PROSITE entry PS00130
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General information about the entry
| Entry name [info] | U_DNA_GLYCOSYLASE |
| Accession [info] | PS00130 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00121 |
| Associated ProRule [info] | PRU10072 |
Name and characterization of the entry
| Description [info] | Uracil-DNA glycosylase signature. |
| Pattern [info] |
[KR]-[LIVA]-[LIVC]-[LIVM]-x-G-[QI]-D-P-Y. |
Numerical results [info]
| Total number of hits | 417 in 417 different sequences |
| Number of true positive hits | 417 in 417 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 6 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 98.58 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses |
| Maximum number of repetitions [info] | 1 |
| Site [info] | active_site at position 8 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
417 sequences
UNG1_BACFN (Q5LA67), UNG1_BACFR (Q64QI5), UNG1_LISIN (Q92EQ0), UNG1_LISMF (Q723S4), UNG1_LISMO (Q8Y9X7), UNG1_STRAW (Q82MX6), UNG1_STRCO (Q9EX12), UNG2_BACFN (Q5L9D9), UNG2_BACFR (Q64PM3), UNG2_LISIN (Q92CI1), UNG2_LISMF (Q720K2), UNG2_LISMO (Q8Y7P6), UNG2_STRAW (Q827B3), UNG2_STRCO (Q9K3Z0), UNG_ACIAD (Q6F9Y2), UNG_ACIB3 (B7H3L4), UNG_ACIB5 (B7I526), UNG_ACIBC (B2HZE0), UNG_ACIBS (B0VMZ7), UNG_ACIBT (A3M500), UNG_ACIBY (B0VD25), UNG_ACTP2 (A3MZ80), UNG_ACTP7 (B3H0M4), UNG_ACTPJ (B0BTB4), UNG_ACTSZ (A6VLV4), UNG_AERHH (A0KMZ1), UNG_AERS4 (A4SK71), UNG_AGARV (C4Z8Z2), UNG_AGRFC (Q8UCM8), UNG_ALBFT (Q21SE9), UNG_ALHV1 (O36395), UNG_ALIB4 (A8EWN8), UNG_ALIF1 (Q5E2Y8), UNG_ALIFM (B5FAJ7), UNG_ALKCK (Q5WAZ9), UNG_ALKMQ (A6TVW5), UNG_ALKOO (A8MM35), UNG_AMOA5 (B3ERG6), UNG_ANOFW (B7GMM1), UNG_AZOPC (B6YR15), UNG_AZOVD (C1DQR0), UNG_BACAA (C3P2F8), UNG_BACAC (C3LFS7), UNG_BACAH (A0RLI1), UNG_BACAN (Q81JQ4), UNG_BACC0 (B7JHM3), UNG_BACC1 (Q72X51), UNG_BACC2 (B7IRS8), UNG_BACC3 (C1EQ68), UNG_BACC4 (B7HG60), UNG_BACC7 (B7HYF9), UNG_BACCN (A7GVE5), UNG_BACCQ (B9IS32), UNG_BACCR (Q814M9), UNG_BACCZ (Q630K2), UNG_BACHK (Q6HAN7), UNG_BACLD (Q65DN9), UNG_BACMK (A9VSJ0), UNG_BACP2 (A8FIM7), UNG_BACSU (P39615), UNG_BACTN (Q8A5V6), UNG_BACVZ (A7ZA24), UNG_BHV1C (P53764), UNG_BIFLO (Q8G3E9), UNG_BLOFL (Q7VRQ7), UNG_BORA1 (Q2L0Y2), UNG_BORAP (Q0SPB2), UNG_BORBR (Q7WQW5), UNG_BORBU (O51082), UNG_BORBZ (B7J0Y9), UNG_BORDL (B5RKV2), UNG_BORGP (Q662W1), UNG_BORHD (B2S1N8), UNG_BORPA (Q7W1Y7), UNG_BORPD (A9IGW1), UNG_BORPE (Q7VUM8), UNG_BORRA (B5RQN2), UNG_BORT9 (A1QYK3), UNG_BREBN (C0Z887), UNG_BUCAI (P57280), UNG_BUCAT (B8D787), UNG_BUCBP (P59465), UNG_BUCCC (Q057V4), UNG_CAMC1 (A7ZAZ4), UNG_CAMC5 (A7GVX1), UNG_CAMFF (A0RM89), UNG_CAMHC (A7I0A8), UNG_CAMJ8 (A8FJP1), UNG_CAMJD (A7H1G3), UNG_CAMJE (Q9PJ40), UNG_CAMJJ (A1VXG9), UNG_CAMJR (Q5HX80), UNG_CAMLR (B9KEK7), UNG_CHLAB (Q5L4Q4), UNG_CHLCV (Q821F7), UNG_CHLFF (Q256I7), UNG_CHLMU (Q9PJD2), UNG_CHLPN (Q9Z7D3), UNG_CHLT2 (B0B8I2), UNG_CHLTA (Q3KL88), UNG_CHLTB (B0BA61), UNG_CHLTR (O84613), UNG_CHRFK (A0M1V1), UNG_CHRVO (Q7P1I1), UNG_CITK8 (A8AD07), UNG_CLOB8 (A6M317), UNG_CLOBA (B2V017), UNG_CLOBB (B2TQZ9), UNG_CLOD6 (Q182G9), UNG_CLOP1 (Q0TUH0), UNG_CLOPE (Q8XNR7), UNG_CLOPS (Q0SWB8), UNG_COREF (Q8FPQ4), UNG_CORGL (Q8NQU9), UNG_COXB1 (B6J738), UNG_COXB2 (B6J089), UNG_COXBN (A9KCD5), UNG_COXBU (Q83CW4), UNG_DEIGD (Q1IWN1), UNG_DEIRA (Q9RWH9), UNG_DESHD (B8FSV8), UNG_DESHY (Q24YA3), UNG_DICDI (P53766), UNG_DICNV (A5EVB8), UNG_EBVB9 (P12888), UNG_ECO24 (A7ZQ25), UNG_ECO27 (B7UH19), UNG_ECO45 (B7MIR5), UNG_ECO55 (B7LDH3), UNG_ECO57 (Q8X444), UNG_ECO5E (B5Z154), UNG_ECO7I (B7NRN6), UNG_ECO81 (B7MYL3), UNG_ECO8A (B7M8J5), UNG_ECOBW (C4ZYK3), UNG_ECODH (B1XBQ7), UNG_ECOHS (A8A392), UNG_ECOK1 (A1AEB0), UNG_ECOL5 (Q0TEQ8), UNG_ECOL6 (Q8FF08), UNG_ECOLC (B1IVP7), UNG_ECOLI (P12295), UNG_ECOLU (B7N6H1), UNG_ECOSE (B6I5F5), UNG_ECOSM (B1LP93), UNG_ECOUT (Q1R8F2), UNG_EHV1B (P28866), UNG_EHV1V (P69859), UNG_EHV2(P53765), UNG_ENT38 (A4WDE9), UNG_ENTFA (Q836Z5), UNG_ERWT9 (B2VEC7), UNG_ESCF3 (B7LUY5), UNG_FLAJ1 (A5FFT1), UNG_FOWPN (P21968), UNG_FRAP2 (B0TXF5), UNG_FRASN (A8LD98), UNG_FRAT1 (Q14G45), UNG_FRATF (A7NAN4), UNG_FRATH (Q2A4Q4), UNG_FRATM (B2SFW5), UNG_FRATN (A0Q7Y8), UNG_FRATO (Q0BN28), UNG_FRATT (Q5NEP2), UNG_FRATW (A4IWI7), UNG_FUSNN (Q8R634), UNG_GAHVM (Q9E6R2), UNG_GEOKA (Q5KUD0), UNG_GEOSW (C5D9T3), UNG_GEOTN (A4ITQ2), UNG_GLAP5 (B8F6C3), UNG_HAEDU (Q7VMC0), UNG_HAEI8 (Q4QPM6), UNG_HAEIE (A5UBC0), UNG_HAEIN (P43731), UNG_HALH5 (Q9K682), UNG_HCMVA (P16769), UNG_HCMVM (F5HI85), UNG_HELAH (Q17Z05), UNG_HELHP (Q7VGS1), UNG_HELP2 (B6JNI4), UNG_HELPG (B5Z8Z4), UNG_HELPH (Q1CRR1), UNG_HELPJ (Q9ZJN9), UNG_HELPS (B2UVB0), UNG_HELPY (P56397), UNG_HHV11 (P10186), UNG_HHV23 (P13158), UNG_HHV2H (P28275), UNG_HHV6U (P52345), UNG_HHV6Z (P52447), UNG_HHV7J (P50639), UNG_HHV8P (F5HFA1), UNG_HISS1 (Q0I271), UNG_HISS2 (B0UWA7), UNG_HUMAN (P13051), UNG_IDILO (Q5R080), UNG_KLEP3 (B5XNF8), UNG_KLEP7 (A6TCJ2), UNG_LACAC (Q5FL46), UNG_LACCB (B3WCZ5), UNG_LACDA (Q1GB22), UNG_LACDB (Q04BG7), UNG_LACH4 (A8YUE7), UNG_LACJO (Q74K70), UNG_LACLA (Q9CIX2), UNG_LACLM (A2RHW2), UNG_LACLS (Q032L5), UNG_LACP3 (Q03AI1), UNG_LACP7 (A9KP29), UNG_LACPL (Q88YG1), UNG_LATSS (Q38VY5), UNG_LEUCK (B1MXY4), UNG_LEUMM (Q03W63), UNG_LEVBA (Q03SK6), UNG_LIMF3 (B2GAM7), UNG_LIMRD (A5VIJ2), UNG_LIMRJ (B2G626), UNG_LYSSC (B1I012), UNG_MACCJ (B9E8N2), UNG_MANSM (Q65VN0), UNG_MESH7 (Q4A8N4), UNG_MIMIV (Q5UPT2), UNG_MONPV (M1LL92), UNG_MOUSE (P97931), UNG_MYCA1 (A0QJA9), UNG_MYCA9 (B1MDP0), UNG_MYCBO (P67072), UNG_MYCBP (A1KMX0), UNG_MYCBT (C1AG91), UNG_MYCGE (P47343), UNG_MYCGI (A4TE31), UNG_MYCLB (B8ZS02), UNG_MYCLE (Q9CBS3), UNG_MYCMM (B2HIJ2), UNG_MYCPA (Q73VJ7), UNG_MYCPN (P75536), UNG_MYCPU (Q98PV4), UNG_MYCS2 (A0QV01), UNG_MYCSJ (A3PXS4), UNG_MYCSK (A1UEC0), UNG_MYCSS (Q1BAP2), UNG_MYCTA (A5U6Y7), UNG_MYCTO (P9WFQ8), UNG_MYCTU (P9WFQ9), UNG_MYCUA (A0PQ07), UNG_MYCVP (A1T717), UNG_NEIG1 (Q5F8I7), UNG_NEIG2 (B4RLL6), UNG_NEIM0 (A9LZA2), UNG_NEIMA (Q9JUC4), UNG_NEIMB (Q9JZA1), UNG_NEIMF (A1KU26), UNG_NOCFA (Q5YRZ2), UNG_NOCSJ (A1SNW4), UNG_OCEIH (Q8EPH6), UNG_OLEA2 (Q315T1), UNG_PASMU (P57807), UNG_PECAS (Q6D208), UNG_PECCP (C6DC11), UNG_PEDPA (Q03GV8), UNG_PHOLL (Q7N1U8), UNG_PHOV8 (A6L7T5), UNG_PORG3 (B2RHL6), UNG_PORGI (Q7MXF6), UNG_PSE14 (Q48ET5), UNG_PSEA7 (A6VAM7), UNG_PSEA8 (B7UYZ2), UNG_PSEAB (Q02HQ1), UNG_PSEAE (Q9I5H9), UNG_PSEE4 (Q1I5T6), UNG_PSEF5 (Q4KGS0), UNG_PSEFS (C3KDS6), UNG_PSEP1 (A5W8H2), UNG_PSEPF (Q3KGL4), UNG_PSEPG (B0KV50), UNG_PSEPK (Q88N05), UNG_PSEPW (B1J4J3), UNG_PSESM (Q87XE2), UNG_PSET1 (Q3IG47), UNG_PSEU2 (Q4ZPC2), UNG_PSHV1 (Q6UDG6), UNG_PSYIN (A1SUE5), UNG_RALN1 (Q8XVE4), UNG_RALPJ (B2UDL1), UNG_RFVKA (P32941), UNG_RHIME (Q92LU5), UNG_RUEST (Q1GHJ4), UNG_SALA4 (B5F228), UNG_SALAR (A9MGV9), UNG_SALCH (Q57L54), UNG_SALDC (B5FRD9), UNG_SALEP (B5QTW1), UNG_SALG2 (B5RD62), UNG_SALHS (B4TE28), UNG_SALNS (B4T290), UNG_SALPA (Q5PLH8), UNG_SALPB (A9N0W3), UNG_SALPC (C0PVZ2), UNG_SALPK (B5BAR7), UNG_SALSV (B4TS29), UNG_SALTI (P67074), UNG_SALTY (P67073), UNG_SCHPO (O74834), UNG_SERP5 (A8GI39), UNG_SHEFN (Q07YI6), UNG_SHEON (Q8EB78), UNG_SHIB3 (B2TYK1), UNG_SHIBS (Q31XQ4), UNG_SHIDS (Q32CT9), UNG_SHIF8 (Q0T1S6), UNG_SHISS (Q3YYT5), UNG_SHV21 (Q01019), UNG_SINMW (A6UDC0), UNG_SINSX (P29950), UNG_SODGM (Q2NS03), UNG_STAA1 (A7WZ22), UNG_STAA2 (A6TZ58), UNG_STAA3 (Q2FJ62), UNG_STAA8 (Q2G0J7), UNG_STAA9 (A5IQD5), UNG_STAAB (Q2YS83), UNG_STAAC (Q5HI95), UNG_STAAE (A6QEN4), UNG_STAAM (P67075), UNG_STAAN (P67076), UNG_STAAR (Q6GJ88), UNG_STAAS (Q6GBQ6), UNG_STAAT (A8YZS8), UNG_STAAW (P67077), UNG_STACT (B9DKT3), UNG_STAEQ (Q5HRG5), UNG_STAES (Q8CQ65), UNG_STAHJ (Q4L3Q7), UNG_STAS1 (Q49VD1), UNG_STRA1 (P0A4P5), UNG_STRA3 (P0A4P3), UNG_STRA5 (P0A4P4), UNG_STRE4 (C0M7J9), UNG_STREM (B4U3D4), UNG_STRGC (A8AXM4), UNG_STRMU (Q8DTV8), UNG_STRP1 (Q9A072), UNG_STRP2 (Q04KE2), UNG_STRP3 (P0DG74), UNG_STRP4 (B5E4R3), UNG_STRP6 (Q5XCK3), UNG_STRP8 (Q8P1B6), UNG_STRPB (Q1JC76), UNG_STRPC (Q1JM60), UNG_STRPD (Q1JHA5), UNG_STRPF (Q1J724), UNG_STRPG (A2RF00), UNG_STRPI (B1IBW9), UNG_STRPJ (B8ZQ48), UNG_STRPM (Q48U05), UNG_STRPN (P23379), UNG_STRPQ (P0DG75), UNG_STRPZ (B5XL20), UNG_STRR6 (Q8DPQ4), UNG_STRS2 (A4W1D5), UNG_STRS7 (C0ME57), UNG_STRSV (A3CN85), UNG_STRSY (A4VV30), UNG_STRTD (Q03KM6), UNG_STRU0 (B9DSB9), UNG_STRZJ (C1CED4), UNG_STRZP (C1CKR8), UNG_STRZT (C1CRP5), UNG_SUHVF (P52506), UNG_SUHVK (P52507), UNG_SULDN (Q30Q92), UNG_THEFY (Q47Q90), UNG_TOLAT (C4LC44), UNG_TROW8 (P67079), UNG_TROWT (P67078), UNG_UREP2 (B1AJI8), UNG_UREPA (Q9PPU2), UNG_UREU1 (B5ZC55), UNG_VACCA (Q91UM2), UNG_VACCC (P20536), UNG_VACCW (P04303), UNG_VAR67 (P0DSP7), UNG_VARV(P0DSP8), UNG_VIBC1 (A7MS85), UNG_VIBC3 (A5F5R5), UNG_VIBCH (Q9KPK8), UNG_VIBCM (C3LQD1), UNG_VIBPA (Q87SC4), UNG_VIBVU (Q8DEP7), UNG_VIBVY (Q7MNR0), UNG_VZVD(P09307), UNG_VZVO(Q9J3N2), UNG_WOLSU (Q7MA00), UNG_XANAC (Q8PFZ6), UNG_XANC5 (Q3BNI2), UNG_XANC8 (Q4UPY9), UNG_XANCB (B0RWT2), UNG_XANCP (Q8P4D7), UNG_XANOM (Q2NY21), UNG_XANOP (B2SJF5), UNG_XANOR (Q5GUS2), UNG_XYLF2 (B2IAB2), UNG_XYLFA (Q9PA28), UNG_XYLFM (B0U620), UNG_XYLFT (Q879Z0), UNG_YEAST (P12887), UNG_YERE8 (A1JKI8), UNG_YERP3 (A7FFS4), UNG_YERPA (Q1C570), UNG_YERPB (B2KA63), UNG_YERPE (Q8ZD85), UNG_YERPG (A9R3Y6), UNG_YERPN (Q1CKF8), UNG_YERPP (A4TKZ2), UNG_YERPS (Q667T7), UNG_YERPY (B1JRB1)» more
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| UniProtKB/Swiss-Prot False negative sequences |
6 sequences
UNG_ALISL (B6EKY3), UNG_ARATH (Q9LIH6), UNG_CAEEL (Q9U221), UNG_DEIDV (C1CXS7), UNG_EXIS2 (B1YFL0), UNG_PROMH (B4F058)» more |
| PDB [Detailed view] |
108 PDB
1AKZ; 1EMH; 1EMJ; 1EUG; 1EUI; 1FLZ; 1LAU; 1LQG; 1LQJ; 1LQM; 1Q3F; 1SSP; 1UDG; 1UDH; 1UDI; 1UGH; 1UUG; 1YUO; 2BOO; 2EUG; 2HXM; 2J8X; 2JHQ; 2OWQ; 2OXM; 2OYT; 2SSP; 2UUG; 2ZHX; 3A7N; 3EUG; 3FCF; 3FCI; 3FCK; 3FCL; 3NT7; 3TKB; 3TR7; 3UF7; 3UFM; 3WDF; 3WDG; 3ZOQ; 3ZOR; 4DOF; 4DOG; 4EUG; 4IRB; 4L5N; 4LZB; 4OD8; 4ODA; 4QC9; 4QCA; 4QCB; 4UQM; 4WPK; 4WPL; 4WRU; 4WRV; 4WRW; 4WRX; 4WRY; 4WRZ; 4WS0; 4WS1; 4WS2; 4WS3; 4WS4; 4WS5; 4WS6; 4WS7; 4WS8; 4YGM; 4YIG; 5AYR; 5AYS; 5EUG; 5JK7; 5JKR; 5JKS; 5JKT; 5JX0; 5JX3; 5JX8; 5NN7; 5NNH; 5NNU; 5X55; 6LYD; 6LYE; 6LYJ; 6LYV; 6VBA; 7V7C; 8I61; 8I62; 8I63; 8I64; 8I65; 8I66; 8I67; 8I68; 8I69; 8I6A; 8I6B; 8I6C; 8I6D » more |