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Entry: PS00196 |
Entry name [info] | COPPER_BLUE |
Accession [info] | PS00196 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00174 |
Description [info] | Type-1 copper (blue) proteins signature. |
Pattern [info] |
[GA]-x(0,2)-[YSA]-x(0,1)-[VFY]-{SEDT}-C-x(1,2)-[PG]-x(0,1)-H-x(2,4)-[MQ]. |
Total number of hits | 166 in 165 different sequences |
Number of true positive hits | 90 in 90 different sequences |
Number of 'unknown' hits | 1 |
Number of false positive hits | 75 in 74 different sequences |
Number of false negative sequences | 13 |
Number of 'partial' sequences | 2 |
Precision (true positives / (true positives + false positives)) | 54.55 % |
Recall (true positives / (true positives + false negatives)) | 87.38 % |
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 2 |
Site [info] | copper at position 7 |
Site [info] | copper at position 11 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
90 sequences
AMCY_METEA (P04172 ), AMCY_PARDE (P22364 ), AMCY_PARVE (P22365 ), AURA_CHLAA (Q8RMH6 ), AURB_CHLAA (P27197 ), AZUP_ACHCY (P19567 ), AZUP_ALCFA (P04377 ), AZUP_METEA (P04171 ), AZUP_PARDE (P80649 ), AZUP_PARPN (P80401 ), AZUR1_ALCXX (P56547 ), AZUR1_METJ (P12334 ), AZUR2_ALCXX (P56275 ), AZUR2_METJ (P12335 ), AZUR_ACHDE (P00280 ), AZUR_ALCFA (P00281 ), AZUR_ALCSP (P00279 ), AZUR_BORBR (P0A321 ), AZUR_BORPA (P0A322 ), AZUR_BORPE (P0A320 ), AZUR_PSEAE (P00282 ), AZUR_PSECL (P00286 ), AZUR_PSEDE (P00283 ), AZUR_PSEFA (P80546 ), AZUR_PSEFB (P00284 ), AZUR_PSEFC (P00285 ), AZUR_PSEPU (P34097 ), BABL_CUCSA (P00303 ), BCB1_ARATH (Q07488 ), BCP_PEA (Q41001 ), CPC_CUCSA (P29602 ), H81_NEIGO (P07211 ), H8_NEIMA (P57025 ), H8_NEIMB (P57026 ), H8_NEIMF (P07212 ), HCY_NATPH (P39442 ), MAVI_CUCPE (P80728 ), PLAS1_ARATH (P11490 ), PLAS1_POPNI (P00299 ), PLAS1_TOBAC (P35476 ), PLAS2_ARATH (P42699 ), PLAS2_POPNI (P11970 ), PLAS2_TOBAC (P35477 ), PLAS_ANAVA (P0C178 ), PLAS_CAPBU (P00294 ), PLAS_CHLRE (P18068 ), PLAS_CUCPE (P00292 ), PLAS_CUCSA (P00293 ), PLAS_DAUCA (P20422 ), PLAS_DRYCA (Q7SIB8 ), PLAS_GINBI (P84338 ), PLAS_GLOC7 (B7KAE8 ), PLAS_HORVU (P08248 ), PLAS_LACSA (P00290 ), PLAS_MERPE (P00295 ), PLAS_NOSP7 (B2IVD7 ), PLAS_NOSS1 (P46444 ), PLAS_NOSSO (O52830 ), PLAS_ORYSI (A2Y886 ), PLAS_ORYSJ (Q0DFC9 ), PLAS_PEA (P16002 ), PLAS_PETCR (P17341 ), PLAS_PHAVU (P00287 ), PLAS_PHOLA (Q51883 ), PLAS_PHYPA (Q9SXW9 ), PLAS_PROHO (P50057 ), PLAS_RUMOB (P00298 ), PLAS_SAMNI (P00291 ), PLAS_SCEFU (P00300 ), PLAS_SILLB (P07030 ), PLAS_SOLCR (P00297 ), PLAS_SOLLC (P17340 ), PLAS_SOLTU (P00296 ), PLAS_SPIOL (P00289 ), PLAS_SYNE7 (P55020 ), PLAS_SYNJB (Q2JHE1 ), PLAS_SYNP6 (Q5N4W8 ), PLAS_SYNY3 (P21697 ), PLAS_TETOB (P26956 ), PLAS_TRIV2 (Q3M9H8 ), PLAS_ULVAR (P13133 ), PLAS_ULVPE (P56274 ), PLAS_ULVPR (P07465 ), PLAS_VICFA (P00288 ), RUS1_ACIFR (P23742 ), RUS2_ACIFR (P0C918 ), RUS_ACIF2 (B7JAQ0 ), STEL_TOXVR (P00302 ), UCC1_ARATH (O82081 ), UMEC_ARMRU (P42849 )» more
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UniProtKB/Swiss-Prot False negative sequences |
13 sequences
AZUP_RHILV (Q52825 ), AZUR_METFK (Q50400 ), BABL_ARATH (Q8LG89 ), BABL_LILLO (P60496 ), BCB2_ARATH (O80517 ), BCB3_ARATH (Q96316 ), BCP1A_MEDTR (G7L0H3 ), BCP1B_MEDTR (A0A072U307), BCP_PETHY (A0A0M4FTF3), CUPR1_ARTBC (P0DN32 ), MPAA3_AMBEL (P00304 ), NO552_SOYBN (Q02917 ), PLAS_FRIAG (O22646 )» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
PLAS_MICAE (P10625 ), PLAS_THAOC (P84800 ) |
UniProtKB/Swiss-Prot 'Unknown' sequences |
1 sequence
GABR2_CAEEL (G5ECB2 ) |
UniProtKB/Swiss-Prot False positive sequences |
74 sequences
4FTAS_STRCT (B6VP39 ), APOH_BOVIN (P17690 ), ARGD_RALSO (Q8XWN8 ), CCD14_HUMAN (Q49A88 ), CD59_PAPSP (Q28785 ), CEPL_CERFI (P81702 ), DIG1_CAEEL (Q09165 ), DYH3_MOUSE (Q8BW94 ), EF121_ARATH (Q9FGC9 ), EPHA3_DANRE (O13146 ), F215A_HUMAN (Q9Y5M1 ), FGFH_NPVOP (O10284 ), GLGB_MAIZE (Q08047 ), GPR33_HUMAN (Q49SQ1 ), GPR33_PANPA (Q49SQ2 ), GPR33_PANTR (Q49SQ3 ), ILVC_STAHJ (Q4L7T9 ), IOLC_PHOPR (Q6LK43 ), LRP2_PIG (C0HL13 ), LSS_MOUSE (Q8BLN5 ), LSS_RAT (P48450 ), LTP_HCMVA (P16785 ), LTP_HCMVM (Q6SW84 ), LTP_HCMVT (D5LX59 ), LYST_BOVIN (Q9TTK4 ), LYST_HUMAN (Q99698 ), LYSX_MYCA1 (A0QHC4 ), LYSX_MYCPA (Q740J9 ), MUC2_MOUSE (Q80Z19 ), NR1H3_BOVIN (Q5E9B6 ), NR1H3_HUMAN (Q13133 ), NR1H3_MOUSE (Q9Z0Y9 ), NR1H3_RAT (Q62685 ), NTPPB_PHOPR (Q6LSX6 ), NTR2_MOUSE (P70310 ), NTR2_RAT (Q63384 ), PFL5_SCHPO (Q9URU4 ), QUEF_NOVAD (Q2G586 ), RL36_THET2 (Q72I28 ), RL36_THET8 (Q5SHR2 ), RL36_THETH (P80256 ), RL36_TROW8 (Q83I57 ), RL36_TROWT (Q83G08 ), S35B2_HUMAN (Q8TB61 ), S35B2_PONAB (Q5R9A1 ), SORL_CHICK (Q98930 ), SORL_HUMAN (Q92673 ), SORL_MOUSE (O88307 ), SORL_RABIT (Q95209 ), SORL_RAT (P0DSP1 ), STA5A_MOUSE (P42230 ), SYI_PHOPR (Q6LUL1 ), THIC_RHOPB (Q216H0 ), TOP3_STAA3 (Q2FEN5 ), TOP3_STAA8 (Q2FW03 ), TOP3_STAAB (P0C2W6 ), TOP3_STAAC (Q5HDV4 ), TOP3_STAAM (Q99S17 ), TOP3_STAAN (Q7A455 ), TOP3_STAAR (Q6GEH9 ), TOP3_STAAS (Q6G767 ), TOP3_STAAW (Q7A075 ), TOP3_STAEQ (Q5HLZ4 ), TOP3_STAES (Q8CRF7 ), TOP3_STAHJ (Q4L8B8 ), TOP3_STAS1 (Q49ZH2 ), TRRAP_HUMAN (Q9Y4A5 ), TRRAP_MOUSE (Q80YV3 ), U507_LODEL (A5DUP0 ), VPS54_CAEBR (Q61JT8 ), VPS54_CAEEL (Q22639 ), XKR8_MOUSE (Q8C0T0 ), Y2934_KINRD (A6WC59 ), Y6211_BACAN (Q9X397 )» more |
PDB [Detailed view] |
221 PDB
1A3Z; 1A4A; 1A4B; 1A4C; 1A8Z; 1AAC; 1AAJ; 1AAN; 1ADW; 1AG6; 1AIZ; 1AZB; 1AZC; 1AZN; 1AZR; 1AZU; 1B3I; 1BAW; 1BEX; 1BQK; 1BQR; 1BXA; 1BXU; 1BXV; 1BYO; 1BYP; 1CUO; 1CUR; 1DYZ; 1DZ0; 1E30; 1E5Y; 1E5Z; 1E65; 1E67; 1EZL; 1FA4; 1GR7; 1GY1; 1I53; 1ID2; 1ILS; 1IUZ; 1J5C; 1J5D; 1JER; 1JOI; 1JVL; 1JVO; 1JXD; 1JXF; 1JXG; 1JZE; 1JZF; 1JZG; 1JZH; 1JZI; 1JZJ; 1KDI; 1KDJ; 1M9W; 1MDA; 1MG2; 1MG3; 1NIN; 1NWO; 1NWP; 1NZR; 1OOW; 1OV8; 1PAZ; 1PCS; 1PLA; 1PLB; 1PLC; 1PMY; 1PNC; 1PND; 1PY0; 1PZA; 1PZB; 1PZC; 1QHQ; 1RCY; 1RKR; 1T5K; 1TEF; 1TEG; 1TKW; 1TU2; 1UAT; 1URI; 1VLX; 1WS7; 1WS8; 1X9R; 1X9U; 1XB3; 1XB6; 1XB8; 1YLB; 1ZIA; 1ZIB; 2AAN; 2AZA; 2AZU; 2B3I; 2BZ7; 2BZC; 2CAK; 2CBP; 2CCW; 2CJ3; 2FNW; 2FTA; 2GB2; 2GBA; 2GC4; 2GC7; 2GHZ; 2GI0; 2GIM; 2H3X; 2H47; 2HX7; 2HX8; 2HX9; 2HXA; 2I7O; 2I7S; 2IAA; 2IDF; 2IDT; 2IDU; 2J55; 2J56; 2J57; 2JKW; 2JXM; 2MTA; 2OJ1; 2OV0; 2P80; 2PCF; 2PCY; 2PLT; 2Q5B; 2QDV; 2QDW; 2RAC; 2UX6; 2UX7; 2UXF; 2UXG; 2W88; 2W8C; 3AZU; 3BQV; 3C75; 3CVB; 3CVC; 3CVD; 3ERX; 3IBO; 3IN0; 3JTB; 3L45; 3NYK; 3PAZ; 3PCY; 3PLY; 3UGE; 4AZU; 4BWT; 4BWU; 4BWW; 4BXV; 4DP0; 4DP1; 4DP2; 4DP4; 4DP5; 4DP6; 4DP7; 4DP8; 4DP9; 4DPA; 4DPB; 4DPC; 4HZ1; 4JKN; 4KO7; 4KOB; 4P5R; 4P5S; 4PCY; 4R0O; 4RH4; 4YL4; 5AZU; 5I26; 5I28; 5PCY; 5SYD; 5WV4; 5X31; 5XMO; 5Y23; 5YSG; 5YW3; 5Z0X; 5ZTD; 6AKN; 6GYI; 6IAV; 6IFP; 6L1V; 6PCY; 7PCY; 8PAZ; 9PCY » more |