PROSITE entry PS00185

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] IPNS_1
Accession [info] PS00185
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
PROSITE Doc. [info] PDOC00165

Name and characterization of the entry

Description [info] Isopenicillin N synthase signature 1.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.

Total number of hits 22 in 22 different sequences
Number of true positive hits 13 in 13 different sequences
Number of 'unknown' hits 0
Number of false positive hits 9 in 9 different sequences
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 59.09 %
Recall (true positives / (true positives + false negatives)) 86.67 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site(?) at position 7
Version [info] 1

Cross-references [info]

True positive sequences
13 sequences

EXPA_HAPCH  (P11935), IPNA_EMENI  (P05326), IPNA_HAPCH  (P05189), 
IPNA_PENCH  (P08703), IPNA_PENRW  (B6HLU0), IPNS_AMYLA  (P27744), 
IPNS_FLASS  (P16020), IPNS_LYSLA  (Q48739), IPNS_STRCL  (P10621), 
IPNS_STRCT  (Q53932), IPNS_STRGR  (Q54243), IPNS_STRJU  (P18286), 
IPNS_STRMI  (P12438)
» more

False negative sequences
2 sequences

CEFE_AMYLA  (Q03047), CEFE_STRCL  (P18548)

False positive sequences
9 sequences

HYAS1_HUMAN (Q92839), HYAS1_MOUSE (Q61647), LUC8_FUSSX  (A0A6J4B484), 
NT56_DROVI  (Q24332), PMIP_MALGO  (A8QB25), RIR1_CHLMU  (Q9PL93), 
RIR1_CHLPN  (Q9Z6S5), RIR1_CHLTR  (O84834), ZHP2_CAEEL  (Q9U3L0)
» more

[Detailed view]
60 PDB

1BK0; 1BLZ; 1HB1; 1HB2; 1HB3; 1HB4; 1IPS; 1OBN; 1OC1; 1ODM; 1ODN; 1QIQ; 1QJE; 1QJF; 1UZW; 1W03; 1W04; 1W05; 1W06; 1W3V; 1W3X; 2BJS; 2BU9; 2IVI; 2IVJ; 2JB4; 2VAU; 2VBB; 2VBD; 2VBP; 2VCM; 2VE1; 2WO7; 2Y60; 2Y6F; 3ZKU; 3ZKY; 3ZOI; 4BB3; 6Y0O; 6Y0P; 6ZAE; 6ZAF; 6ZAG; 6ZAH; 6ZAI; 6ZAJ; 6ZAK; 6ZAL; 6ZAM; 6ZAN; 6ZAO; 6ZAP; 6ZAQ; 6ZW8; 7P3L; 7POY; 7PSW; 7ZOE; 8A4G
» more