PROSITE entry PS00214
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General information about the entry
Entry name [info] | FABP |
Accession [info] | PS00214 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-APR-2006 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00188 |
Name and characterization of the entry
Description [info] | Cytosolic fatty-acid binding proteins signature. |
Pattern [info] |
[GSAIVK]-{FE}-[FYW]-x-[LIVMF]-x(2)-{K}-x-[NHG]-[FY]-[DE]-x-[LIVMFY]- [LIVM]-{N}-{G}-[LIVMAKR]. |
Numerical results [info]
Total number of hits | 141 in 141 different sequences |
Number of true positive hits | 112 in 112 different sequences |
Number of 'unknown' hits | 1 |
Number of false positive hits | 28 in 28 different sequences |
Number of false negative sequences | 14 |
Number of 'partial' sequences | 2 |
Precision (true positives / (true positives + false positives)) | 80.00 % |
Recall (true positives / (true positives + false negatives)) | 88.89 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Version [info] | 2 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
112 sequences
FA10A_DANRE (Q9I8L5), FAB1A_DANRE (Q1AMT3), FABH_ASCSU (P55776), FABP1_AMBME (P81399), FABP1_CAEEL (Q20223), FABP1_DORPE (C4N147), FABP1_ECHGR (Q02970), FABP1_MANSE (P31416), FABP2_AMBME (P81400), FABP2_CAEEL (Q20224), FABP2_ECHGR (Q9BMK3), FABP2_MANSE (P31417), FABP3_CAEEL (Q20222), FABP4_BOVIN (P48035), FABP4_CAEEL (Q23092), FABP4_CEREL (A6YLM6), FABP4_HUMAN (P15090), FABP4_ICTTR (Q99P60), FABP4_MOUSE (P04117), FABP4_PIG (O97788), FABP4_PYGPA (A0A0K0MJN3), FABP4_RAT (P70623), FABP5_BOVIN (P55052), FABP5_CAEEL (O01814), FABP5_HUMAN (Q01469), FABP5_MOUSE (Q05816), FABP5_PYGPA (A0A0K0MJ13), FABP5_RAT (P55053), FABP6_CAEEL (O01812), FABP6_HUMAN (P51161), FABP6_MOUSE (P51162), FABP6_PIG (P10289), FABP6_RABIT (P50119), FABP6_RAT (P80020), FABP7_BOVIN (Q09139), FABP7_CAEEL (O02323), FABP7_CHICK (Q05423), FABP7_HUMAN (O15540), FABP7_MOUSE (P51880), FABP7_RAT (P55051), FABP8_CAEEL (O02324), FABP9_CAEEL (Q965W1), FABP9_HUMAN (Q0Z7S8), FABP9_MOUSE (O08716), FABP9_RAT (P55054), FABPH_BOSMU (Q4TZH2), FABPH_BOVIN (P10790), FABPH_HUMAN (P05413), FABPH_ICTTR (Q99P61), FABPH_MOUSE (P11404), FABPH_MYOLU (Q865F7), FABPH_ONCMY (O13008), FABPH_PIG (O02772), FABPH_RAT (P07483), FABPI_BOVIN (Q56JX9), FABPI_HUMAN (P12104), FABPI_MOUSE (P55050), FABPI_PIG (Q45KW7), FABPI_RAT (P02693), FABPI_XENLA (Q91775), FABPL_ANOPU (Q90239), FABPL_BOVIN (P80425), FABPL_CHICK (P80226), FABPL_GINCI (P80049), FABPL_HUMAN (P07148), FABPL_LEPPA (P82289), FABPL_LITCT (P0C241), FABPL_MOUSE (P12710), FABPL_PIG (P49924), FABPL_RAT (P02692), FABPL_RHASA (P80856), FABPL_RHIAE (P83409), FABPM_LOCMI (P41509), FABPM_SCHGR (P41496), FABP_ACASI (O76821), FABP_ANOGA (Q17017), FABP_BLOTA (Q17284), FABP_CLOSI (Q8MUC1), FABP_LEPDS (Q9U5P1), FABP_SCHJA (O45035), FABP_SCHMA (P29498), FABP_TYRPU (Q66RP5), MYP2_BOVIN (P02690), MYP2_HORSE (P0C6G6), MYP2_HUMAN (P02689), MYP2_MOUSE (P24526), MYP2_PIG(P86412), MYP2_RABIT (P02691), RABP1_BOVIN (P62964), RABP1_CHICK (P40220), RABP1_HIPCM (Q6T499), RABP1_HUMAN (P29762), RABP1_MOUSE (P62965), RABP1_PELSI (Q5R2J5), RABP1_RAT (P62966), RABP1_TAKRU (O42386), RABP2_BOVIN (Q5PXY7), RABP2_CHICK (P30370), RABP2_HUMAN (P29373), RABP2_MOUSE (P22935), RABP2_RAT (P51673), RABP2_XENLA (P50568), RET1_BOVIN (P02694), RET1_HUMAN (P09455), RET1_MOUSE (Q00915), RET1_RAT(P02696), RET2_HUMAN (P50120), RET2_MOUSE (Q08652), RET2_PIG(P50121), RET2_RAT(P06768), RET7_HUMAN (Q96R05), RET7_MOUSE (Q9EPC5)» more
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UniProtKB/Swiss-Prot False negative sequences |
14 sequences
FABP1_FASGI (Q9UAS2), FABP1_FASHE (Q7M4G0), FABP2_FASHE (Q7M4G1), FABP3_FASHE (Q9U1G6), FABPL_CHAVI (P82145), FABPL_SCHBI (P81653), FBP12_HUMAN (A6NFH5), FBP12_MOUSE (Q9DAK4), FBP12_RAT (B7SUM8), IOTA_GONVI (P82025), RET5_BOVIN (P82708), RET5_HUMAN (P82980), RET5_PONAB (Q5RBM7), UNAG_ANGJA (P0DM59)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
FABPI_RHASA (P81175), FABPL_LETCA (P82188) |
UniProtKB/Swiss-Prot 'Unknown' sequences |
1 sequence
VPS13_CHATD (G0S3B8) |
UniProtKB/Swiss-Prot False positive sequences |
28 sequences
DPOL_METJA (Q58295), FB278_ARATH (Q9FFS9), GLPG_PECAS (Q6CZL3), LPTD_FRAT1 (Q14IY9), LPTD_FRATH (Q2A216), LPTD_FRATN (A0Q5D8), LPTD_FRATO (Q0BKP5), LPTD_FRATT (Q5NHI7), MFNA_PYRFU (Q8U1P6), MFNA_PYRHO (O58679), MRAZ_RICPR (Q9ZCY1), MRAZ_RICTY (Q68WG6), MUT7_CAEEL (P34607), ORR12_ORYSJ (Q2HWG1), ORR13_ORYSJ (Q2HWG0), PYRG_NITHX (Q1QMJ4), PYRG_RHOP2 (Q2IWB8), PYRG_RICBR (Q1RHU4), PYRG_RICCN (Q92I97), PYRG_RICFE (Q4ULX9), PYRG_RICPR (Q9ZDF1), PYRG_RICTY (Q68WZ6), RRAGC_HUMAN (Q9HB90), RRAGC_MOUSE (Q99K70), SYFB_MESFL (Q6F166), SYR_METHJ (Q2FS66), TSN36_DANRE (Q6NWG0), ZWILC_CAEEL (Q95XP9)» more |
PDB [Detailed view] |
656 PDB
1A18; 1A2D; 1AB0; 1ACD; 1ADL; 1AEL; 1ALB; 1B4M; 1B56; 1BLR; 1BM5; 1BWY; 1CBI; 1CBQ; 1CBR; 1CBS; 1CRB; 1DC9; 1EAL; 1EII; 1EIO; 1FDQ; 1FE3; 1FTP; 1G5W; 1G74; 1G7N; 1HMR; 1HMS; 1HMT; 1ICM; 1ICN; 1IFB; 1IFC; 1JBH; 1JJJ; 1JJX; 1KGL; 1KZW; 1KZX; 1LFO; 1LIB; 1LIC; 1LID; 1LIE; 1LIF; 1LPJ; 1MDC; 1MVG; 1MX7; 1MX8; 1O1U; 1O1V; 1O8V; 1OPA; 1OPB; 1P6P; 1PMP; 1T8V; 1TOU; 1TOW; 1TVQ; 1TW4; 1URE; 1VYF; 1VYG; 1XCA; 1YIV; 1ZRY; 2ANS; 2CBR; 2CBS; 2F73; 2FLJ; 2FR3; 2FS6; 2FS7; 2FT9; 2FTB; 2G78; 2G79; 2G7B; 2HMB; 2HNX; 2IFB; 2JN3; 2JU3; 2JU7; 2JU8; 2K62; 2L67; 2L68; 2LFO; 2LKK; 2MJI; 2MM3; 2MO5; 2NNQ; 2POA; 2PY1; 2Q9S; 2QM9; 2QO4; 2QO5; 2QO6; 2RCQ; 2RCT; 2WUT; 3AKM; 3AKN; 3B2H; 3B2I; 3B2J; 3B2K; 3B2L; 3CBS; 3CR6; 3CWK; 3D95; 3D96; 3D97; 3F8A; 3F9D; 3FA6; 3FA7; 3FA8; 3FA9; 3FEK; 3FEL; 3FEN; 3FEP; 3FR2; 3FR4; 3FR5; 3HK1; 3I17; 3IFB; 3JS1; 3JSQ; 3NR3; 3P6C; 3P6D; 3P6E; 3P6F; 3P6G; 3P6H; 3PP6; 3PPT; 3Q6L; 3RSW; 3RZY; 3STK; 3STM; 3STN; 3VG2; 3VG3; 3VG4; 3VG5; 3VG6; 3VG7; 3WBG; 3WVM; 3WXQ; 4A1H; 4A1Y; 4A60; 4A8Z; 4AZM; 4AZN; 4AZO; 4AZP; 4AZQ; 4AZR; 4BVM; 4D6A; 4D6B; 4EXZ; 4I9R; 4I9S; 4LKP; 4LKT; 4M6S; 4M7M; 4NNS; 4NNT; 4QGV; 4QGW; 4QGX; 4QYN; 4QYP; 4QZT; 4QZU; 4RUU; 4TJZ; 4TKB; 4TKH; 4TKJ; 4WBK; 4YBP; 4YBU; 4YCE; 4YCH; 4YDA; 4YDB; 4YFP; 4YFQ; 4YFR; 4YGG; 4YGH; 4YGZ; 4YH0; 4YKM; 4YKO; 4ZCB; 4ZGU; 4ZH6; 4ZH9; 4ZJ0; 4ZR2; 5BVQ; 5BVS; 5BVT; 5C0N; 5CE4; 5D45; 5D47; 5D48; 5D4A; 5D8J; 5DG4; 5DPQ; 5EDB; 5EDC; 5F58; 5FAZ; 5FEN; 5H8T; 5H9A; 5HA1; 5HBS; 5HZ5; 5HZ6; 5HZ8; 5HZ9; 5HZQ; 5L8I; 5L8N; 5L8O; 5LJB; 5LJC; 5LJD; 5LJE; 5LJG; 5LJH; 5LJK; 5N4M; 5N4P; 5N4Q; 5OGB; 5U6G; 5UR9; 5URA; 5Y0F; 5Y0G; 5Y0X; 5Y12; 5Y13; 6AQ1; 6AT8; 6AYL; 6BTH; 6BTI; 6C1Z; 6C7Z; 6DO6; 6DO7; 6DRG; 6E50; 6E51; 6E5E; 6E5L; 6E5Q; 6E5R; 6E5S; 6E5T; 6E6K; 6E6L; 6E6M; 6E7M; 6EW2; 6EW4; 6EW5; 6HKR; 6I8X; 6I9F; 6L7K; 6L9O; 6LJS; 6LJT; 6LJU; 6LJV; 6LJW; 6LJX; 6MCU; 6MCV; 6MKV; 6MLB; 6MOP; 6MOQ; 6MOR; 6MOV; 6MOW; 6MOX; 6MP4; 6MPK; 6MQI; 6MQJ; 6MQW; 6MQX; 6MQY; 6MQZ; 6MR0; 6NNX; 6NNY; 6NOE; 6ON5; 6ON7; 6ON8; 6S2M; 6S2S; 6STS; 6VID; 6VIS; 6VIT; 6WNF; 6WNJ; 6WP0; 6WP1; 6WP2; 6XU5; 6XU9; 6XUA; 6XUW; 6XVQ; 6XVR; 6XVS; 6XVY; 6XW9; 6Z2U; 6Z2Z; 6ZSW; 6ZSX; 7A9Y; 7A9Z; 7AA0; 7AA1; 7DZE; 7DZF; 7DZG; 7DZH; 7DZI; 7DZJ; 7DZK; 7DZL; 7E25; 7EGO; 7EUV; 7EUW; 7FBF; 7FBM; 7FBN; 7FC4; 7FCG; 7FCX; 7FD7; 7FDT; 7FDU; 7FDX; 7FEK; 7FEU; 7FEZ; 7FF6; 7FFK; 7FFX; 7FG1; 7FG5; 7FVU; 7FVV; 7FVW; 7FVX; 7FVY; 7FVZ; 7FW0; 7FW1; 7FW2; 7FW3; 7FW4; 7FW5; 7FW6; 7FW7; 7FW8; 7FW9; 7FWA; 7FWB; 7FWC; 7FWD; 7FWE; 7FWF; 7FWG; 7FWH; 7FWI; 7FWJ; 7FWK; 7FWL; 7FWM; 7FWN; 7FWO; 7FWP; 7FWQ; 7FWR; 7FWS; 7FWT; 7FWU; 7FWV; 7FWW; 7FWX; 7FWY; 7FWZ; 7FX0; 7FX1; 7FX2; 7FX3; 7FX4; 7FX5; 7FX6; 7FX7; 7FX8; 7FX9; 7FXA; 7FXB; 7FXC; 7FXD; 7FXE; 7FXF; 7FXG; 7FXH; 7FXI; 7FXJ; 7FXK; 7FXL; 7FXM; 7FXN; 7FXO; 7FXP; 7FXQ; 7FXR; 7FXS; 7FXT; 7FXU; 7FXV; 7FXW; 7FXX; 7FXY; 7FXZ; 7FY0; 7FY1; 7FY2; 7FY3; 7FY4; 7FY5; 7FY6; 7FY7; 7FY8; 7FY9; 7FYA; 7FYB; 7FYC; 7FYD; 7FYE; 7FYF; 7FYG; 7FYH; 7FYI; 7FYJ; 7FYK; 7FYL; 7FYM; 7FYO; 7FYP; 7FYQ; 7FYR; 7FYS; 7FYT; 7FYU; 7FYV; 7FYW; 7FYX; 7FYY; 7FYZ; 7FZ0; 7FZ1; 7FZ2; 7FZ3; 7FZ4; 7FZ5; 7FZ6; 7FZ7; 7FZ8; 7FZ9; 7FZA; 7FZB; 7FZC; 7FZD; 7FZE; 7FZF; 7FZG; 7FZH; 7FZI; 7FZJ; 7FZK; 7FZL; 7FZM; 7FZN; 7FZO; 7FZP; 7FZQ; 7FZR; 7FZS; 7FZT; 7FZU; 7FZV; 7FZW; 7FZX; 7FZY; 7FZZ; 7G00; 7G01; 7G02; 7G03; 7G04; 7G05; 7G06; 7G07; 7G08; 7G09; 7G0A; 7G0B; 7G0C; 7G0E; 7G0F; 7G0G; 7G0H; 7G0I; 7G0J; 7G0K; 7G0L; 7G0M; 7G0N; 7G0O; 7G0P; 7G0Q; 7G0R; 7G0S; 7G0T; 7G0U; 7G0V; 7G0W; 7G0X; 7G0Y; 7G0Z; 7G10; 7G11; 7G12; 7G13; 7G14; 7G15; 7G16; 7G17; 7G18; 7G19; 7G1A; 7G1B; 7G1C; 7G1D; 7G1E; 7G1F; 7G1G; 7G1H; 7G1I; 7G1J; 7G1K; 7G1L; 7G1M; 7G1N; 7G1O; 7G1P; 7G1Q; 7G1R; 7G1S; 7G1T; 7G1U; 7G1V; 7G1W; 7G1X; 7G1Y; 7G1Z; 7G20; 7G21; 7JVG; 7JVY; 7JWD; 7JWR; 7JX2; 7JZ5; 7K3I; 7MFX; 7MFZ; 7NRW; 7NSR; 7NTP; 7O0J; 7O0K; 7O60; 7OXW; 7OXX; 7RY5; 7U8T; 7V2G; 7V5U; 7VB1; 7WC3; 7WCI; 7WD6; 7WDJ; 7WE5; 7WF0; 7WJ1; 7WKB; 7WKG; 7WOM; 7WPG; 7WPU; 7WPW; 7WQ7; 7X48; 7X4J; 7X50; 7XBC; 7XHM; 7XHU; 7YF1; 8D6H; 8D6L; 8D6N; 8DB2; 8DN1 » more |