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Entry: PS00214

General information about the entry

Entry name [info] FABP
Accession [info] PS00214
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-APR-2006 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00188

Name and characterization of the entry

Description [info] Cytosolic fatty-acid binding proteins signature.
Pattern [info] 
[GSAIVK]-{FE}-[FYW]-x-[LIVMF]-x(2)-{K}-x-[NHG]-[FY]-[DE]-x-[LIVMFY]-
[LIVM]-{N}-{G}-[LIVMAKR].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 138 in 138 different sequences
Number of true positive hits 111 in 111 different sequences
Number of 'unknown' hits 0
Number of false positive hits 27 in 27 different sequences
Number of false negative sequences 14
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 80.43 %
Recall (true positives / (true positives + false negatives)) 88.80 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 111 sequences 

FA10A_DANRE (Q9I8L5    ), FAB1A_DANRE (Q1AMT3    ), FABH_ASCSU  (P55776    ), 

FABP1_AMBME (P81399    ), FABP1_CAEEL (Q20223    ), FABP1_DORPE (C4N147    ), 
FABP1_ECHGR (Q02970    ), FABP1_MANSE (P31416    ), FABP2_AMBME (P81400    ), 
FABP2_CAEEL (Q20224    ), FABP2_ECHGR (Q9BMK3    ), FABP2_MANSE (P31417    ), 
FABP3_CAEEL (Q20222    ), FABP4_BOVIN (P48035    ), FABP4_CAEEL (Q23092    ), 
FABP4_CEREL (A6YLM6    ), FABP4_HUMAN (P15090    ), FABP4_ICTTR (Q99P60    ), 
FABP4_MOUSE (P04117    ), FABP4_PIG   (O97788    ), FABP4_PYGPA (A0A0K0MJN3), 
FABP4_RAT   (P70623    ), FABP5_BOVIN (P55052    ), FABP5_CAEEL (O01814    ), 
FABP5_HUMAN (Q01469    ), FABP5_MOUSE (Q05816    ), FABP5_PYGPA (A0A0K0MJ13), 
FABP5_RAT   (P55053    ), FABP6_CAEEL (O01812    ), FABP6_HUMAN (P51161    ), 
FABP6_MOUSE (P51162    ), FABP6_PIG   (P10289    ), FABP6_RABIT (P50119    ), 
FABP6_RAT   (P80020    ), FABP7_BOVIN (Q09139    ), FABP7_CAEEL (O02323    ), 
FABP7_CHICK (Q05423    ), FABP7_HUMAN (O15540    ), FABP7_MOUSE (P51880    ), 
FABP7_RAT   (P55051    ), FABP8_CAEEL (O02324    ), FABP9_CAEEL (Q965W1    ), 
FABP9_HUMAN (Q0Z7S8    ), FABP9_MOUSE (O08716    ), FABP9_RAT   (P55054    ), 
FABPH_BOSMU (Q4TZH2    ), FABPH_BOVIN (P10790    ), FABPH_HUMAN (P05413    ), 
FABPH_ICTTR (Q99P61    ), FABPH_MOUSE (P11404    ), FABPH_MYOLU (Q865F7    ), 
FABPH_ONCMY (O13008    ), FABPH_PIG   (O02772    ), FABPH_RAT   (P07483    ), 
FABPI_BOVIN (Q56JX9    ), FABPI_HUMAN (P12104    ), FABPI_MOUSE (P55050    ), 
FABPI_PIG   (Q45KW7    ), FABPI_RAT   (P02693    ), FABPI_XENLA (Q91775    ), 
FABPL_ANOPU (Q90239    ), FABPL_BOVIN (P80425    ), FABPL_CHICK (P80226    ), 
FABPL_GINCI (P80049    ), FABPL_HUMAN (P07148    ), FABPL_LEPPA (P82289    ), 
FABPL_LITCT (P0C241    ), FABPL_MOUSE (P12710    ), FABPL_PIG   (P49924    ), 
FABPL_RAT   (P02692    ), FABPL_RHASA (P80856    ), FABPL_RHIAE (P83409    ), 
FABPM_LOCMI (P41509    ), FABPM_SCHGR (P41496    ), FABP_ACASI  (O76821    ), 
FABP_ANOGA  (Q17017    ), FABP_BLOTA  (Q17284    ), FABP_CLOSI  (Q8MUC1    ), 
FABP_LEPDS  (Q9U5P1    ), FABP_SCHJA  (O45035    ), FABP_SCHMA  (P29498    ), 
MYP2_BOVIN  (P02690    ), MYP2_HORSE  (P0C6G6    ), MYP2_HUMAN  (P02689    ), 
MYP2_MOUSE  (P24526    ), MYP2_PIG    (P86412    ), MYP2_RABIT  (P02691    ), 
RABP1_BOVIN (P62964    ), RABP1_CHICK (P40220    ), RABP1_HIPCM (Q6T499    ), 
RABP1_HUMAN (P29762    ), RABP1_MOUSE (P62965    ), RABP1_PELSI (Q5R2J5    ), 
RABP1_RAT   (P62966    ), RABP1_TAKRU (O42386    ), RABP2_BOVIN (Q5PXY7    ), 
RABP2_CHICK (P30370    ), RABP2_HUMAN (P29373    ), RABP2_MOUSE (P22935    ), 
RABP2_RAT   (P51673    ), RABP2_XENLA (P50568    ), RET1_BOVIN  (P02694    ), 
RET1_HUMAN  (P09455    ), RET1_MOUSE  (Q00915    ), RET1_RAT    (P02696    ), 
RET2_HUMAN  (P50120    ), RET2_MOUSE  (Q08652    ), RET2_PIG    (P50121    ), 
RET2_RAT    (P06768    ), RET7_HUMAN  (Q96R05    ), RET7_MOUSE  (Q9EPC5    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 14 sequences 

FABP1_FASGI (Q9UAS2    ), FABP1_FASHE (Q7M4G0    ), FABP2_FASHE (Q7M4G1    ), 

FABP3_FASHE (Q9U1G6    ), FABPL_CHAVI (P82145    ), FABPL_SCHBI (P81653    ), 
FBP12_HUMAN (A6NFH5    ), FBP12_MOUSE (Q9DAK4    ), FBP12_RAT   (B7SUM8    ), 
IOTA_GONVI  (P82025    ), RET5_BOVIN  (P82708    ), RET5_HUMAN  (P82980    ), 
RET5_PONAB  (Q5RBM7    ), UNAG_ANGJA  (P0DM59    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 2 sequences 

FABPI_RHASA (P81175    ), FABPL_LETCA (P82188    )


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			27 sequences
			


			
DPOL_METJA  (Q58295    ), FB278_ARATH (Q9FFS9    ), GLPG_PECAS  (Q6CZL3    ), 

			
LPTD_FRAT1  (Q14IY9    ), LPTD_FRATH  (Q2A216    ), LPTD_FRATN  (A0Q5D8    ), 
LPTD_FRATO  (Q0BKP5    ), LPTD_FRATT  (Q5NHI7    ), MFNA_PYRFU  (Q8U1P6    ), 
MFNA_PYRHO  (O58679    ), MRAZ_RICPR  (Q9ZCY1    ), MRAZ_RICTY  (Q68WG6    ), 
MUT7_CAEEL  (P34607    ), ORR12_ORYSJ (Q2HWG1    ), ORR13_ORYSJ (Q2HWG0    ), 
PYRG_NITHX  (Q1QMJ4    ), PYRG_RHOP2  (Q2IWB8    ), PYRG_RICBR  (Q1RHU4    ), 
PYRG_RICCN  (Q92I97    ), PYRG_RICFE  (Q4ULX9    ), PYRG_RICPR  (Q9ZDF1    ), 
PYRG_RICTY  (Q68WZ6    ), RRAGC_HUMAN (Q9HB90    ), RRAGC_MOUSE (Q99K70    ), 
SYFB_MESFL  (Q6F166    ), SYR_METHJ   (Q2FS66    ), ZWILC_CAEEL (Q95XP9    )


			
			» more
			


				
	

	

		PDB
[Detailed view]		
		
			338 PDB
			


			1A18; 1A2D; 1AB0; 1ACD; 1ADL; 1AEL; 1ALB; 1B4M; 1B56; 1BLR; 1BM5; 1BWY; 
			
				1CBI; 1CBQ; 1CBR; 1CBS; 1CRB; 1DC9; 1EAL; 1EII; 1EIO; 1FDQ; 1FE3; 1FTP; 
				1G5W; 1G74; 1G7N; 1HMR; 1HMS; 1HMT; 1ICM; 1ICN; 1IFB; 1IFC; 1JBH; 1JJJ; 
				1JJX; 1KGL; 1KZW; 1KZX; 1LFO; 1LIB; 1LIC; 1LID; 1LIE; 1LIF; 1LPJ; 1MDC; 
				1MVG; 1MX7; 1MX8; 1O1U; 1O1V; 1O8V; 1OPA; 1OPB; 1P6P; 1PMP; 1T8V; 1TOU; 
				1TOW; 1TVQ; 1TW4; 1URE; 1VYF; 1VYG; 1XCA; 1YIV; 1ZRY; 2ANS; 2CBR; 2CBS; 
				2F73; 2FLJ; 2FR3; 2FS6; 2FS7; 2FT9; 2FTB; 2G78; 2G79; 2G7B; 2HMB; 2HNX; 
				2IFB; 2JN3; 2JU3; 2JU7; 2JU8; 2K62; 2L67; 2L68; 2LFO; 2LKK; 2MJI; 2MM3; 
				2MO5; 2NNQ; 2POA; 2PY1; 2Q9S; 2QM9; 2QO4; 2QO5; 2QO6; 2RCQ; 2RCT; 2WUT; 
				3AKM; 3AKN; 3B2H; 3B2I; 3B2J; 3B2K; 3B2L; 3CBS; 3CR6; 3CWK; 3D95; 3D96; 
				3D97; 3F8A; 3F9D; 3FA6; 3FA7; 3FA8; 3FA9; 3FEK; 3FEL; 3FEN; 3FEP; 3FR2; 
				3FR4; 3FR5; 3HK1; 3I17; 3IFB; 3JS1; 3JSQ; 3NR3; 3P6C; 3P6D; 3P6E; 3P6F; 
				3P6G; 3P6H; 3PP6; 3PPT; 3Q6L; 3RSW; 3RZY; 3STK; 3STM; 3STN; 3VG2; 3VG3; 
				3VG4; 3VG5; 3VG6; 3VG7; 3WBG; 3WVM; 3WXQ; 4A1H; 4A1Y; 4A60; 4A8Z; 4AZM; 
				4AZN; 4AZO; 4AZP; 4AZQ; 4AZR; 4BVM; 4D6A; 4D6B; 4EXZ; 4I9R; 4I9S; 4LKP; 
				4LKT; 4M6S; 4M7M; 4NNS; 4NNT; 4QGV; 4QGW; 4QGX; 4QYN; 4QYP; 4QZT; 4QZU; 
				4RUU; 4TJZ; 4TKB; 4TKH; 4TKJ; 4WBK; 4YBP; 4YBU; 4YCE; 4YCH; 4YDA; 4YDB; 
				4YFP; 4YFQ; 4YFR; 4YGG; 4YGH; 4YGZ; 4YH0; 4YKM; 4YKO; 4ZCB; 4ZGU; 4ZH6; 
				4ZH9; 4ZJ0; 4ZR2; 5BVQ; 5BVS; 5BVT; 5C0N; 5CE4; 5D45; 5D47; 5D48; 5D4A; 
				5D8J; 5DG4; 5DPQ; 5EDB; 5EDC; 5F58; 5FAZ; 5FEN; 5H8T; 5H9A; 5HA1; 5HBS; 
				5HZ5; 5HZ6; 5HZ8; 5HZ9; 5HZQ; 5L8I; 5L8N; 5L8O; 5LJB; 5LJC; 5LJD; 5LJE; 
				5LJG; 5LJH; 5LJK; 5N4M; 5N4P; 5N4Q; 5OGB; 5U6G; 5UR9; 5URA; 5Y0F; 5Y0G; 
				5Y0X; 5Y12; 5Y13; 6AQ1; 6AT8; 6AYL; 6BTH; 6BTI; 6C1Z; 6C7Z; 6DO6; 6DO7; 
				6DRG; 6E50; 6E51; 6E5E; 6E5L; 6E5Q; 6E5R; 6E5S; 6E5T; 6E6K; 6E6L; 6E6M; 
				6E7M; 6EW2; 6EW4; 6EW5; 6HKR; 6I8X; 6I9F; 6LJS; 6LJT; 6LJU; 6LJV; 6LJW; 
				6LJX; 6MCU; 6MCV; 6MKV; 6MLB; 6MOP; 6MOQ; 6MOR; 6MOV; 6MOW; 6MOX; 6MP4; 
				6MPK; 6MQI; 6MQJ; 6MQW; 6MQX; 6MQY; 6MQZ; 6MR0; 6NNX; 6NNY; 6NOE; 6ON5; 
				6ON7; 6ON8; 6S2M; 6S2S; 6STS; 6XU5; 6XU9; 6XUA; 6XUW; 6XVQ; 6XVR; 6XVS; 
				6XVY; 6XW9
			
			

			» more

				
	





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