PROSITE entry PS00161
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General information about the entry
Entry name [info] | ISOCITRATE_LYASE |
Accession [info] | PS00161 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-DEC-2001 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00145 |
Associated ProRule [info] | PRU10119 |
Name and characterization of the entry
Description [info] | Isocitrate lyase signature. |
Pattern [info] |
K-[KR]-C-G-H-[LMQR]. |
Numerical results [info]
Total number of hits | 71 in 71 different sequences |
Number of true positive hits | 68 in 68 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 3 in 3 different sequences |
Number of false negative sequences | 8 |
Number of 'partial' sequences | 2 |
Precision (true positives / (true positives + false positives)) | 95.77 % |
Recall (true positives / (true positives + false negatives)) | 89.47 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Site [info] | active_site(?) at position 3 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
68 sequences
ACEA1_MYCBO (P0A5H4), ACEA1_MYCTE (H8EVV4), ACEA1_MYCTO (P9WKK6), ACEA1_SOYBN (P45456), ACEA2_MYCBO (Q7TZA8), ACEA2_MYCTE (H8F3R6), ACEA2_MYCTO (Q8VJU4), ACEA2_SOYBN (P45457), ACEAA_MYCTU (O07718), ACEA_ARATH (P28297), ACEA_ASPFU (Q6T267), ACEA_BRANA (P25248), ACEA_CANAX (Q9P8Q7), ACEA_CANGA (Q6FPK7), ACEA_CANTR (P20014), ACEA_COCIM (Q96TP5), ACEA_COPC7 (A8NR45), ACEA_COPCI (O13439), ACEA_COREF (Q8RQN6), ACEA_CORGL (P42449), ACEA_CUCMA (P93110), ACEA_CUCSA (P49296), ACEA_CYBJA (Q9HFN2), ACEA_DEBHA (Q6BRY4), ACEA_DENCR (Q9SE26), ACEA_ECOL6 (P0A9G7), ACEA_ECOLI (P0A9G6), ACEA_EMENI (P28298), ACEA_EREGS (O94198), ACEA_GIBZE (Q4HYR2), ACEA_GOSHI (P17069), ACEA_HALH5 (Q9K9H0), ACEA_KLULA (Q8NJ72), ACEA_LEPMC (Q86ZF1), ACEA_MYCLE (P46831), ACEA_MYCTU (P9WKK7), ACEA_NEUCR (P28299), ACEA_ORYSJ (Q6Z6M4), ACEA_PICPA (Q9C124), ACEA_PINTA (Q43097), ACEA_PYRO3 (L7HUY5), ACEA_PYRO7 (P0CT06), ACEA_RHOFA (P41554), ACEA_RICCO (P15479), ACEA_SALTY (P51066), ACEA_SOLLC (P49297), ACEA_TALMA (Q96WZ5), ACEA_YARLI (P41555), ACEA_YEAST (P28240), ACEB_EMENI (C8V9Y5), ACEB_HYPAI (G9NNY7), ACEB_YARLI (Q6BZP5), ACEB_YEAST (Q12031), CPPM_ARATH (O49290), CPPM_STRHY (P11435), DML_EUBBA (Q0QLE4), GCP_CAEEL (Q10663), MMGF_BACSU (P54528), MMGF_HALH5 (Q9Z9T7), PDP_DIACA (Q05957), PRPB1_CORGL (Q8NSH8), PRPB2_CORGL (Q8NSL2), PRPB_AERPE (Q9YFM7), PRPB_CUPNE (Q937P0), PRPB_ECOLI (P77541), PRPB_SALTY (Q56062), PRPB_SHEON (Q8EJW1), PRPB_VIBCH (Q9KSC2)» more
|
UniProtKB/Swiss-Prot False negative sequences |
8 sequences
ACEA_PSEAE (Q9I0K4), ACEB_SCHPO (Q9P6J1), FOM1_STRWE (P96074), PEPM_MYTED (P56839), PEPM_STRHY (P29247), PEPM_STRVT (O86937), PEPM_TETPY (P33182), PPHA_VARSP (Q84G06)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
ACEA_ACICA (P28467), ACEA_HELAN (P20699) |
UniProtKB/Swiss-Prot False positive sequences |
3 sequences
KLKB1_BOVIN (Q2KJ63), RING2_CAEEL (H2KYH3), SYL_ANAMM (Q5PB38) |
PDB [Detailed view] |
24 PDB
1DQU; 1F61; 1F8M; 1IGW; 1MUM; 1O5Q; 1OQF; 1UJQ; 1ZLP; 5DQL; 5E9F; 5E9G; 5E9H; 6EDW; 6EDZ; 6EE1; 6VB9; 6WSI; 6XPP; 7CP1; 7EBC; 7EBE; 7EBF; 7RB1 » more |