 |
|
| Entry: PS00183 |
General information about the entry
| Entry name [info] | UBC_1 |
| Accession [info] | PS00183 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-APR-2006 DATA UPDATE; 12-AUG-2020 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00163 |
| Associated ProRule [info] | PRU10133 |
Name and characterization of the entry
| Description [info] | Ubiquitin-conjugating (UBC) active site signature. |
| Pattern [info] |
[FYWLSP]-H-[PC]-[NHL]-[LIV]-x(3,4)-G-x-[LIVP]-C-[LIV]-x(1,2)-[LIVR]. |
Numerical results [info]
| Total number of hits | 241 in 241 different sequences |
| Number of true positive hits | 241 in 241 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 80 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 75.08 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Eukaryotic viruses |
| Maximum number of repetitions [info] | 1 |
| Site [info] | active_site at position 10 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
241 sequences
PEX4_ARATH (Q8LGF7 ), RCE1_ARATH (Q9SDY5 ), SCE1_ARATH (Q42551 ), U2D2B_MOUSE (Q6ZWY6 ), U2D2B_RAT (P70711 ), UB12L_ARATH (Q9ZU75 ), UB2D1_BOVIN (Q2TA10 ), UB2D1_HUMAN (P51668 ), UB2D1_MOUSE (P61080 ), UB2D1_RAT (D3ZDK2 ), UB2D2_BOVIN (Q1RMX2 ), UB2D2_HUMAN (P62837 ), UB2D2_MOUSE (P62838 ), UB2D2_PIG (Q06AA9 ), UB2D2_RAT (P62839 ), UB2D2_XENLA (P62840 ), UB2D3_HUMAN (P61077 ), UB2D3_MACFA (Q4R5N4 ), UB2D3_MOUSE (P61079 ), UB2D3_PONAB (Q5R4V7 ), UB2D3_RAT (P61078 ), UB2D4_HUMAN (Q9Y2X8 ), UB2D4_XENLA (A5PKP9 ), UB2E1_HUMAN (P51965 ), UB2E1_MOUSE (P52482 ), UB2E2_HUMAN (Q96LR5 ), UB2E2_MOUSE (Q91W82 ), UB2E3_BOVIN (Q2T9X7 ), UB2E3_HUMAN (Q969T4 ), UB2E3_MOUSE (P52483 ), UB2FA_MOUSE (Q9CY34 ), UB2FB_MOUSE (Q3UWQ3 ), UB2G1_HUMAN (P62253 ), UB2G1_MACFA (Q4R5Y8 ), UB2G1_MOUSE (P62254 ), UB2G1_RAT (P62255 ), UB2G2_BOVIN (Q17QG5 ), UB2G2_HUMAN (P60604 ), UB2G2_MOUSE (P60605 ), UB2G2_PONAB (Q5RF84 ), UB2L3_BOVIN (Q3MHP1 ), UB2L3_HUMAN (P68036 ), UB2L3_MOUSE (P68037 ), UB2L3_PONAB (Q5R5I4 ), UB2L5_HUMAN (A0A1B0GUS4), UB2L6_BOVIN (A5PJC4 ), UB2L6_HUMAN (O14933 ), UB2L6_MOUSE (Q9QZU9 ), UB2L6_RAT (Q4V8J2 ), UB2R1_HUMAN (P49427 ), UB2R1_MOUSE (Q8CFI2 ), UB2R2_HUMAN (Q712K3 ), UB2R2_MOUSE (Q6ZWZ2 ), UB2R2_RABIT (Q29503 ), UB2SA_XENLA (A1L3K1 ), UB2SB_XENLA (Q8AVU2 ), UB2SC_XENLA (Q76EZ2 ), UBC10_ARATH (P35133 ), UBC10_DROME (Q7K738 ), UBC11_ARATH (P35134 ), UBC11_SCHPO (O00103 ), UBC11_YEAST (P52492 ), UBC12_ARATH (Q9C9Y7 ), UBC12_ASHGO (Q75AF2 ), UBC12_BOVIN (A3KN22 ), UBC12_CAEEL (Q9XVK5 ), UBC12_CANGA (Q6FVQ8 ), UBC12_DICDI (Q54TI6 ), UBC12_HUMAN (P61081 ), UBC12_KLULA (Q6CSW8 ), UBC12_MOUSE (P61082 ), UBC12_SCHPO (O74549 ), UBC12_XENLA (Q6DCZ9 ), UBC12_XENTR (Q6P8D9 ), UBC12_YARLI (Q6C9W0 ), UBC12_YEAST (P52491 ), UBC13_ARATH (Q42541 ), UBC13_CAEEL (Q95XX0 ), UBC13_SCHPO (O13685 ), UBC13_YEAST (P52490 ), UBC14_ARATH (P42747 ), UBC15_ARATH (P42743 ), UBC15_SCHPO (Q9Y818 ), UBC16_ARATH (Q9FWT2 ), UBC17_ARATH (O23239 ), UBC18_ARATH (Q9FMM0 ), UBC19_ARATH (Q9LJZ5 ), UBC1_ARATH (P25865 ), UBC1_CAEEL (P52478 ), UBC1_COLGL (O74196 ), UBC1_MAGO7 (Q9UVR2 ), UBC1_SCHPO (O74810 ), UBC1_YEAST (P21734 ), UBC20_ARATH (Q8L7T3 ), UBC21_CAEEL (P52484 ), UBC22_ARATH (Q9FF66 ), UBC27_ARATH (Q9FI61 ), UBC28_ARATH (Q94F47 ), UBC29_ARATH (Q9SLE4 ), UBC2M_DROME (Q9VSF3 ), UBC2_ARATH (P42745 ), UBC2_ASHGO (Q75EB8 ), UBC2_ASPFU (Q4WLA7 ), UBC2_CAEEL (P35129 ), UBC2_CANAL (O74201 ), UBC2_CANGA (Q6FR76 ), UBC2_CRYNB (P0CS17 ), UBC2_CRYNJ (P0CS16 ), UBC2_DEBHA (Q6BU36 ), UBC2_DICDI (Q553F3 ), UBC2_EMENI (Q96UP5 ), UBC2_KLULA (Q6CUD9 ), UBC2_MEDSA (P35130 ), UBC2_NECHA (P78717 ), UBC2_NEUCR (P52493 ), UBC2_SCHPO (P23566 ), UBC2_TRIHA (Q58FS2 ), UBC2_USTMA (Q4PFA5 ), UBC2_WHEAT (P25866 ), UBC2_YARLI (Q6C093 ), UBC2_YEAST (P06104 ), UBC30_ARATH (Q9FKT3 ), UBC35_ARATH (Q94A97 ), UBC36_ARATH (Q9FZ48 ), UBC37_ARATH (Q941B6 ), UBC3_ARATH (P42746 ), UBC3_YEAST (P14682 ), UBC4_ARATH (P42748 ), UBC4_CANAX (P43102 ), UBC4_SCHPO (P46595 ), UBC4_SOLLC (P35135 ), UBC4_WHEAT (P16577 ), UBC4_YEAST (P15731 ), UBC5A_ORYSJ (Q8S920 ), UBC5B_ORYSJ (Q8S919 ), UBC5_ARATH (P42749 ), UBC5_YEAST (P15732 ), UBC6_ARATH (P42750 ), UBC7_ARATH (Q42540 ), UBC7_CAEEL (P34477 ), UBC7_SCHPO (O00102 ), UBC7_WHEAT (P25868 ), UBC7_YEAST (Q02159 ), UBC84_DROME (P52487 ), UBC8_ARATH (P35131 ), UBC8_SCHPO (Q9P7R4 ), UBC8_YEAST (P28263 ), UBC9A_DANRE (Q9W6H5 ), UBC9B_DANRE (Q9DDJ0 ), UBC9_ARATH (P35132 ), UBC9_CAEEL (Q95017 ), UBC9_CHICK (P63283 ), UBC9_DICDI (Q9NGP4 ), UBC9_HUMAN (P63279 ), UBC9_ICTTR (Q2EF73 ), UBC9_MESAU (O09181 ), UBC9_MOUSE (P63280 ), UBC9_PAGMA (Q6Y1Z4 ), UBC9_RAT (P63281 ), UBC9_SCHPO (P40984 ), UBC9_XENLA (P63282 ), UBC9_XENTR (Q28CQ4 ), UBC9_YEAST (P50623 ), UBCD1_DROME (P25867 ), UBCD2_DROME (P52485 ), UBCD4_DROME (P52486 ), UBCD6_DROME (P25153 ), UBCX_DICDI (Q86IZ3 ), UBCX_PICAN (O60015 ), UBCX_PICPA (P49428 ), UBCX_YEAST (P29340 ), UBC_ASFB7 (P27949 ), UBC_ASFK5 (P0C8G3 ), UBC_ASFM2 (P25869 ), UBC_ASFP4 (P0C8G4 ), UBC_ASFWA (P0C8G5 ), UBE2A_HUMAN (P49459 ), UBE2A_MOUSE (Q9Z255 ), UBE2B_BOVIN (Q32P99 ), UBE2B_HUMAN (P63146 ), UBE2B_MOUSE (P63147 ), UBE2B_RABIT (P63148 ), UBE2B_RAT (P63149 ), UBE2C_BOVIN (Q32PA5 ), UBE2C_DICDI (Q54XS6 ), UBE2C_DROME (Q9VTY6 ), UBE2C_HUMAN (O00762 ), UBE2C_MACFA (Q4R9D1 ), UBE2C_MOUSE (Q9D1C1 ), UBE2C_SPISO (Q95044 ), UBE2C_XENLA (P56616 ), UBE2F_BOVIN (Q1RMW1 ), UBE2F_CHICK (Q5ZKX6 ), UBE2F_DANRE (Q6NY82 ), UBE2F_HUMAN (Q969M7 ), UBE2F_RAT (Q5U203 ), UBE2F_XENLA (Q6IRC7 ), UBE2F_XENTR (Q5M8Y2 ), UBE2H_BOVIN (Q32LN1 ), UBE2H_HUMAN (P62256 ), UBE2H_MOUSE (P62257 ), UBE2K_BOVIN (P61085 ), UBE2K_HUMAN (P61086 ), UBE2K_MOUSE (P61087 ), UBE2N_BOVIN (Q0P5K3 ), UBE2N_DICDI (Q86K32 ), UBE2N_DROME (P35128 ), UBE2N_HUMAN (P61088 ), UBE2N_MACFA (Q4R4I1 ), UBE2N_MOUSE (P61089 ), UBE2N_PONAB (Q5R7J6 ), UBE2N_RAT (Q9EQX9 ), UBE2S_BOVIN (Q1RML1 ), UBE2S_BRAFL (C3Z724 ), UBE2S_DANRE (Q4V908 ), UBE2S_DICDI (Q54I43 ), UBE2S_DROAN (B3MQV3 ), UBE2S_DROER (B3NWW9 ), UBE2S_DROGR (B4JKB7 ), UBE2S_DROME (Q9VX25 ), UBE2S_DROMO (B4L7V4 ), UBE2S_DROPE (B4H9W2 ), UBE2S_DROPS (B5DKM4 ), UBE2S_DROSE (B4IF39 ), UBE2S_DROSI (B4R6G1 ), UBE2S_DROVI (B4MA02 ), UBE2S_DROWI (B4N208 ), UBE2S_DROYA (B4Q2J2 ), UBE2S_HUMAN (Q16763 ), UBE2S_LITCT (C1C3R6 ), UBE2S_MOUSE (Q921J4 ), UBE2S_NEMVE (A7SE05 ), UBE2S_RAT (B5DFI8 ), UBE2S_XENTR (Q28F89 ), UBE2T_BOVIN (Q32LD2 ), UBE2T_DANRE (Q08BH7 ), UBE2T_HUMAN (Q9NPD8 ), UBE2T_MOUSE (Q9CQ37 ), UBE2T_XENLA (Q7ZY08 ), UBE2U_HUMAN (Q5VVX9 ), UBE2U_MACFA (Q95LM1 )» more
|
| UniProtKB/Swiss-Prot False negative sequences |
80 sequences
BIRC6_HUMAN (Q9NR09 ), BIRC6_MOUSE (O88738 ), COP10_ARATH (Q9LJD7 ), MMS2_SCHPO (O74983 ), MMS2_YEAST (P53152 ), U2D2L_HUMAN (Q8IWF7 ), U2QL1_DROME (Q9VM35 ), U2QL1_HUMAN (A1L167 ), U2QL1_MOUSE (A0PJN4 ), UB2J1_HUMAN (Q9Y385 ), UB2J1_MOUSE (Q9JJZ4 ), UB2J2_BOVIN (Q2TA03 ), UB2J2_DICDI (Q54LP7 ), UB2J2_HUMAN (Q8N2K1 ), UB2J2_MOUSE (Q6P073 ), UB2JL_DICDI (Q54AK6 ), UB2Q1_HUMAN (Q7Z7E8 ), UB2Q1_MOUSE (Q7TSS2 ), UB2Q2_BOVIN (Q32L27 ), UB2Q2_HUMAN (Q8WVN8 ), UB2Q2_MOUSE (Q8K2Z8 ), UB2Q2_RABIT (Q7YQJ9 ), UB2V1_BOVIN (Q3SZ52 ), UB2V1_CHICK (Q90879 ), UB2V1_HUMAN (Q13404 ), UB2V1_MOUSE (Q9CZY3 ), UB2V1_PONAB (Q5R4Z6 ), UB2V2_BOVIN (Q3SZ43 ), UB2V2_CHICK (Q5F3Z3 ), UB2V2_DANRE (Q6PEH5 ), UB2V2_HUMAN (Q15819 ), UB2V2_MOUSE (Q9D2M8 ), UB2V2_PONAB (Q5R6C9 ), UB2V2_RAT (Q7M767 ), UB2V2_XENLA (Q7ZYP0 ), UB2WA_DANRE (Q4VBH4 ), UBC14_SCHPO (Q9UTN8 ), UBC16_SCHPO (Q9P6I1 ), UBC17_CAEEL (Q11076 ), UBC1_MIMIV (Q5UQC9 ), UBC23_ARATH (Q9ZVX1 ), UBC24_ARATH (Q8VY10 ), UBC25_ARATH (Q9LUQ5 ), UBC25_CAEEL (Q93571 ), UBC26_ARATH (Q8GY87 ), UBC31_ARATH (Q9C8X7 ), UBC32_ARATH (Q9LSP7 ), UBC33_ARATH (Q9FK29 ), UBC34_ARATH (Q9SHI7 ), UBC38_ARATH (Q9C918 ), UBC39_ARATH (F4HPP7 ), UBC3_MIMIV (Q5UQ88 ), UBC4_MIMIV (Q5UQ40 ), UBC6_ASHGO (Q74Z34 ), UBC6_CANGA (Q6FQK7 ), UBC6_DEBHA (Q6BYG4 ), UBC6_KLULA (Q6CMG6 ), UBC6_SCHPO (O42646 ), UBC6_YEAST (P33296 ), UBCB_DICDI (Q94490 ), UBE2O_HUMAN (Q9C0C9 ), UBE2O_MOUSE (Q6ZPJ3 ), UBE2V_DICDI (Q54D06 ), UBE2W_BOVIN (A6H795 ), UBE2W_CAEEL (Q9XWF6 ), UBE2W_HUMAN (Q96B02 ), UBE2W_MOUSE (Q8VDW4 ), UBE2W_RAT (B5DEI4 ), UBE2Z_DANRE (Q6DG60 ), UBE2Z_HUMAN (Q9H832 ), UBE2Z_MOUSE (Q3UE37 ), UBE2Z_RAT (Q3B7D1 ), UBE2Z_XENLA (Q6PCF7 ), UBE2Z_XENTR (Q66KB0 ), UE2NL_HUMAN (Q5JXB2 ), UEV1A_ARATH (Q93YP0 ), UEV1B_ARATH (Q9CAB6 ), UEV1C_ARATH (Q9SJ44 ), UEV1D_ARATH (Q9SVD7 ), Y1A1_ENCCU (Q8SSK3 )» more |
| PDB [Detailed view] |
181 PDB
1A3S; 1AYZ; 1C4Z; 1FBV; 1FXT; 1FZY; 1J7D; 1JAS; 1JAT; 1JBB; 1KPS; 1PZV; 1Q34; 1QCQ; 1TTE; 1U9A; 1U9B; 1UR6; 1W4U; 1WZV; 1WZW; 1X23; 1Y6L; 1Y8X; 1YH2; 1YLA; 1YRV; 1Z2U; 1Z3D; 1Z5S; 1ZDN; 2AAK; 2AWF; 2BEP; 2BF8; 2C2V; 2C4P; 2CLW; 2CYX; 2E2C; 2EDI; 2EKE; 2ESK; 2ESO; 2ESP; 2ESQ; 2FUH; 2GJD; 2GRN; 2GRP; 2GRQ; 2GRR; 2KJH; 2KLY; 2LXP; 2O25; 2OB4; 2PE6; 2PX9; 2UCZ; 2VRR; 2XWU; 2Y4W; 2Y9M; 2Y9P; 2YB6; 2YBF; 2YHO; 2Z5D; 3A4S; 3BZH; 3E46; 3EB6; 3F92; 3FN1; 3FSH; 3H8K; 3HCT; 3HCU; 3K9O; 3K9P; 3L1Y; 3L1Z; 3O2U; 3OJ4; 3ONG; 3PTF; 3RCZ; 3RPG; 3RZ3; 3SQV; 3SY2; 3TGD; 3UIN; 3UIO; 3UIP; 3VON; 3W31; 4A49; 4A4B; 4A4C; 4CCG; 4DHI; 4DHJ; 4DHZ; 4II2; 4IP3; 4JQU; 4LAD; 4MDK; 4NR3; 4NRG; 4NRI; 4ONL; 4ONM; 4ONN; 4ORH; 4Q5E; 4Q5H; 4QPL; 4R8P; 4S3O; 4TKP; 4W5V; 4X57; 4Y1L; 4YII; 5A31; 5AIE; 5BNB; 5D1K; 5D1L; 5D1M; 5D2M; 5EGG; 5F6D; 5F6E; 5F6U; 5F6V; 5F6W; 5F6X; 5F6Y; 5FQ2; 5HPT; 5IFR; 5JNE; 5KHR; 5KNL; 5L9T; 5LBN; 5NGZ; 5NKZ; 5NL8; 5OJJ; 5OJW; 5YWR; 6CYO; 6CYR; 6D4P; 6D68; 6D6I; 6FGA; 6GUM; 6GV3; 6IF1; 6JKY; 6KFP; 6KG6; 6KL4; 6NYA; 6NYD; 6OP8; 6Q83; 6QH3; 6QHK; 6R75; 6TTU; 6W7Z; 6W9A; 6XXU; 7BXG » more |
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission