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Entry: PS00191

General information about the entry

Entry name [info] CYTOCHROME_B5_1
Accession [info] PS00191
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE;
22-FEB-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00170

Name and characterization of the entry

Description [info] Cytochrome b5 family, heme-binding domain signature.
Pattern [info] 
[FY]-[LIVMK]-{I}-{Q}-H-P-[GA]-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_01 which contains 569'213 sequence entries.


Total number of hits 126 in 126 different sequences
Number of true positive hits 105 in 105 different sequences
Number of 'unknown' hits 0
Number of false positive hits 21 in 21 different sequences
Number of false negative sequences 79
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 83.33 %
Recall (true positives / (true positives + false negatives)) 57.07 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Site [info] heme_iron at position 5
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 105 sequences 

ACO1_AJECA  (Q12618    ), ACO1_YEAST  (P21147    ), CYB2_TALSN  (B8MKR3    ), 

CYB2_WICAO  (P09437    ), CYB2_YEAST  (P00175    ), CYB52_SCHPO (Q9USM6    ), 
CYB5A_ARATH (Q9FDW8    ), CYB5B_ARATH (O48845    ), CYB5B_HUMAN (O43169    ), 
CYB5B_MOUSE (Q9CQX2    ), CYB5B_PONAB (Q5RDJ5    ), CYB5B_RAT   (P04166    ), 
CYB5C_ARATH (Q9ZNV4    ), CYB5D_ARATH (Q9ZWT2    ), CYB5E_ARATH (Q42342    ), 
CYB5L_MIMIV (Q5UR80    ), CYB5L_NEUCR (Q8X0J4    ), CYB5R_DROME (P19967    ), 
CYB5R_DROVI (P50266    ), CYB5S_TOBAC (P49099    ), CYB5_ALOSE  (P00168    ), 
CYB5_BOROF  (O04354    ), CYB5_BOVIN  (P00171    ), CYB5_BRAOB  (P40934    ), 
CYB5_CANTR  (Q874I5    ), CYB5_CHICK  (P00174    ), CYB5_CUSRE  (P49097    ), 
CYB5_DROME  (Q9V4N3    ), CYB5_HORSE  (P00170    ), CYB5_HUMAN  (P00167    ), 
CYB5_MORAP  (Q9Y706    ), CYB5_MOUSE  (P56395    ), CYB5_MUSDO  (P49096    ), 
CYB5_NEUCR  (Q9P5L0    ), CYB5_ORYSJ  (P49100    ), CYB5_PHATC  (B7GCG7    ), 
CYB5_PIG    (P00172    ), CYB5_RABIT  (P00169    ), CYB5_RAT    (P00173    ), 
CYB5_RHIST  (Q9HFV1    ), CYB5_TOBAC  (P49098    ), CYB5_YEAST  (P40312    ), 
CYBL_RHOGR  (P32953    ), CYP5F_ARATH (O22704    ), D4FAD_CHLRE (I2CYZ4    ), 
D4FAD_EUGGR (Q6WNG7    ), D5FAD_MORAP (O74212    ), D5FAD_REBSA (A4KDP0    ), 
DESAT_THAPS (Q4G2T3    ), DES_CHLRE   (Q2HWK7    ), FA2H_HUMAN  (Q7L5A8    ), 
FA2H_MACFA  (Q4R4P4    ), FA2H_MOUSE  (Q5MPP0    ), FA2H_RAT    (Q2LAM0    ), 
FAD5C_DICDI (Q1ZXQ5    ), IRC21_YEAST (Q04772    ), NB5R4_BOVIN (Q32LH7    ), 
NB5R4_DANRE (Q502I6    ), NB5R4_HUMAN (Q7L1T6    ), NB5R4_MOUSE (Q3TDX8    ), 
NB5R4_RAT   (Q68EJ0    ), NB5R4_XENTR (Q28CZ9    ), NIA1_ARATH  (P11832    ), 
NIA1_BRANA  (P39867    ), NIA1_HORVU  (P27967    ), NIA1_MAIZE  (P17571    ), 
NIA1_ORYSJ  (P16081    ), NIA1_PHAVU  (P39865    ), NIA1_SOYBN  (P54233    ), 
NIA1_TOBAC  (P11605    ), NIA2_ARATH  (P11035    ), NIA2_BRANA  (P39868    ), 
NIA2_HORVU  (P27969    ), NIA2_PHAVU  (P39866    ), NIA2_SOYBN  (P39870    ), 
NIA2_TOBAC  (P08509    ), NIA3_MAIZE  (P49102    ), NIA7_HORVU  (P27968    ), 
NIA_ASPNG   (P36858    ), NIA_BEABA   (P43100    ), NIA_BETPN   (P27783    ), 
NIA_CHLVU   (Q01170    ), NIA_CICIN   (P43101    ), NIA_CUCMA   (P17569    ), 
NIA_EMENI   (P22945    ), NIA_FUSOX   (P39863    ), NIA_LEPMC   (P36842    ), 
NIA_LOTJA   (P39869    ), NIA_NEUCR   (P08619    ), NIA_PETHY   (P36859    ), 
NIA_PHYIN   (P39864    ), NIA_PICAN   (P49050    ), NIA_SOLLC   (P17570    ), 
NIA_SPIOL   (P23312    ), NIA_ULVPR   (A0A286R227), NIA_USTMA   (Q05531    ), 
NIA_VOLCA   (P36841    ), RLF_ARATH   (Q9LXD1    ), SCS7_YEAST  (Q03529    ), 
SUOX_CHICK  (P07850    ), SUOX_DROME  (Q9VWP4    ), SUOX_HUMAN  (P51687    ), 
SUOX_MOUSE  (Q8R086    ), SUOX_RAT    (Q07116    ), YDAA_SCHPO  (Q10352    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 79 sequences 

ACET6_CERPU (Q9LEN0    ), ACO1_SCHPO  (O94523    ), APF12_GIBF5 (S0DLN7    ), 

CB5D1_DANRE (Q567I9    ), CB5D1_HUMAN (Q6P9G0    ), CB5D1_MOUSE (Q5NCY3    ), 
CB5D1_PONAB (Q5R4Q5    ), CB5D1_XENLA (Q5PPR6    ), CB5D1_XENTR (Q0IHR1    ), 
CYB5_ECTSH  (P82291    ), D4FAD_DIALT (Q6VPV2    ), D4FAD_REBSA (A0PJ29    ), 
D4FAD_THRSP (Q8S3C0    ), D5FAD_PHYPA (A9SIZ6    ), D5FAD_THRSP (Q8S3C1    ), 
D8FAD_REBSA (A4KDP1    ), DAP1_SCHPO  (O13995    ), DAP1_YEAST  (Q12091    ), 
DES6_CERPU  (Q9LEM9    ), FAD5A_DICDI (Q9Y1W0    ), FAD5B_DICDI (O96099    ), 
FADS1_HUMAN (O60427    ), FADS1_MOUSE (Q920L1    ), FADS1_PAPAN (A4UVI1    ), 
FADS1_RAT   (Q920R3    ), FADS2_BOVIN (A4FV48    ), FADS2_DANRE (Q9DEX7    ), 
FADS2_HUMAN (O95864    ), FADS2_MACFA (Q4R749    ), FADS2_MOUSE (Q9Z0R9    ), 
FADS2_PONAB (Q5REA7    ), FADS2_RAT   (Q9Z122    ), FADS2_TACFU (A0A0C5PRW9), 
FADS3_HUMAN (Q9Y5Q0    ), FADS3_MOUSE (Q9JJE7    ), FADS3_RAT   (Q8K1P9    ), 
FAT3_CAEEL  (Q23221    ), FAT4_CAEEL  (G5EG11    ), HERC2_HUMAN (O95714    ), 
HERC2_MOUSE (Q4U2R1    ), MAPR4_ARATH (Q2HIW2    ), MSBP1_ARATH (Q9XFM6    ), 
MSBP1_ORYSJ (Q9FVZ7    ), MSBP2_ARATH (Q9M2Z4    ), MSBP2_ORYSJ (Q9FVZ9    ), 
NENF_BOVIN  (Q1JQA5    ), NENF_HUMAN  (Q9UMX5    ), NENF_MOUSE  (Q9CQ45    ), 
NENF_RAT    (Q6IUR5    ), NEUFC_CAEBR (Q60YT6    ), NEUFC_CAEEL (Q9XXA7    ), 
NEUFC_DANRE (A2CES0    ), NEUFC_DROME (Q9W376    ), NEUFC_DROPS (Q29HF1    ), 
NEUFC_HUMAN (Q8WUJ1    ), NEUFC_MOUSE (Q5SSH8    ), NEUFC_RAT   (Q6AY62    ), 
NEUFC_XENTR (Q28FI8    ), PGRC1_BOVIN (Q17QC0    ), PGRC1_CHICK (Q5ZKN2    ), 
PGRC1_HUMAN (O00264    ), PGRC1_MOUSE (O55022    ), PGRC1_PIG   (Q95250    ), 
PGRC1_PONAB (Q5RED0    ), PGRC1_RAT   (P70580    ), PGRC2_HUMAN (O15173    ), 
PGRC2_MOUSE (Q80UU9    ), PGRC2_RAT   (Q5XIU9    ), SBP3_ARATH  (Q9SK39    ), 
SLD1H_KLULC (Q8NKG8    ), SLD1_ARATH  (Q9ZRP7    ), SLD1_BOROF  (Q9FR82    ), 
SLD1_EUGGR  (Q9SWQ9    ), SLD1_HELAN  (Q43469    ), SLD1_KLULC  (Q6CMK7    ), 
SLD1_LACK1  (Q8NKG9    ), SLD2_ARATH  (Q3EBF7    ), SUOX_MACFA  (Q60HD0    ), 
VEM1_CAEEL  (Q7YZW5    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 2 sequences 

NIA2_MAIZE  (P39871    ), NIA_LOTTE   (P39882    )


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			21 sequences
			


			
CCD32_MOUSE (Q8BS39    ), CCD32_RAT   (Q561K4    ), CDK14_CALJA (B0VXE8    ), 

			
CDK14_DASNO (C0RW22    ), CDK14_HUMAN (O94921    ), CDK14_MOUSE (O35495    ), 
CDK14_PLEMO (B0VXL7    ), CDK14_RABIT (B6A7Q3    ), CDK14_XENLA (Q6DJM7    ), 
CDK14_XENTR (A4IIW7    ), HYAL3_PIG   (Q6RHW2    ), LAR1B_HUMAN (Q659C4    ), 
LARP1_HUMAN (Q6PKG0    ), LARP1_MOUSE (Q6ZQ58    ), MATK_WEDBI  (Q6JVN2    ), 
MSRAB_HELPJ (Q9ZMK8    ), PPCEL_XENLA (Q32N48    ), SFSA_METS4  (B0ULY8    ), 
VCLY_TEGPF  (P07447    ), VILI_BOVIN  (Q3SZP7    ), VILL_HUMAN  (O15195    )


			
			» more
			


				
	

	

		PDB
[Detailed view]		
		
			70 PDB
			


			1AQA; 1AW3; 1AWP; 1AXX; 1B5A; 1B5B; 1B5M; 1BFX; 1BLV; 1CYO; 1DO9; 1EHB; 
			
				1ES1; 1EUE; 1F03; 1F04; 1FCB; 1HKO; 1I5U; 1I87; 1I8C; 1IB7; 1ICC; 1IET; 
				1IEU; 1J0Q; 1JEX; 1KBI; 1LCO; 1LDC; 1LJ0; 1LQX; 1LR6; 1LTD; 1M20; 1M2I; 
				1M2M; 1MJ4; 1MNY; 1NX7; 1SH4; 1SOX; 1SZE; 1SZF; 1SZG; 1U9M; 1U9U; 2AXX; 
				2I89; 2I96; 2IBJ; 2M33; 2OZ0; 3HBG; 3HBP; 3HBQ; 3KS0; 3LF5; 3MUS; 3NER; 
				3OZZ; 3R18; 3R19; 3X32; 3X33; 3X34; 3X35; 4HIL; 4HIN; 4ZR0
			
			

			» more

				
	





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