG_CHLFF (Q256I7 ), UNG_CHLMU (Q9PJD2 ), UNG_CHLPN (Q9Z7D3 ), UNG_CHLT2 (B0B8I2 ), UNG_CHLTA (Q3KL88 ), UNG_CHLTB (B0BA61 ), UNG_CHLTR (O84613 ), UNG_CHRVO (Q7P1I1 ), UNG_CITK8 (A8AD07 ), UNG_CLOB8 (A6M317 ), UNG_CLOBA (B2V017 ), UNG_CLOBB (B2TQZ9 ), UNG_CLOD6 (Q182G9 ), UNG_CLOP1 (Q0TUH0 ), UNG_CLOPE (Q8XNR7 ), UNG_CLOPS (Q0SWB8 ), UNG_COREF (Q8FPQ4 ), UNG_CORGL (Q8NQU9 ), UNG_COXB1 (B6J738 ), UNG_COXB2 (B6J089 ), UNG_COXBN (A9KCD5 ), UNG_COXBU (Q83CW4 ), UNG_DEIGD (Q1IWN1 ), UNG_DEIRA (Q9RWH9 ), UNG_DESAG (Q315T1 ), UNG_DESHD (B8FSV8 ), UNG_DESHY (Q24YA3 ), UNG_DICDI (P53766 ), UNG_DICNV (A5EVB8 ), UNG_EBVB9 (P12888 ), UNG_ECO24 (A7ZQ25 ), UNG_ECO27 (B7UH19 ), UNG_ECO45 (B7MIR5 ), UNG_ECO55 (B7LDH3 ), UNG_ECO57 (Q8X444 ), UNG_ECO5E (B5Z154 ), UNG_ECO7I (B7NRN6 ), UNG_ECO81 (B7MYL3 ), UNG_ECO8A (B7M8J5 ), UNG_ECOBW (C4ZYK3 ), UNG_ECODH (B1XBQ7 ), UNG_ECOHS (A8A392 ), UNG_ECOK1 (A1AEB0 ), UNG_ECOL5 (Q0TEQ8 ), UNG_ECOL6 (Q8FF08 ), UNG_ECOLC (B1IVP7 ), UNG_ECOLI (P12295 ), UNG_ECOLU (B7N6H1 ), UNG_ECOSE (B6I5F5 ), UNG_ECOSM (B1LP93 ), UNG_ECOUT (Q1R8F2 ), UNG_EHV1B (P28866 ), UNG_EHV1V (P69859 ), UNG_EHV2 (P53765 ), UNG_ENT38 (A4WDE9 ), UNG_ENTFA (Q836Z5 ), UNG_ERWT9 (B2VEC7 ), UNG_ESCF3 (B7LUY5 ), UNG_FLAJ1 (A5FFT1 ), UNG_FOWPN (P21968 ), UNG_FRAP2 (B0TXF5 ), UNG_FRASN (A8LD98 ), UNG_FRAT1 (Q14G45 ), UNG_FRATF (A7NAN4 ), UNG_FRATH (Q2A4Q4 ), UNG_FRATM (B2SFW5 ), UNG_FRATN (A0Q7Y8 ), UNG_FRATO (Q0BN28 ), UNG_FRATT (Q5NEP2 ), UNG_FRATW (A4IWI7 ), UNG_FUSNN (Q8R634 ), UNG_GAHVM (Q9E6R2 ), UNG_GEOKA (Q5KUD0 ), UNG_GEOSW (C5D9T3 ), UNG_GEOTN (A4ITQ2 ), UNG_GRAFK (A0M1V1 ), UNG_HAEDU (Q7VMC0 ), UNG_HAEI8 (Q4QPM6 ), UNG_HAEIE (A5UBC0 ), UNG_HAEIN (P43731 ), UNG_HAEPS (B8F6C3 ), UNG_HAES1 (Q0I271 ), UNG_HCMVA (P16769 ), UNG_HCMVM (F5HI85 ), UNG_HELAH (Q17Z05 ), UNG_HELHP (Q7VGS1 ), UNG_HELP2 (B6JNI4 ), UNG_HELPG (B5Z8Z4 ), UNG_HELPH (Q1CRR1 ), UNG_HELPJ (Q9ZJN9 ), UNG_HELPS (B2UVB0 ), UNG_HELPY (P56397 ), UNG_HHV11 (P10186 ), UNG_HHV23 (P13158 ), UNG_HHV2H (P28275 ), UNG_HHV6U (P52345 ), UNG_HHV6Z (P52447 ), UNG_HHV7J (P50639 ), UNG_HHV8P (F5HFA1 ), UNG_HISS2 (B0UWA7 ), UNG_HUMAN (P13051 ), UNG_IDILO (Q5R080 ), UNG_KLEP3 (B5XNF8 ), UNG_KLEP7 (A6TCJ2 ), UNG_LACAC (Q5FL46 ), UNG_LACBA (Q03SK6 ), UNG_LACCB (B3WCZ5 ), UNG_LACDA (Q1GB22 ), UNG_LACDB (Q04BG7 ), UNG_LACF3 (B2GAM7 ), UNG_LACH4 (A8YUE7 ), UNG_LACJO (Q74K70 ), UNG_LACLA (Q9CIX2 ), UNG_LACLM (A2RHW2 ), UNG_LACLS (Q032L5 ), UNG_LACP3 (Q03AI1 ), UNG_LACP7 (A9KP29 ), UNG_LACPL (Q88YG1 ), UNG_LACRD (A5VIJ2 ), UNG_LACRJ (B2G626 ), UNG_LACSS (Q38VY5 ), UNG_LEUCK (B1MXY4 ), UNG_LEUMM (Q03W63 ), UNG_LYSSC (B1I012 ), UNG_MACCJ (B9E8N2 ), UNG_MANSM (Q65VN0 ), UNG_MIMIV (Q5UPT2 ), UNG_MOUSE (P97931 ), UNG_MYCA1 (A0QJA9 ), UNG_MYCA9 (B1MDP0 ), UNG_MYCBO (P67072 ), UNG_MYCBP (A1KMX0 ), UNG_MYCBT (C1AG91 ), UNG_MYCGE (P47343 ), UNG_MYCGI (A4TE31 ), UNG_MYCH7 (Q4A8N4 ), UNG_MYCLB (B8ZS02 ), UNG_MYCLE (Q9CBS3 ), UNG_MYCMM (B2HIJ2 ), UNG_MYCPA (Q73VJ7 ), UNG_MYCPN (P75536 ), UNG_MYCPU (Q98PV4 ), UNG_MYCS2 (A0QV01 ), UNG_MYCSJ (A3PXS4 ), UNG_MYCSK (A1UEC0 ), UNG_MYCSS (Q1BAP2 ), UNG_MYCTA (A5U6Y7 ), UNG_MYCTO (P9WFQ8 ), UNG_MYCTU (P9WFQ9 ), UNG_MYCUA (A0PQ07 ), UNG_MYCVP (A1T717 ), UNG_NEIG1 (Q5F8I7 ), UNG_NEIG2 (B4RLL6 ), UNG_NEIM0 (A9LZA2 ), UNG_NEIMA (Q9JUC4 ), UNG_NEIMB (Q9JZA1 ), UNG_NEIMF (A1KU26 ), UNG_NOCFA (Q5YRZ2 ), UNG_NOCSJ (A1SNW4 ), UNG_OCEIH (Q8EPH6 ), UNG_PASMU (P57807 ), UNG_PECAS (Q6D208 ), UNG_PECCP (C6DC11 ), UNG_PEDPA (Q03GV8 ), UNG_PHOLL (Q7N1U8 ), UNG_PORG3 (B2RHL6 ), UNG_PORGI (Q7MXF6 ), UNG_PSE14 (Q48ET5 ), UNG_PSEA7 (A6VAM7 ), UNG_PSEA8 (B7UYZ2 ), UNG_PSEAB (Q02HQ1 ), UNG_PSEAE (Q9I5H9 ), UNG_PSEE4 (Q1I5T6 ), UNG_PSEF5 (Q4KGS0 ), UNG_PSEFS (C3KDS6 ), UNG_PSEHT (Q3IG47 ), UNG_PSEP1 (A5W8H2 ), UNG_PSEPF (Q3KGL4 ), UNG_PSEPG (B0KV50 ), UNG_PSEPK (Q88N05 ), UNG_PSEPW (B1J4J3 ), UNG_PSESM (Q87XE2 ), UNG_PSEU2 (Q4ZPC2 ), UNG_PSHV1 (Q6UDG6 ), UNG_PSYIN (A1SUE5 ), UNG_RALPJ (B2UDL1 ), UNG_RALSO (Q8XVE4 ), UNG_RFVKA (P32941 ), UNG_RHIME (Q92LU5 ), UNG_RHOFT (Q21SE9 ), UNG_RUEST (Q1GHJ4 ), UNG_SALA4 (B5F228 ), UNG_SALAR (A9MGV9 ), UNG_SALCH (Q57L54 ), UNG_SALDC (B5FRD9 ), UNG_SALEP (B5QTW1 ), UNG_SALG2 (B5RD62 ), UNG_SALHS (B4TE28 ), UNG_SALNS (B4T290 ), UNG_SALPA (Q5PLH8 ), UNG_SALPB (A9N0W3 ), UNG_SALPC (C0PVZ2 ), UNG_SALPK (B5BAR7 ), UNG_SALSV (B4TS29 ), UNG_SALTI (P67074 ), UNG_SALTY (P67073 ), UNG_SCHPO (O74834 ), UNG_SERP5 (A8GI39 ), UNG_SHEFN (Q07YI6 ), UNG_SHEON (Q8EB78 ), UNG_SHIB3 (B2TYK1 ), UNG_SHIBS (Q31XQ4 ), UNG_SHIDS (Q32CT9 ), UNG_SHIF8 (Q0T1S6 ), UNG_SHISS (Q3YYT5 ), UNG_SHV21 (Q01019 ), UNG_SINMW (A6UDC0 ), UNG_SINSX (P29950 ), UNG_SODGM (Q2NS03 ), UNG_STAA1 (A7WZ22 ), UNG_STAA2 (A6TZ58 ), UNG_STAA3 (Q2FJ62 ), UNG_STAA8 (Q2G0J7 ), UNG_STAA9 (A5IQD5 ), UNG_STAAB (Q2YS83 ), UNG_STAAC (Q5HI95 ), UNG_STAAE (A6QEN4 ), UNG_STAAM (P67075 ), UNG_STAAN (P67076 ), UNG_STAAR (Q6GJ88 ), UNG_STAAS (Q6GBQ6 ), UNG_STAAT (A8YZS8 ), UNG_STAAW (P67077 ), UNG_STACT (B9DKT3 ), UNG_STAEQ (Q5HRG5 ), UNG_STAES (Q8CQ65 ), UNG_STAHJ (Q4L3Q7 ), UNG_STAS1 (Q49VD1 ), UNG_STRA1 (P0A4P5 ), UNG_STRA3 (P0A4P3 ), UNG_STRA5 (P0A4P4 ), UNG_STRE4 (C0M7J9 ), UNG_STREM (B4U3D4 ), UNG_STRGC (A8AXM4 ), UNG_STRMU (Q8DTV8 ), UNG_STRP1 (Q9A072 ), UNG_STRP2 (Q04KE2 ), UNG_STRP3 (P0DG74 ), UNG_STRP4 (B5E4R3 ), UNG_STRP6 (Q5XCK3 ), UNG_STRP8 (Q8P1B6 ), UNG_STRPB (Q1JC76 ), UNG_STRPC (Q1JM60 ), UNG_STRPD (Q1JHA5 ), UNG_STRPF (Q1J724 ), UNG_STRPG (A2RF00 ), UNG_STRPI (B1IBW9 ), UNG_STRPJ (B8ZQ48 ), UNG_STRPM (Q48U05 ), UNG_STRPN (P23379 ), UNG_STRPQ (P0DG75 ), UNG_STRPZ (B5XL20 ), UNG_STRR6 (Q8DPQ4 ), UNG_STRS2 (A4W1D5 ), UNG_STRS7 (C0ME57 ), UNG_STRSV (A3CN85 ), UNG_STRSY (A4VV30 ), UNG_STRTD (Q03KM6 ), UNG_STRU0 (B9DSB9 ), UNG_STRZJ (C1CED4 ), UNG_STRZP (C1CKR8 ), UNG_STRZT (C1CRP5 ), UNG_SUHVF (P52506 ), UNG_SUHVK (P52507 ), UNG_SULDN (Q30Q92 ), UNG_THEFY (Q47Q90 ), UNG_TOLAT (C4LC44 ), UNG_TROW8 (P67079 ), UNG_TROWT (P67078 ), UNG_UREP2 (B1AJI8 ), UNG_UREPA (Q9PPU2 ), UNG_UREU1 (B5ZC55 ), UNG_VACCA (Q91UM2 ), UNG_VACCC (P20536 ), UNG_VACCW (P04303 ), UNG_VAR67 (P0DSP7 ), UNG_VARV (P0DSP8 ), UNG_VIBC3 (A5F5R5 ), UNG_VIBCB (A7MS85 ), UNG_VIBCH (Q9KPK8 ), UNG_VIBCM (C3LQD1 ), UNG_VIBPA (Q87SC4 ), UNG_VIBVU (Q8DEP7 ), UNG_VIBVY (Q7MNR0 ), UNG_VZVD (P09307 ), UNG_VZVO (Q9J3N2 ), UNG_WOLSU (Q7MA00 ), UNG_XANAC (Q8PFZ6 ), UNG_XANC5 (Q3BNI2 ), UNG_XANC8 (Q4UPY9 ), UNG_XANCB (B0RWT2 ), UNG_XANCP (Q8P4D7 ), UNG_XANOM (Q2NY21 ), UNG_XANOP (B2SJF5 ), UNG_XANOR (Q5GUS2 ), UNG_XYLF2 (B2IAB2 ), UNG_XYLFA (Q9PA28 ), UNG_XYLFM (B0U620 ), UNG_XYLFT (Q879Z0 ), UNG_YEAST (P12887 ), UNG_YERE8 (A1JKI8 ), UNG_YERP3 (A7FFS4 ), UNG_YERPA (Q1C570 ), UNG_YERPB (B2KA63 ), UNG_YERPE (Q8ZD85 ), UNG_YERPG (A9R3Y6 ), UNG_YERPN (Q1CKF8 ), UNG_YERPP (A4TKZ2 ), UNG_YERPS (Q667T7 ), UNG_YERPY (B1JRB1 )» more
|
| UniProtKB/Swiss-Prot False negative sequences |
6 sequences
UNG_ALISL (B6EKY3 ), UNG_ARATH (Q9LIH6 ), UNG_CAEEL (Q9U221 ), UNG_DEIDV (C1CXS7 ), UNG_EXIS2 (B1YFL0 ), UNG_PROMH (B4F058 )» more |
| PDB [Detailed view] |
91 PDB
1AKZ; 1EMH; 1EMJ; 1EUG; 1EUI; 1FLZ; 1LAU; 1LQG; 1LQJ; 1LQM; 1Q3F; 1SSP; 1UDG; 1UDH; 1UDI; 1UGH; 1UUG; 1YUO; 2BOO; 2EUG; 2HXM; 2J8X; 2JHQ; 2OWQ; 2OXM; 2OYT; 2SSP; 2UUG; 2ZHX; 3A7N; 3EUG; 3FCF; 3FCI; 3FCK; 3FCL; 3NT7; 3TKB; 3TR7; 3UF7; 3UFM; 3WDF; 3WDG; 3ZOQ; 3ZOR; 4DOF; 4DOG; 4EUG; 4IRB; 4L5N; 4LZB; 4OD8; 4ODA; 4QC9; 4QCA; 4QCB; 4UQM; 4WPK; 4WPL; 4WRU; 4WRV; 4WRW; 4WRX; 4WRY; 4WRZ; 4WS0; 4WS1; 4WS2; 4WS3; 4WS4; 4WS5; 4WS6; 4WS7; 4WS8; 4YGM; 4YIG; 5AYR; 5AYS; 5EUG; 5JK7; 5JKR; 5JKS; 5JKT; 5JX0; 5JX3; 5JX8; 5NN7; 5NNH; 5NNU; 5X55; 6LYD; 6LYE » more |
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission