PROSITE logo

PROSITE entry PS00182


View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] GLNA_ADENYLATION
Accession [info] PS00182
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-JUN-1992 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00162

Name and characterization of the entry

Description [info] Glutamine synthetase class-I adenylation site.
Pattern [info] 
K-[LIVM]-x(5)-[LIVMA]-D-[RK]-[DN]-[LI]-Y.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 36 in 36 different sequences
Number of true positive hits 35 in 35 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.22 %
Recall (true positives / (true positives + false negatives)) 92.11 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] adenylation at position 9
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 35 sequences 

3HAPM_CUPPJ (Q46ZL2), GLN1A_BACCE (P19064), GLN1A_BACSU (P12425), 

GLN1B_ACIFR (P07804), GLN1B_AZOBR (P10583), GLN1B_AZOC5 (P94126), 
GLN1B_AZOVI (P22248), GLN1B_BRADU (P05457), GLN1B_ECO57 (P0A9C7), 
GLN1B_ECOL6 (P0A9C6), GLN1B_ECOLI (P0A9C5), GLN1B_FRAAL (P46033), 
GLN1B_HAEIN (P43794), GLN1B_METCA (P15124), GLN1B_MICDP (P33035), 
GLN1B_MYCBO (P0A591), GLN1B_MYCS2 (A0R079), GLN1B_MYCTO (P9WN38), 
GLN1B_MYCTU (P9WN39), GLN1B_NEIGO (P25821), GLN1B_NOSS1 (P00964), 
GLN1B_PASMU (Q9CLP2), GLN1B_PROHU (P28786), GLN1B_PSEAE (Q9HU65), 
GLN1B_PSETA (Q3V5W6), GLN1B_RHILV (P09826), GLN1B_RHIME (Q59747), 
GLN1B_SALTI (P0A1P7), GLN1B_SALTY (P0A1P6), GLN1B_SHIFL (P0A9C8), 
GLN1B_STRCO (P15106), GLN1B_STRFL (P77958), GLN1B_STRVR (Q05542), 
GLN1B_VIBAL (P19904), GLN1B_VIBCH (Q9KNJ2)
» more

UniProtKB/Swiss-Prot
False negative sequences		 3 sequences 

GLNA2_HALMT (I3R584), GLNA3_STRCO (Q9KZC7), GLNA4_STRCO (O88070)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			1 sequence
			


			
THN_BRARP   (Q9SBK8)


				
	

	

		PDB
[Detailed view]		
		
			23 PDB
			


			1F1H; 1F52; 1FPY; 1HTO; 1HTQ; 1LGR; 2BVC; 2GLS; 2LGS; 2WGS; 2WHI; 3ZXR; 
			
				3ZXV; 4ACF; 4LNF; 4LNI; 4LNK; 4LNN; 4LNO; 4S0R; 4XYC; 5LDF; 7W85
			
			

			» more