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| Entry: PS00188 |
General information about the entry
| Entry name [info] | BIOTIN |
| Accession [info] | PS00188 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-DEC-2001 DATA UPDATE; 22-FEB-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00167 |
Name and characterization of the entry
| Description [info] | Biotin-requiring enzymes attachment site. |
| Pattern [info] |
[GDN]-[DEQTR]-x-[LIVMFY]-x(2)-[LIVM]-x-[AIV]-M-K-[LVMAT]-x(3)-[LIVM]-x- [SAV]. |
Numerical results [info]
| Total number of hits | 81 in 81 different sequences |
| Number of true positive hits | 81 in 81 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 13 |
| Number of 'partial' sequences | 1 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 86.17 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Site [info] | biotin at position 10 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
81 sequences
2OCL_HYDTT (D3DJ41 ), ACACA_BOVIN (Q9TTS3 ), ACACA_HUMAN (Q13085 ), ACACA_MOUSE (Q5SWU9 ), ACACA_RAT (P11497 ), ACACA_SHEEP (Q28559 ), ACAC_CHICK (P11029 ), ACAC_DICDI (Q54J08 ), ACAC_SCHPO (P78820 ), ACAC_YEAST (Q00955 ), ACC1_ARATH (Q38970 ), ACC2_ARATH (F4I1L3 ), ACCA1_MYCBO (P0A509 ), ACCA1_MYCTO (P9WPQ2 ), ACCA1_MYCTU (P9WPQ3 ), ACCA3_MYCLE (P46392 ), ACCA3_MYCTU (P96890 ), BCCP1_ARATH (Q42533 ), BCCP2_ARATH (Q9LLC1 ), BCCP_BACSU (P49786 ), BCCP_CHLMU (Q9PKR5 ), BCCP_CHLPN (Q9Z901 ), BCCP_CHLTR (O84125 ), BCCP_CYACA (O19918 ), BCCP_ECO57 (P0ABE0 ), BCCP_ECOL6 (P0ABD9 ), BCCP_ECOLI (P0ABD8 ), BCCP_HAEIN (P43874 ), BCCP_NEOYE (Q1XDK5 ), BCCP_NOSS1 (Q06881 ), BCCP_PORPU (P51283 ), BCCP_PROFR (P02904 ), BCCP_PSEAE (P37799 ), BCCP_SHIFL (P0ABE1 ), BCCP_SOLLC (P05115 ), BCCP_SOYBN (Q42783 ), BCCP_STRMU (P29337 ), BCCP_STRP6 (Q5XAE6 ), DCOA_KLEPN (P13187 ), DCOA_SALTI (Q8XGX8 ), DCOA_SALTY (Q03030 ), DMXL1_CRYX8 (A0A4P8DJE6), DUR1_LACKL (A5H0J2 ), DUR1_YEAST (P32528 ), GCDC_ACIFV (Q9ZAA7 ), HFA1_YEAS1 (B3LM95 ), HFA1_YEAS2 (C7GRE4 ), HFA1_YEAS7 (A6ZMR9 ), HFA1_YEAS8 (C8ZF72 ), HFA1_YEAST (P32874 ), LAMA_EMENI (P38095 ), MCCA_ARATH (Q42523 ), MCCA_DICDI (Q54KE6 ), MCCA_HUMAN (Q96RQ3 ), MCCA_MOUSE (Q99MR8 ), MCCA_ORYSJ (Q2QMG2 ), MCCA_RAT (Q5I0C3 ), MCCA_SOYBN (Q42777 ), MMDC_PROMO (O54030 ), MMDC_VEIPA (Q57111 ), PCCA_CAEBR (Q612F5 ), PCCA_CAEEL (Q19842 ), PCCA_HALMT (I3R7G3 ), PCCA_HUMAN (P05165 ), PCCA_MOUSE (Q91ZA3 ), PCCA_PIG (P0DTA4 ), PCCA_RAT (P14882 ), PCCA_RUEPO (Q5LUF3 ), PYC1_YEAST (P11154 ), PYC2_YEAST (P32327 ), PYCB_METJA (Q58628 ), PYC_ASPNG (Q9HES8 ), PYC_ASPTE (O93918 ), PYC_ASPTN (Q0CLK1 ), PYC_BOVIN (Q29RK2 ), PYC_HUMAN (P11498 ), PYC_MOUSE (Q05920 ), PYC_PICAN (Q8X1T3 ), PYC_PICPA (P78992 ), PYC_RAT (P52873 ), PYC_SCHPO (Q9UUE1 )» more
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| UniProtKB/Swiss-Prot False negative sequences |
13 sequences
ACACB_HUMAN (O00763 ), ACC1_ORYSJ (Q8S6N5 ), ACC2_ORYSJ (B9FK36 ), BLAP_BACSU (C0H419 ), BTB7_MYCBO (P0A511 ), BTB7_MYCLE (Q9CCH9 ), BTB7_MYCS2 (Q9XCD6 ), BTB7_MYCTO (P9WPQ0 ), BTB7_MYCTU (P9WPQ1 ), MADF_MALRU (O06930 ), PYC1_CAEEL (O17732 ), PYCB_METTH (O27179 ), PYC_BACSU (Q9KWU4 )» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
PCCA_MYXXA (P81185 ) |
| PDB [Detailed view] |
26 PDB
1A6X; 1BDO; 1DCZ; 1DD2; 1O78; 2BDO; 2EJM; 2JKU; 3BDO; 3BG3; 3BG9; 3N6R; 4HR7; 5CSA; 5CSK; 5CSL; 5MLK; 6G2D; 6G2H; 6G2I; 6ROJ; 7WTA; 7WTB; 7WTC; 7WTD; 7WTE » more |
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