PROSITE entry PS00165
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General information about the entry
Entry name [info] | DEHYDRATASE_SER_THR |
Accession [info] | PS00165 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00149 |
Name and characterization of the entry
Description [info] | Serine/threonine dehydratases pyridoxal-phosphate attachment site. |
Pattern [info] |
[DESH]-x(4,5)-[STVG]-{EVKD}-[AS]-[FYI]-K-[DLIFSA]-[RLVMF]-[GA]-[LIVMGA]. |
Numerical results [info]
Total number of hits | 225 in 225 different sequences |
Number of true positive hits | 192 in 192 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 33 in 33 different sequences |
Number of false negative sequences | 19 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 85.33 % |
Recall (true positives / (true positives + false negatives)) | 91.00 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Site [info] | pyridoxal_phosphate at position 7 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
192 sequences
AKS11_ALTAL (V5Y0V0), ILVA_BACSU (P37946), ILVA_BURM1 (P53607), ILVA_CORGL (Q04513), ILVA_ECOLI (P04968), ILVA_HAEIN (P46493), ILVA_HALH5 (Q9KC63), ILVA_LACLA (Q02145), ILVA_MYCBO (P66898), ILVA_MYCLE (Q9X7F1), ILVA_MYCTO (P9WG94), ILVA_MYCTU (P9WG95), ILVA_PASMU (Q9CKJ2), ILVA_SALTY (P20506), ILVA_STAA3 (Q2FF63), ILVA_STAA8 (Q2FWJ9), ILVA_STAAB (Q2YUE8), ILVA_STAAC (Q5HEE0), ILVA_STAAM (Q99SJ1), ILVA_STAAN (Q7A4H2), ILVA_STAAR (Q3V7T5), ILVA_STAAS (Q3V7T4), ILVA_STAAW (Q8NVI8), ILVA_STAEQ (Q5HMF5), ILVA_STAES (Q8CNK9), ILVA_STAHJ (Q4L7U4), ILVA_STAS1 (Q49Z16), LTHAD_PSESP (A4F2N8), LTHAD_YEAST (P36007), SDH1_YEASX (P0CF23), SDHD1_ECOL5 (Q0TF95), SDHD1_ECOUT (Q1R901), SDHD2_ECOL5 (Q0T953), SDHD2_ECOUT (Q1R2Q6), SDHD_ACIAD (Q6FDC1), SDHD_ACIB5 (B7I8P7), SDHD_ACIBC (B2HVC6), SDHD_ACIBT (A3M3B1), SDHD_AERHH (A0KI76), SDHD_AERS4 (A4SPX2), SDHD_BACAC (C3L7G5), SDHD_BACAH (A0RCF8), SDHD_BACAN (Q81S85), SDHD_BACC1 (Q73AC5), SDHD_BACC2 (B7IR88), SDHD_BACC3 (C1EPF1), SDHD_BACC4 (B7HID8), SDHD_BACC7 (B7HMG6), SDHD_BACCR (Q81F73), SDHD_BACCZ (Q63D23), SDHD_BACHK (Q6HKG3), SDHD_BACMK (A9VPH9), SDHD_BACSU (P54555), SDHD_CHRVO (Q7NUP9), SDHD_CITK8 (A8ACI7), SDHD_COLP3 (Q47V69), SDHD_DESHY (Q24WR0), SDHD_ECO24 (A7ZPH2), SDHD_ECO45 (B7MH26), SDHD_ECO55 (B7LBR9), SDHD_ECO57 (Q8XCK5), SDHD_ECO5E (B5YYW7), SDHD_ECO81 (B7MY25), SDHD_ECO8A (B7M6N5), SDHD_ECOBW (C4ZVQ3), SDHD_ECODH (B1X9N9), SDHD_ECOHS (A8A2M0), SDHD_ECOK1 (A1ADP3), SDHD_ECOL6 (Q8FFF4), SDHD_ECOLC (B1IX96), SDHD_ECOLI (P00926), SDHD_ECOLU (B7N5W6), SDHD_ECOSE (B6I6R7), SDHD_ESCF3 (B7LK20), SDHD_GEOKA (Q75TC9), SDHD_GEOSE (Q75TH5), SDHD_HALH5 (Q9KC12), SDHD_HISS1 (Q0I5V1), SDHD_HISS2 (B0UWV3), SDHD_LACPL (Q88TY1), SDHD_LIMF3 (B2GBP8), SDHD_OENOB (Q04G28), SDHD_PEDPA (Q03DF6), SDHD_PHOLL (Q7N5H9), SDHD_PHOPR (Q6LHF5), SDHD_PSEA7 (A6V271), SDHD_PSEA8 (B7V2Y0), SDHD_PSEAB (Q02QJ1), SDHD_PSEAE (Q9HYN9), SDHD_PSEMY (A4XXF3), SDHD_PSEP1 (A5W4Y8), SDHD_PSEPG (B0KGK3), SDHD_SALA4 (B5EY75), SDHD_SALAR (A9MKH2), SDHD_SALCH (Q57I32), SDHD_SALDC (B5FMC1), SDHD_SALEP (B5QU31), SDHD_SALG2 (B5RG23), SDHD_SALHS (B4TA53), SDHD_SALNS (B4SY68), SDHD_SALPA (Q5PKR3), SDHD_SALPB (A9MWI4), SDHD_SALPC (C0Q241), SDHD_SALPK (B5BII6), SDHD_SALSV (B4TMW9), SDHD_SALTI (Q8Z2L4), SDHD_SALTY (Q8ZL08), SDHD_SERP5 (A8GES6), SDHD_SHIBS (Q31YA5), SDHD_SHIDS (Q32DH8), SDHD_SHIF8 (Q0T2D1), SDHD_SHIFL (Q83MK8), SDHD_SHISS (Q3YZG4), SDHD_SHOC1 (Q5WGL6), SDHD_STAS1 (Q4A041), SDHD_VIBC1 (A7MYG2), SDHD_VIBC3 (A5F0M6), SDHD_VIBCH (Q9KL72), SDHD_VIBCM (C3LWD9), SDHD_VIBPA (Q87QA2), SDHD_YERE8 (A1JJW5), SDHL_BOVIN (Q0VCW4), SDHL_DICDI (Q86B06), SDHL_HUMAN (P20132), SDHL_MOUSE (Q8VBT2), SDHL_RAT(P09367), SDHL_YEAS1 (B3LU13), SDHL_YEAS6 (B5VKE8), SDHL_YEAS7 (A6ZVB1), SDHL_YEAS8 (C8ZAU6), SDSL_HUMAN (Q96GA7), SRR_ARATH (Q2PGG3), SRR_BOVIN (A0JNI4), SRR_HUMAN (Q9GZT4), SRR_MOUSE (Q9QZX7), SRR_RAT (Q76EQ0), STDH_YEAST (P25379), TD1_SOLLC (A0FKE6), TD2_SOLLC (P25306), TDCB_ECO57 (P0AGF8), TDCB_ECOL6 (P0AGF7), TDCB_ECOLI (P0AGF6), TDCB_SALTY (P11954), TDCB_SHIFL (P0AGF9), TDCB_STAA3 (Q2FH01), TDCB_STAA8 (Q2FYJ3), TDCB_STAAB (Q2YY67), TDCB_STAAC (Q5HFY5), TDCB_STAAM (Q99U50), TDCB_STAAN (Q7A5L8), TDCB_STAAR (Q6GGX0), TDCB_STAAS (Q6G9C4), TDCB_STAAW (Q8NWQ4), TD_NICAT(Q9AXU4), THD1_ARATH (Q9ZSS6), THDH_BLAAD (O42615), THDH_SCHPO (O94634), THDH_YEAST (P00927), THNS2_DANRE (Q2YDP8), THNS2_XENLA (Q5XH07), THRC1_ARATH (Q9S7B5), THRC2_ARATH (Q9SSP5), THRC_BACSL (P09123), THRC_BACSU (P04990), THRC_BUCAI (P57289), THRC_BUCAP (Q8K9V1), THRC_BUCBP (Q89AR5), THRC_CORGL (P23669), THRC_ECOLI (P00934), THRC_EREGS (Q00063), THRC_HAEIN (P44503), THRC_HALH5 (Q9K7E3), THRC_HELPJ (Q9ZMX5), THRC_HELPY (O24924), THRC_METAC (Q8TQD4), THRC_METGL (P37145), THRC_METJA (Q58860), THRC_MYCBO (P66903), THRC_MYCLE (P45837), THRC_MYCS2 (A0R220), THRC_MYCTO (P9WG58), THRC_MYCTU (P9WG59), THRC_PSEAE (P29363), THRC_SCHPO (Q42598), THRC_SERMA (P27735), THRC_SOLTU (Q9MT28), THRC_SYNY3 (P74193), THRC_YEAST (P16120), TSAL_GEOSL (Q74FW6), TSAL_THEMA (Q9WYJ1), Y4TJ_SINFN (P55664), YI168_YEAST (P0CF21)» more
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UniProtKB/Swiss-Prot False negative sequences |
19 sequences
SDHD_ACIET (B9MIR7), SDHD_ACISJ (A1W838), SDHD_BURL3 (Q396Y3), SDHD_BURP0 (A3P975), SDHD_BURP1 (Q3JJ76), SDHD_BURP6 (A3NNQ0), SDHD_BURPS (Q63IF8), SDHD_BURTA (Q2T8Q2), SDHD_CARHZ (Q3AFZ5), SDHD_CUPPJ (Q46X58), SDHD_FUSNN (Q8RFX6), SDHD_HAHCH (Q2SHX7), SDHD_PARC0 (A1TPW5), SDHD_POLNA (A1VWK8), SDHD_RHIE6 (B3PYT5), SDHD_RHILW (B5ZNC1), SDHD_SINMW (A6UB95), SRR_SCHPO (O59791), THD1_CICAR (Q39469)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
TD_SOLTU(P31212) |
UniProtKB/Swiss-Prot False positive sequences |
33 sequences
ACTN3_BOVIN (Q0III9), ACTN3_HUMAN (Q08043), ACTN3_MOUSE (O88990), ACUF_ASPA1 (P9WF00), ALKD_PSEPU (P00885), AROE_PYRAE (Q8ZW89), BFPB_ECO11 (Q9S142), BFPB_ECO27 (Q47068), CY551_ALLVD (P80549), CY551_PSEAE (P00099), CYSM_CAMJE (P71128), DHOM_HELPJ (Q9ZL20), DHOM_HELPY (P56429), DIP2A_MOUSE (Q8BWT5), DNLJ_BEII9 (B2IGH4), FEOB_LEPIC (Q72SI0), FEOB_LEPIN (Q8F332), GCST_PSESM (Q88AS0), HNRLL_HUMAN (Q8WVV9), HNRLL_MOUSE (Q921F4), IQD18_ARATH (Q9MAM4), KAS1_STRVN (P16540), LCSA_PURLI (A0A179H164), PALLD_HUMAN (Q8WX93), PFMAE_PESFW (W3X7U2), PLSP2_LOTGI (B3A0P3), RL15_AGRFC (Q8UE36), RLR12_PLAHL (A0A0P1AZU2), RS20_CUPMC (Q1LJ99), RS20_CUPPJ (Q46XK7), RSMG_CLOB8 (A6M3M3), SYLC_DICDI (Q54N83), YDHG_SCHPO (Q92361)» more |
PDB [Detailed view] |
36 PDB
1E5X; 1KL7; 1P5J; 1PWE; 1PWH; 1TDJ; 1VB3; 2C2B; 2C2G; 2D1F; 2GN0; 2GN1; 2GN2; 2RKB; 3HMK; 3IAU; 3L6B; 3L6C; 3L6R; 3R0X; 3R0Z; 3SS7; 3SS9; 4H27; 5X2L; 6AA9; 6SLH; 6ZSP; 6ZUJ; 7NBC; 7NBD; 7NBF; 7NBG; 7NBH; 8ZKV; 8ZLV » more |