PROSITE entry PS00209

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General information about the entry

Entry name [info]	HEMOCYANIN_1
Accession [info]	PS00209
Entry type [info]	PATTERN
Date [info]	01-APR-1990 CREATED; 01-APR-1990 DATA UPDATE; 08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00184

Name and characterization of the entry

Description [info]	Arthropod hemocyanins / insect LSPs signature 1.
Pattern [info]	Y-[FYW]-x-E-D-[LIVM]-x(2)-N-x(6)-H-x(3)-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.

Total number of hits	39 in 39 different sequences
Number of true positive hits	39 in 39 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	13
Number of 'partial' sequences	32

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	75.00 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	1
Site [info]	copper at position 10
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	39 sequences ARYA_MANSE (P14296), ARYB_MANSE (P14297), ARY_ANTPE (Q7Z1F8), ARY_GALME (Q24995), BJSB1_TRINI (Q06342), BJSB2_TRINI (Q06343), HCY2_CARAE (P84293), HCY2_LIMPO (P04253), HCY6_ANDAU (P80476), HCYA_APHSP (P14750), HCYA_PANIN (P04254), HCYA_SCUCO (Q95P08), HCYB_APHSP (Q9NFH9), HCYB_ASTLP (P83180), HCYB_PANIN (P10787), HCYB_SCUCO (Q8IFJ8), HCYC_APHSP (Q9NFL6), HCYC_PANIN (P80096), HCYC_SCUCO (Q8T115), HCYD_APHSP (P02241), HCYD_SCUCO (Q95P07), HCYE_APHSP (P02242), HCYF_APHSP (Q9NFL5), HCYG_APHSP (Q9NFL4), HCY_SCYOL (C0HLU7), HCY_SCYSE (C0HLU8), PPO1_HOLDI (Q8I6K1), PPO1_SPOLT (Q3ZPT5), PPO2_DROME (Q9V521), PPO2_HOLDI (Q8I6K2), PPO3_DROER (Q8I1F6), PPO3_DROME (Q9W1V6), PRP1_BOMMO (Q27451), PRP1_MANSE (O44249), PRP2_BOMMO (Q27452), PRP2_GALME (Q6UEH6), PRP2_MANSE (Q25519), SSP1_BOMMO (P09179), SSP2_BOMMO (P20613) » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	13 sequences AJSP1_TRINI (P22327), ARY1_CALVI (P28513), ARY2_CALVI (P28514), CRPI_PERAM (Q25641), HC2C_MEGCR (P81732), HEXA_ANOGA (Q17020), HEXA_BLADI (Q17127), LSP1A_DROME (P11995), LSP1B_DROME (P11996), LSP1G_DROME (P11997), LSP2_DROME (Q24388), PHCY1_HOMAM (Q6KF82), PHCY2_HOMAM (Q6KF81) » more
UniProtKB/Swiss-Prot 'Partial' sequences	32 sequences HCY1_HOMAM (P82296), HCY1_LIODE (P84461), HCY1_MAJSQ (P82302), HCY1_NECPU (P84846), HCY2_HOMAM (P82297), HCY2_LIODE (P84462), HCY2_MAJSQ (P82303), HCY2_PANJA (P82312), HCY3_HOMAM (P82298), HCY3_MAJSQ (P82304), HCY3_PANJA (P82313), HCY4E_MAJSQ (P82306), HCY4_CARMA (P82309), HCY4_HOMAM (P82299), HCY4_MAJSQ (P82305), HCY5_HOMAM (P82300), HCY5_MAJSQ (P82307), HCY6_HOMAM (P82301), HCY6_MAJSQ (P82308), HCYA_CONCC (P84619), HCYA_TACTR (P02243), HCYB_CONCC (P84620), HCYIA_PANJA (P82310), HCYIB_PANJA (P82311), LEC_PENST (P84821), PHCY_LIODE (P84460), PHCY_LIOHO (P84768), PHCY_LIOMA (P84769), PHCY_NECPU (P84847), PPO3_SARAR (C0HJM0), PRP1_SIMDA (P85046), SSP1_AMSAL (P84632) » more
PDB [Detailed view]	10 PDB 1HC1; 1HCY; 1LL1; 1LLA; 1NOL; 1OXY; 3GWJ; 3HHS; 3IXV; 3IXW