Home  |  Contact
Entry: PS00185

General information about the entry

Entry name [info] IPNS_1
Accession [info] PS00185
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-APR-1990 DATA UPDATE;
22-APR-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00165

Name and characterization of the entry

Description [info] Isopenicillin N synthase signature 1.
Pattern [info] 
[RK]-x-[STA]-x(2)-S-x-C-Y-[SL].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_02 which contains 562'253 sequence entries.


Total number of hits 19 in 19 different sequences
Number of true positive hits 12 in 12 different sequences
Number of 'unknown' hits 0
Number of false positive hits 7 in 7 different sequences
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 63.16 %
Recall (true positives / (true positives + false negatives)) 85.71 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site(?) at position 7
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 12 sequences 

EXPA_ACRCH  (P11935    ), IPNS_ACRCH  (P05189    ), IPNS_AMYLA  (P27744    ), 

IPNS_EMENI  (P05326    ), IPNS_FLASS  (P16020    ), IPNS_LYSLA  (Q48739    ), 
IPNS_PENCH  (P08703    ), IPNS_STRCL  (P10621    ), IPNS_STRCT  (Q53932    ), 
IPNS_STRGR  (Q54243    ), IPNS_STRJU  (P18286    ), IPNS_STRMI  (P12438    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

CEFE_AMYLA  (Q03047    ), CEFE_STRCL  (P18548    )


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			7 sequences
			


			
HYAS1_HUMAN (Q92839    ), HYAS1_MOUSE (Q61647    ), NT56_DROVI  (Q24332    ), 

			
PMIP_MALGO  (A8QB25    ), RIR1_CHLMU  (Q9PL93    ), RIR1_CHLPN  (Q9Z6S5    ), 
RIR1_CHLTR  (O84834    )


			
			» more
			


				
	

	

		PDB
[Detailed view]		
		
			39 PDB
			


			1BK0; 1BLZ; 1HB1; 1HB2; 1HB3; 1HB4; 1IPS; 1OBN; 1OC1; 1ODM; 1ODN; 1QIQ; 
			
				1QJE; 1QJF; 1UZW; 1W03; 1W04; 1W05; 1W06; 1W3V; 1W3X; 2BJS; 2BU9; 2IVI; 
				2IVJ; 2JB4; 2VAU; 2VBB; 2VBD; 2VBP; 2VCM; 2VE1; 2WO7; 2Y60; 2Y6F; 3ZKU; 
				3ZKY; 3ZOI; 4BB3
			
			

			» more

				
	





View entry in original PROSITE format


View entry in raw text format (no links)


Direct ScanProsite submission