PROSITE entry PS00182

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General information about the entry

Entry name [info]	GLNA_ADENYLATION
Accession [info]	PS00182
Entry type [info]	PATTERN
Date [info]	01-APR-1990 CREATED; 01-JUN-1992 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00162

Name and characterization of the entry

Description [info]	Glutamine synthetase class-I adenylation site.
Pattern [info]	K-[LIVM]-x(5)-[LIVMA]-D-[RK]-[DN]-[LI]-Y.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_05 which contains 572'214 sequence entries.

Total number of hits	36 in 36 different sequences
Number of true positive hits	35 in 35 different sequences
Number of 'unknown' hits	0
Number of false positive hits	1
Number of false negative sequences	3
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	97.22 %
Recall (true positives / (true positives + false negatives))	92.11 %

Comments [info]

Taxonomic range [info]	Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Site [info]	adenylation at position 9
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	35 sequences 3HAPM_CUPPJ (Q46ZL2), GLN1A_BACCE (P19064), GLN1A_BACSU (P12425), GLN1B_ACIFR (P07804), GLN1B_AZOBR (P10583), GLN1B_AZOC5 (P94126), GLN1B_AZOVI (P22248), GLN1B_BRADU (P05457), GLN1B_ECO57 (P0A9C7), GLN1B_ECOL6 (P0A9C6), GLN1B_ECOLI (P0A9C5), GLN1B_FRAAL (P46033), GLN1B_HAEIN (P43794), GLN1B_METCA (P15124), GLN1B_MICDP (P33035), GLN1B_MYCBO (P0A591), GLN1B_MYCS2 (A0R079), GLN1B_MYCTO (P9WN38), GLN1B_MYCTU (P9WN39), GLN1B_NEIGO (P25821), GLN1B_NOSS1 (P00964), GLN1B_PASMU (Q9CLP2), GLN1B_PROHU (P28786), GLN1B_PSEAE (Q9HU65), GLN1B_PSETA (Q3V5W6), GLN1B_RHILV (P09826), GLN1B_RHIME (Q59747), GLN1B_SALTI (P0A1P7), GLN1B_SALTY (P0A1P6), GLN1B_SHIFL (P0A9C8), GLN1B_STRCO (P15106), GLN1B_STRFL (P77958), GLN1B_STRVR (Q05542), GLN1B_VIBAL (P19904), GLN1B_VIBCH (Q9KNJ2) » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	3 sequences GLNA2_HALMT (I3R584), GLNA3_STRCO (Q9KZC7), GLNA4_STRCO (O88070)
UniProtKB/Swiss-Prot False positive sequences	1 sequence THN_BRARP (Q9SBK8)
PDB [Detailed view]	24 PDB 1F1H; 1F52; 1FPY; 1HTO; 1HTQ; 1LGR; 2BVC; 2GLS; 2LGS; 2WGS; 2WHI; 3ZXR; 3ZXV; 4ACF; 4LNF; 4LNI; 4LNK; 4LNN; 4LNO; 4S0R; 4XYC; 5LDF; 7W85; 8FBP » more