PROSITE logo

PROSITE entry PS00181


View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] GLNA_ATP
Accession [info] PS00181
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00162

Name and characterization of the entry

Description [info] Glutamine synthetase putative ATP-binding region signature.
Pattern [info] 
K-P-[LIVMFYA]-x(3,5)-[NPAT]-[GA]-[GSTAN]-[GA]-x-H-x(3)-S.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 172 in 172 different sequences
Number of true positive hits 172 in 172 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 13
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 92.97 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 172 sequences 

3HAPM_CUPPJ (Q46ZL2), GLN11_ARATH (Q56WN1), GLN11_ORYSJ (P14656), 

GLN12_ARATH (Q8LCE1), GLN12_ORYSJ (P14654), GLN13_ARATH (Q9LVI8), 
GLN13_ORYSJ (Q4W8D0), GLN14_ARATH (Q9FMD9), GLN15_ARATH (Q8GXW5), 
GLN1A_BACCE (P19064), GLN1A_BACSU (P12425), GLN1A_CLOSA (P10656), 
GLN1A_LACDE (P45627), GLN1A_LACLA (Q9CDL9), GLN1A_MYCBO (P64246), 
GLN1A_MYCS2 (A0R083), GLN1A_MYCTO (P9WN36), GLN1A_MYCTU (P9WN37), 
GLN1A_STAAC (Q5HGC3), GLN1A_STAAM (P60890), GLN1A_STAAN (P99095), 
GLN1A_STAAR (Q6GHC6), GLN1A_STAAS (Q6G9Q4), GLN1A_STAAU (P0A040), 
GLN1A_STAAW (P0A039), GLN1A_STAEQ (Q5HPN2), GLN1A_STAES (Q8CSR8), 
GLN1A_THEMA (P36205), GLN1B_ACIFR (P07804), GLN1B_AZOBR (P10583), 
GLN1B_AZOC5 (P94126), GLN1B_AZOVI (P22248), GLN1B_BRADU (P05457), 
GLN1B_CERSP (P43518), GLN1B_ECO57 (P0A9C7), GLN1B_ECOL6 (P0A9C6), 
GLN1B_ECOLI (P0A9C5), GLN1B_FRAAL (P46033), GLN1B_HAEIN (P43794), 
GLN1B_HELPJ (Q9ZLW5), GLN1B_HELPY (P94845), GLN1B_METCA (P15124), 
GLN1B_MICDP (P33035), GLN1B_MYCBO (P0A591), GLN1B_MYCS2 (A0R079), 
GLN1B_MYCTO (P9WN38), GLN1B_MYCTU (P9WN39), GLN1B_NEIGO (P25821), 
GLN1B_NOSS1 (P00964), GLN1B_PASMU (Q9CLP2), GLN1B_PROHU (P28786), 
GLN1B_PSEAE (Q9HU65), GLN1B_PSETA (Q3V5W6), GLN1B_RHILV (P09826), 
GLN1B_RHIME (Q59747), GLN1B_RHOCA (P13499), GLN1B_SALTI (P0A1P7), 
GLN1B_SALTY (P0A1P6), GLN1B_SHIFL (P0A9C8), GLN1B_STRCO (P15106), 
GLN1B_STRFL (P77958), GLN1B_STRVR (Q05542), GLN1B_SYNP2 (P28605), 
GLN1B_SYNY3 (P77961), GLN1B_TRITH (P51120), GLN1B_VIBAL (P19904), 
GLN1B_VIBCH (Q9KNJ2), GLNA1_ALNGL (O04867), GLNA1_CHLRE (Q42688), 
GLNA1_DAUCA (O22504), GLNA1_DROME (P20477), GLNA1_LOTJA (Q42899), 
GLNA1_MAIZE (P38559), GLNA1_MEDSA (P04078), GLNA1_METMA (Q8PY99), 
GLNA1_PEA   (P08282), GLNA1_PHAVU (P04770), GLNA1_SOYBN (P24099), 
GLNA1_VITVI (P51118), GLNA2_ARATH (Q43127), GLNA2_BRADU (P04772), 
GLNA2_CHLRE (Q42689), GLNA2_DAUCA (O22506), GLNA2_DROME (P20478), 
GLNA2_FRAAL (P20805), GLNA2_HORVU (P13564), GLNA2_MAIZE (P38560), 
GLNA2_MEDSA (Q9XQ94), GLNA2_ORYSJ (P14655), GLNA2_PEA   (P08281), 
GLNA2_PHAVU (P04771), GLNA2_RHILP (Q02154), GLNA2_RHIML (P45626), 
GLNA2_SOYBN (O82560), GLNA2_STRCO (Q9RDS6), GLNA2_STRHY (P22878), 
GLNA2_STRVR (P19432), GLNA2_VITVI (P51119), GLNA3_BACFR (P15623), 
GLNA3_BUTFI (Q05650), GLNA3_DICDI (Q54WR9), GLNA3_HALMT (I3R176), 
GLNA3_HORVU (Q06378), GLNA3_LUPAN (P14636), GLNA3_MAIZE (P38561), 
GLNA3_MEDSA (Q43785), GLNA3_PEA   (P07694), GLNA3_PHAVU (P00965), 
GLNA3_RHILP (P31592), GLNA3_RHIME (O87393), GLNA4_MAIZE (P38562), 
GLNA4_PEA   (Q43066), GLNA4_PHAVU (P15102), GLNA5_MAIZE (P38563), 
GLNAC_BRANA (Q42624), GLNAC_MAIZE (P25462), GLNA_ACOCA  (Q9QY94), 
GLNA_AGABI  (O00088), GLNA_AMAMU  (Q8X169), GLNA_ARCFU  (O29313), 
GLNA_BOVIN  (P15103), GLNA_CANGA  (Q6FMT6), GLNA_CANLF  (Q8HZM5), 
GLNA_CHICK  (P16580), GLNA_COLGL  (Q12613), GLNA_CRIGR  (P04773), 
GLNA_CRYNB  (P0CN85), GLNA_CRYNJ  (P0CN84), GLNA_DEBHA  (Q6B4U7), 
GLNA_DUNSA  (P11600), GLNA_EMENI  (Q96V52), GLNA_EREGS  (Q75BT9), 
GLNA_FUSSH  (Q9UUN6), GLNA_HALSA  (Q9HNI2), GLNA_HALVD  (P43386), 
GLNA_HEBCY  (Q96UV5), GLNA_HUMAN  (P15104), GLNA_KLULA  (Q874T6), 
GLNA_LACSA  (P23712), GLNA_LUPLU  (P52782), GLNA_MACFA  (Q4R7U3), 
GLNA_METJA  (Q60182), GLNA_METMP  (O59648), GLNA_METTH  (O27612), 
GLNA_METVO  (P21154), GLNA_MIMIV  (Q5UR44), GLNA_MOUSE  (P15105), 
GLNA_NEUCR  (Q86ZF9), GLNA_NICPL  (P12424), GLNA_PANAR  (Q04831), 
GLNA_PIG(P46410), GLNA_PINSY  (P52783), GLNA_PYRAB  (Q9UY99), 
GLNA_PYRFU  (Q05907), GLNA_PYRHO  (O58097), GLNA_PYRWO  (P36687), 
GLNA_RAT(P09606), GLNA_SACS2  (P23794), GLNA_SCHPO  (Q09179), 
GLNA_SQUAC  (P41320), GLNA_SUIBO  (Q8J1R3), GLNA_SULAC  (Q9HH09), 
GLNA_THEKO  (O08467), GLNA_THET8  (Q5SIP0), GLNA_TUBBO  (Q86ZU6), 
GLNA_VIGAC  (P32289), GLNA_XENLA  (P51121), GLNA_YARLI  (Q6C3E0), 
GLNA_YEAST  (P32288), GMAS_METMY  (A9ZPH9), GMAS_METUF  (F5RH07), 
PUUA_ECOLI  (P78061)
» more

UniProtKB/Swiss-Prot
False negative sequences		 13 sequences 

GLN1B_AQUAE (O66514), GLNA1_DICDI (Q86B00), GLNA2_DICDI (P0C7B6), 

GLNA2_HALMT (I3R584), GLNA3_STRCO (Q9KZC7), GLNA4_STRCO (O88070), 
GLNA_CAEEL  (P34497), GLNA_GIBFU  (Q9C2U9), LGSN_CANLF  (Q1ZZS1), 
LGSN_HUMAN  (Q5TDP6), LGSN_MOUSE  (Q8CIX8), LGSN_RABIT  (Q0GA40), 
LGSN_RAT(Q7TT51)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 4 sequences 

GLN1B_PHOLP (P20479), GLNA2_EMIHU (P81643), GLNA2_PINPS (P81107), 

GLNA_VITSX  (P85087)
» more

PDB
[Detailed view]		 38 PDB

1F1H; 1F52; 1FPY; 1HTO; 1HTQ; 1LGR; 2BVC; 2D3A; 2D3B; 2D3C; 2GLS; 2LGS; 2OJW; 2QC8; 2UU7; 2WGS; 2WHI; 3FKY; 3NG0; 3ZXR; 3ZXV; 4ACF; 4LNF; 4LNI; 4LNK; 4LNN; 4LNO; 4S0R; 4XYC; 5LDF; 5ZLI; 5ZLP; 7CPR; 7EVT; 7U5N; 7W85; 8DNU; 8ECY
» more