PROSITE entry PS00188
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General information about the entry
Entry name [info] | BIOTIN |
Accession [info] | PS00188 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-DEC-2001 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00167 |
Name and characterization of the entry
Description [info] | Biotin-requiring enzymes attachment site. |
Pattern [info] |
[GDN]-[DEQTR]-x-[LIVMFY]-x(2)-[LIVM]-x-[AIV]-M-K-[LVMAT]-x(3)-[LIVM]-x- [SAV]. |
Numerical results [info]
Total number of hits | 81 in 81 different sequences |
Number of true positive hits | 81 in 81 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 13 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 86.17 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Site [info] | biotin at position 10 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
81 sequences
2OCL_HYDTT (D3DJ41), ACACA_BOVIN (Q9TTS3), ACACA_HUMAN (Q13085), ACACA_MOUSE (Q5SWU9), ACACA_RAT (P11497), ACACA_SHEEP (Q28559), ACAC_CHICK (P11029), ACAC_DICDI (Q54J08), ACAC_SCHPO (P78820), ACAC_YEAST (Q00955), ACC1_ARATH (Q38970), ACC2_ARATH (F4I1L3), ACCA1_MYCBO (P0A509), ACCA1_MYCTO (P9WPQ2), ACCA1_MYCTU (P9WPQ3), ACCA3_MYCLE (P46392), ACCA3_MYCTU (P96890), BCCP1_ARATH (Q42533), BCCP2_ARATH (Q9LLC1), BCCP_BACSU (P49786), BCCP_CHLMU (Q9PKR5), BCCP_CHLPN (Q9Z901), BCCP_CHLTR (O84125), BCCP_CYACA (O19918), BCCP_ECO57 (P0ABE0), BCCP_ECOL6 (P0ABD9), BCCP_ECOLI (P0ABD8), BCCP_HAEIN (P43874), BCCP_NEOYE (Q1XDK5), BCCP_NOSS1 (Q06881), BCCP_PORPU (P51283), BCCP_PROFR (P02904), BCCP_PSEAE (P37799), BCCP_SHIFL (P0ABE1), BCCP_SOLLC (P05115), BCCP_SOYBN (Q42783), BCCP_STRMU (P29337), BCCP_STRP6 (Q5XAE6), DCOA_KLEPN (P13187), DCOA_SALTI (Q8XGX8), DCOA_SALTY (Q03030), DMXL1_CRYX8 (A0A4P8DJE6), DUR1_LACKL (A5H0J2), DUR1_YEAST (P32528), GCDC_ACIFV (Q9ZAA7), HFA1_YEAS1 (B3LM95), HFA1_YEAS2 (C7GRE4), HFA1_YEAS7 (A6ZMR9), HFA1_YEAS8 (C8ZF72), HFA1_YEAST (P32874), LAMA_EMENI (P38095), MCCA_ARATH (Q42523), MCCA_DICDI (Q54KE6), MCCA_HUMAN (Q96RQ3), MCCA_MOUSE (Q99MR8), MCCA_ORYSJ (Q2QMG2), MCCA_RAT(Q5I0C3), MCCA_SOYBN (Q42777), MMDC_PROMO (O54030), MMDC_VEIPA (Q57111), PCCA_CAEBR (Q612F5), PCCA_CAEEL (Q19842), PCCA_HALMT (I3R7G3), PCCA_HUMAN (P05165), PCCA_MOUSE (Q91ZA3), PCCA_PIG(P0DTA4), PCCA_RAT(P14882), PCCA_RUEPO (Q5LUF3), PYC1_YEAST (P11154), PYC2_YEAST (P32327), PYCB_METJA (Q58628), PYC_ASPNG (Q9HES8), PYC_ASPTE (O93918), PYC_ASPTN (Q0CLK1), PYC_BOVIN (Q29RK2), PYC_HUMAN (P11498), PYC_MOUSE (Q05920), PYC_PICAN (Q8X1T3), PYC_PICPA (P78992), PYC_RAT (P52873), PYC_SCHPO (Q9UUE1)» more
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UniProtKB/Swiss-Prot False negative sequences |
13 sequences
ACACB_HUMAN (O00763), ACC1_ORYSJ (Q8S6N5), ACC2_ORYSJ (B9FK36), BLAP_BACSU (C0H419), BTB7_MYCBO (P0A511), BTB7_MYCLE (Q9CCH9), BTB7_MYCS2 (Q9XCD6), BTB7_MYCTO (P9WPQ0), BTB7_MYCTU (P9WPQ1), MADF_MALRU (O06930), PYC1_CAEEL (O17732), PYCB_METTH (O27179), PYC_BACSU (Q9KWU4)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
PCCA_MYXXA (P81185) |
PDB [Detailed view] |
27 PDB
1A6X; 1BDO; 1DCZ; 1DD2; 1O78; 2BDO; 2EJM; 2JKU; 3BDO; 3BG3; 3BG9; 3N6R; 4HR7; 5CSA; 5CSK; 5CSL; 5MLK; 6G2D; 6G2H; 6G2I; 6ROJ; 7WTA; 7WTB; 7WTC; 7WTD; 7WTE; 7YBU » more |