PROSITE entry PS00205
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General information about the entry
Entry name [info] | TRANSFERRIN_LIKE_1 |
Accession [info] | PS00205 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-JUN-1994 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00182 |
Name and characterization of the entry
Description [info] | Transferrin-like domain signature 1. |
Pattern [info] |
Y-x(0,1)-[VAS]-V-[IVAC]-[IVA]-[IVA]-[RKH]-[RKS]-[GDENSA]. |
Numerical results [info]
Total number of hits | 70 in 42 different sequences |
Number of true positive hits | 62 in 34 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 8 in 8 different sequences |
Number of false negative sequences | 2 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 88.57 % |
Recall (true positives / (true positives + false negatives)) | 96.88 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 2 |
Site [info] | iron at position 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
34 sequences
ICA_MOUSE (Q9DBD0 ), ICA_PIG (Q29545 ), TRFE1_SALSA (P80426 ), TRFE2_SALSA (P80429 ), TRFEA_XENLA (P20233 ), TRFEB_XENLA (Q6PGT3 ), TRFE_ANAPL (P56410 ), TRFE_BOVIN (Q29443 ), TRFE_CHICK (P02789 ), TRFE_GADMO (Q92079 ), TRFE_HORSE (P27425 ), TRFE_HUMAN (P02787 ), TRFE_MOUSE (Q921I1 ), TRFE_ONCKI (P79815 ), TRFE_ORYLA (P79819 ), TRFE_PANTR (A5A6I6 ), TRFE_PAROL (O93429 ), TRFE_PIG (P09571 ), TRFE_RABIT (P19134 ), TRFE_RAT (P12346 ), TRFE_XENTR (Q501K5 ), TRFL_BOVIN (P24627 ), TRFL_BUBBU (O77698 ), TRFL_CAMDR (Q9TUM0 ), TRFL_CAPHI (Q29477 ), TRFL_HORSE (O77811 ), TRFL_HUMAN (P02788 ), TRFL_MOUSE (P08071 ), TRFL_PIG (P14632 ), TRFM_HUMAN (P08582 ), TRFM_MOUSE (Q9R0R1 ), TRFM_RABIT (O97490 ), TRF_BLADI (Q02942 ), TRF_MANSE (P22297 )» more
|
UniProtKB/Swiss-Prot False negative sequences |
2 sequences
MYP_STRPU (P19615 ), TRF_SARPE (Q26643 ) |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
TRFE_DRONO (P85895 ) |
UniProtKB/Swiss-Prot False positive sequences |
8 sequences
BIOD_YEAST (P53630 ), BIOF_ARATH (Q8GW43 ), HYALP_CAVPO (P23613 ), MURB_BORBR (Q7WGH4 ), MURB_BORPA (Q7W509 ), MURB_BORPE (Q9X6Y8 ), RSH6A_HUMAN (Q9H0K4 ), RSH6A_MOUSE (Q8CDR2 )» more |
PDB [Detailed view] |
189 PDB
1A8E; 1A8F; 1AIV; 1AOV; 1B0L; 1B1X; 1B3E; 1B7U; 1B7Z; 1BIY; 1BKA; 1BLF; 1BP5; 1BTJ; 1CB6; 1CE2; 1D3K; 1D4N; 1DOT; 1DSN; 1DTG; 1DTZ; 1EH3; 1F9B; 1FCK; 1FQE; 1FQF; 1GV8; 1GVC; 1H43; 1H44; 1H45; 1H76; 1HSE; 1I6B; 1I6Q; 1IEJ; 1IQ7; 1JNF; 1JQF; 1JW1; 1L5T; 1LCF; 1LCT; 1LFG; 1LFH; 1LFI; 1LGB; 1N04; 1N76; 1N7W; 1N7X; 1N84; 1NFT; 1NKX; 1NNT; 1OQG; 1OQH; 1OVB; 1OVT; 1QJM; 1RYO; 1RYX; 1SDX; 1SQY; 1SUV; 1TFA; 1VFD; 1VFE; 2ALU; 2AYS; 2B65; 2BJJ; 2D3I; 2DOJ; 2DP8; 2DQV; 2DS9; 2DSF; 2DVC; 2DWA; 2DWH; 2DWI; 2DWJ; 2DXR; 2DXY; 2DYX; 2E0S; 2E1S; 2FA7; 2G93; 2H4I; 2HAU; 2HAV; 2HCA; 2NUV; 2NWJ; 2O1L; 2O51; 2O7U; 2O84; 2OCU; 2P1S; 2PMS; 2PX1; 2Q8J; 2QJE; 2R71; 2R9J; 2ZMB; 3CFL; 3CI8; 3CR9; 3CRB; 3E9X; 3FGS; 3IAZ; 3IB0; 3IB1; 3IB2; 3K0V; 3KJ7; 3MC2; 3MJN; 3O97; 3QYT; 3RGY; 3S9L; 3S9M; 3S9N; 3SDF; 3SKP; 3TAJ; 3TOD; 3TTR; 3TUS; 3U72; 3U8Q; 3UGW; 3UK4; 3USD; 3V5A; 3V83; 3V89; 3V8X; 3VDF; 3VE1; 4DIG; 4DXU; 4FIM; 4FJP; 4FOR; 4G2Z; 4G77; 4G8H; 4GRK; 4H0W; 4N6P; 4NED; 4OQO; 4X1B; 4X1D; 5CRY; 5DYH; 5H52; 5HBC; 5WTD; 5X5P; 5Y6K; 6CTC; 6D03; 6D04; 6D05; 6JAS; 6SOY; 6SOZ; 6UJ6; 6WB6; 6XR0; 7ENU; 7EQU; 7EV0; 7EVQ; 7FDW; 7FFM; 7FFU; 7JRD; 7N88; 7Q1L » more |