PROSITE entry PS00208
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General information about the entry
Entry name [info] | PLANT_GLOBIN |
Accession [info] | PS00208 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-DEC-2001 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00183 |
Name and characterization of the entry
Description [info] | Plant hemoglobins signature. |
Pattern [info] |
[SN]-P-x-[LV]-x(2)-H-A-x(3)-F. |
Numerical results [info]
Total number of hits | 57 in 57 different sequences |
Number of true positive hits | 47 in 47 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 10 in 10 different sequences |
Number of false negative sequences | 1 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 82.46 % |
Recall (true positives / (true positives + false negatives)) | 97.92 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Site [info] | heme_iron at position 6 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
47 sequences
HBL0_PHYPA (Q9M630), HBL1_ARATH (O24520), HBL1_ORYSJ (O04986), HBL2_ARATH (O24521), HBL2_BRANA (Q941Q2), HBL2_GOSHI (Q93Y92), HBL2_ORYSJ (O04985), HBL2_SOLLC (Q941P9), HBL3_ORYSJ (Q94FT8), HBL4_ORYSJ (Q94FT7), HBL_HORVU (Q42831), HBL_MAIZE (Q9FY42), HBL_TRETO (P07803), HBL_ZEAMP (Q9M593), HBP1_CASGL (P08054), HBP2_CASGL (P23244), HBPA_CASGL (Q42665), HBPL_PARAD (P68168), HBPL_PARRI (P68169), LGB1_LUPLU (P02239), LGB1_MEDSA (P09187), LGB1_MEDTR (P27992), LGB1_PEA(P02233), LGB1_SOYBN (P02235), LGB1_VICFA (P02232), LGB1_VIGUN (Q43236), LGB2_LUPLU (P02240), LGB2_MEDTR (P27993), LGB2_PEA(O48668), LGB2_PHAVU (O04939), LGB2_SESRO (P14848), LGB2_SOYBN (P02236), LGB2_VIGUN (Q43296), LGB3_MEDSA (P14962), LGB3_PEA(O80405), LGB3_SESRO (P10816), LGB3_SOYBN (P02237), LGB3_VICFA (P93849), LGB4_MEDSA (P28010), LGB4_PEA(Q9SAZ1), LGB5_PEA(O48665), LGB6_PEA(Q9SAZ0), LGBA_PHAVU (P02234), LGBA_SOYBN (P02238), LGB_CANLI (P42511), LGB_LOTJA (Q9FEP8), LGB_PSOTE (P27199)» more
|
UniProtKB/Swiss-Prot False negative sequences |
1 sequence
LGB2_VICFA (P93848) |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
HBL_PSEMZ (P85943) |
UniProtKB/Swiss-Prot False positive sequences |
10 sequences
BCP1_DEBHA (Q6BII5), F91A1_DANRE (Q6TEP1), F91A1_HUMAN (Q658Y4), F91A1_MOUSE (Q3UVG3), ISPG_CHLAB (Q5L669), POL_HTL32 (Q0R5R2), POL_HTL3P (Q4U0X6), PPK3_SCHPO (O13733), RPN1_ENCCU (Q8SS65), SEC2_YEAST (P17065)» more |
PDB [Detailed view] |
27 PDB
1BIN; 1D8U; 1FSL; 1GDI; 1GDJ; 1GDK; 1GDL; 1LH1; 1LH2; 1LH3; 1LH5; 1LH6; 1LH7; 2GDM; 2GNV; 2GNW; 2LH1; 2LH2; 2LH3; 2LH5; 2LH6; 2LH7; 2OIF; 2R50; 3QQQ; 3QQR; 3ZHW » more |