PROSITE entry PS00232
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General information about the entry
| Entry name [info] | CADHERIN_1 |
| Accession [info] | PS00232 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-APR-1990 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00205 |
Name and characterization of the entry
| Description [info] | Cadherin domain signature. |
| Pattern [info] |
[LIV]-x-[LIV]-x-D-x-N-D-[NH]-x-P. |
Numerical results [info]
| Total number of hits | 1'521 in 313 different sequences |
| Number of true positive hits | 1'521 in 313 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 20 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 98.70 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes |
| Maximum number of repetitions [info] | 23 |
| Site [info] | calcium(?) at position 5 |
| Site [info] | calcium(?) at position 7 |
| Site [info] | calcium(?) at position 8 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
313 sequences
CAD10_CHICK (P79995 ), CAD10_HUMAN (Q9Y6N8 ), CAD10_MOUSE (P70408 ), CAD11_CHICK (O93319 ), CAD11_HUMAN (P55287 ), CAD11_MOUSE (P55288 ), CAD12_HUMAN (P55289 ), CAD12_MOUSE (Q5RJH3 ), CAD13_BOVIN (Q3B7N0 ), CAD13_CHICK (P33150 ), CAD13_HUMAN (P55290 ), CAD13_MOUSE (Q9WTR5 ), CAD13_PONAB (Q5R5W6 ), CAD15_HUMAN (P55291 ), CAD15_MOUSE (P33146 ), CAD16_HUMAN (O75309 ), CAD16_MOUSE (O88338 ), CAD16_RABIT (Q28634 ), CAD17_HUMAN (Q12864 ), CAD17_MOUSE (Q9R100 ), CAD17_RAT (P55281 ), CAD18_BOVIN (Q08DJ5 ), CAD18_HUMAN (Q13634 ), CAD19_HUMAN (Q9H159 ), CAD20_CHICK (Q8QGH3 ), CAD20_HUMAN (Q9HBT6 ), CAD20_MOUSE (Q9Z0M3 ), CAD20_RAT (Q5DWV1 ), CAD20_XENLA (Q91838 ), CAD22_HUMAN (Q9UJ99 ), CAD22_MOUSE (Q9WTP5 ), CAD22_RAT (Q63315 ), CAD23_HUMAN (Q9H251 ), CAD23_MOUSE (Q99PF4 ), CAD23_RAT (P58365 ), CAD24_HUMAN (Q86UP0 ), CAD24_MOUSE (Q6PFX6 ), CAD26_HUMAN (Q8IXH8 ), CAD26_MOUSE (P59862 ), CAD2A_XENLA (P33147 ), CAD2B_XENLA (P20310 ), CAD86_DROME (Q9VGW1 ), CAD87_DROME (Q9VGG5 ), CAD89_DROME (Q9VEU1 ), CAD99_DROME (Q9VAF5 ), CADE_DROME (Q24298 ), CADH1_BOVIN (Q6R8F2 ), CADH1_CANLF (F1PAA9 ), CADH1_CHICK (P08641 ), CADH1_HUMAN (P12830 ), CADH1_MOUSE (P09803 ), CADH1_PONAB (Q5RAX1 ), CADH1_RAT (Q9R0T4 ), CADH1_XENLA (P30944 ), CADH2_BOVIN (P19534 ), CADH2_CALJA (B0KW95 ), CADH2_CHICK (P10288 ), CADH2_CRIGR (O55075 ), CADH2_DANRE (Q90275 ), CADH2_HUMAN (P19022 ), CADH2_MOUSE (P15116 ), CADH2_OTOGA (B4USZ0 ), CADH2_PONAB (Q5R9X1 ), CADH2_RAT (Q9Z1Y3 ), CADH2_RHIFE (B2KI42 ), CADH3_BOVIN (P19535 ), CADH3_CAEEL (P34616 ), CADH3_HUMAN (P22223 ), CADH3_MOUSE (P10287 ), CADH3_PIG (O18926 ), CADH4_CAEEL (Q19319 ), CADH4_CHICK (P24503 ), CADH4_HUMAN (P55283 ), CADH4_MOUSE (P39038 ), CADH4_RAT (Q63149 ), CADH4_XENLA (P79883 ), CADH5_BOVIN (Q6URK6 ), CADH5_CHICK (Q8AYD0 ), CADH5_HUMAN (P33151 ), CADH5_MOUSE (P55284 ), CADH5_PIG (O02840 ), CADH6_BOVIN (Q3SWX5 ), CADH6_CHICK (Q90762 ), CADH6_HUMAN (P55285 ), CADH6_MOUSE (P97326 ), CADH6_RAT (P55280 ), CADH7_CHICK (Q90763 ), CADH7_HUMAN (Q9ULB5 ), CADH7_MOUSE (Q8BM92 ), CADH7_RAT (Q5DWV2 ), CADH8_HUMAN (P55286 ), CADH8_MOUSE (P97291 ), CADH8_RAT (O54800 ), CADH9_HUMAN (Q9ULB4 ), CADH9_MOUSE (P70407 ), CADHB_XENLA (P33152 ), CADHF_XENLA (P33148 ), CADHK_CHICK (P33145 ), CADN2_DROME (Q9VJB6 ), CADN_DROME (O15943 ), CDHR1_BOVIN (Q8WN91 ), CDHR1_CHICK (Q8UVJ7 ), CDHR1_DANRE (Q6B3P0 ), CDHR1_HUMAN (Q96JP9 ), CDHR1_MOUSE (Q8VHP6 ), CDHR1_RAT (Q91XU7 ), CDHR1_XENLA (Q6B457 ), CDHR2_HUMAN (Q9BYE9 ), CDHR2_MOUSE (E9Q7P9 ), CDHR4_HUMAN (A6H8M9 ), CDHR5_HUMAN (Q9HBB8 ), CDHR5_MOUSE (Q8VHF2 ), CDHR5_RAT (Q9JIK1 ), CELR1_HUMAN (Q9NYQ6 ), CELR1_MOUSE (O35161 ), CELR2_HUMAN (Q9HCU4 ), CELR2_MOUSE (Q9R0M0 ), CELR2_RAT (Q9QYP2 ), CELR3_HUMAN (Q9NYQ7 ), CELR3_MOUSE (Q91ZI0 ), CELR3_RAT (O88278 ), CELR_CAEEL (G5EDK5 ), DSC1_BOVIN (Q01107 ), DSC1_HUMAN (Q08554 ), DSC1_MOUSE (P55849 ), DSC2L_DANRE (F1QSQ0 ), DSC2_BOVIN (P33545 ), DSC2_HUMAN (Q02487 ), DSC2_MOUSE (P55292 ), DSC3_BOVIN (Q28060 ), DSC3_HUMAN (Q14574 ), DSC3_MOUSE (P55850 ), DSG1A_MOUSE (Q61495 ), DSG1B_MOUSE (Q7TSF1 ), DSG1C_MOUSE (Q7TSF0 ), DSG1_BOVIN (Q03763 ), DSG1_CANLF (Q9GKQ8 ), DSG1_HUMAN (Q02413 ), DSG1_PIG (Q3BDI7 ), DSG21_DANRE (H2EQR6 ), DSG2L_DANRE (A0A8M2BIB6), DSG2_HUMAN (Q14126 ), DSG2_MOUSE (O55111 ), DSG3_CANLF (Q7YRU7 ), DSG3_HUMAN (P32926 ), DSG3_MOUSE (O35902 ), DSG4_HUMAN (Q86SJ6 ), DSG4_MOUSE (Q7TMD7 ), DSG4_RAT (Q6W3B0 ), DS_DROME (Q24292 ), FAT1_HUMAN (Q14517 ), FAT2_DROME (Q9VW71 ), FAT2_HUMAN (Q9NYQ8 ), FAT2_MOUSE (Q5F226 ), FAT2_RAT (O88277 ), FAT3_HUMAN (Q8TDW7 ), FAT3_MOUSE (Q8BNA6 ), FAT3_RAT (Q8R508 ), FAT4_HUMAN (Q6V0I7 ), FAT4_MOUSE (Q2PZL6 ), FAT_DROME (P33450 ), HMR1_CAEEL (Q967F4 ), PC11X_GORGO (Q6X862 ), PC11X_HUMAN (Q9BZA7 ), PC11X_PANPA (Q6WYY1 ), PC11X_PANTR (Q71M42 ), PC11X_PIG (Q6KEQ9 ), PC11X_PONPY (Q6WXV7 ), PC11Y_HUMAN (Q9BZA8 ), PCD10_HUMAN (Q9P2E7 ), PCD12_HUMAN (Q9NPG4 ), PCD12_MOUSE (O55134 ), PCD15_CHICK (Q0ZM14 ), PCD15_HUMAN (Q96QU1 ), PCD15_MOUSE (Q99PJ1 ), PCD16_HUMAN (Q96JQ0 ), PCD16_MOUSE (E9PVD3 ), PCD16_RAT (D4ACX8 ), PCD17_HUMAN (O14917 ), PCD18_BOVIN (A7MB46 ), PCD18_HUMAN (Q9HCL0 ), PCD18_MOUSE (Q8VHR0 ), PCD19_HUMAN (Q8TAB3 ), PCD19_MOUSE (Q80TF3 ), PCD20_HUMAN (Q8N6Y1 ), PCD20_MOUSE (Q8BIZ0 ), PCD23_HUMAN (Q6V1P9 ), PCDA1_HUMAN (Q9Y5I3 ), PCDA1_PANTR (Q5DRF5 ), PCDA2_HUMAN (Q9Y5H9 ), PCDA2_PANTR (Q5DRF0 ), PCDA3_HUMAN (Q9Y5H8 ), PCDA3_PANTR (Q5DRE9 ), PCDA4_HUMAN (Q9UN74 ), PCDA4_MOUSE (O88689 ), PCDA4_PANTR (Q5DRE8 ), PCDA4_RAT (Q767I8 ), PCDA5_HUMAN (Q9Y5H7 ), PCDA5_PANTR (Q5DRE7 ), PCDA6_HUMAN (Q9UN73 ), PCDA6_PANTR (Q5DRE6 ), PCDA7_HUMAN (Q9UN72 ), PCDA7_MOUSE (Q91Y13 ), PCDA7_PANTR (Q5DRE5 ), PCDA8_HUMAN (Q9Y5H6 ), PCDA8_PANTR (Q5DRE4 ), PCDA9_HUMAN (Q9Y5H5 ), PCDA9_MOUSE (Q91Y11 ), PCDA9_PANTR (Q5DRE3 ), PCDAA_HUMAN (Q9Y5I2 ), PCDAA_MOUSE (Q91Y20 ), PCDAA_PANTR (Q5DRF4 ), PCDAB_HUMAN (Q9Y5I1 ), PCDAB_PANTR (Q5DRF3 ), PCDAC_HUMAN (Q9UN75 ), PCDAC_PANTR (Q5DRF2 ), PCDAD_HUMAN (Q9Y5I0 ), PCDAD_PANTR (Q5DRF1 ), PCDB1_HUMAN (Q9Y5F3 ), PCDB1_PANTR (Q5DRE0 ), PCDB2_HUMAN (Q9Y5E7 ), PCDB2_PANTR (Q5DRD2 ), PCDB3_HUMAN (Q9Y5E6 ), PCDB3_PANTR (Q5DRD1 ), PCDB4_HUMAN (Q9Y5E5 ), PCDB4_PANTR (Q5DRD0 ), PCDB5_HUMAN (Q9Y5E4 ), PCDB5_PANTR (Q5DRC9 ), PCDB6_HUMAN (Q9Y5E3 ), PCDB6_MOUSE (Q91XZ4 ), PCDB6_PANTR (Q5DRC8 ), PCDB7_HUMAN (Q9Y5E2 ), PCDB7_PANTR (Q5DRC7 ), PCDB8_HUMAN (Q9UN66 ), PCDB8_MOUSE (Q91XZ2 ), PCDB8_PANTR (Q5DRC6 ), PCDB9_HUMAN (Q9Y5E1 ), PCDB9_PANTR (Q5DRC4 ), PCDBA_HUMAN (Q9UN67 ), PCDBA_PANTR (Q5DRD9 ), PCDBB_HUMAN (Q9Y5F2 ), PCDBB_PANTR (Q5DRD8 ), PCDBC_HUMAN (Q9Y5F1 ), PCDBC_PANTR (Q5DRD7 ), PCDBD_HUMAN (Q9Y5F0 ), PCDBD_PANTR (Q5DRD6 ), PCDBE_HUMAN (Q9Y5E9 ), PCDBE_MOUSE (Q6PB90 ), PCDBE_PANTR (Q5DRD5 ), PCDBF_HUMAN (Q9Y5E8 ), PCDBF_PANTR (Q5DRD3 ), PCDBG_HUMAN (Q9NRJ7 ), PCDBH_PANTR (Q5DRC3 ), PCDBI_HUMAN (Q96TA0 ), PCDBI_MOUSE (Q91Y02 ), PCDBI_PANTR (Q5DRD4 ), PCDC1_HUMAN (Q9H158 ), PCDC1_PANTR (Q5DRE2 ), PCDC2_HUMAN (Q9Y5I4 ), PCDC2_PANTR (Q5DRE1 ), PCDG1_HUMAN (Q9Y5H4 ), PCDG1_PANTR (Q5DRC2 ), PCDG2_HUMAN (Q9Y5H1 ), PCDG2_PANTR (Q5DRB8 ), PCDG3_HUMAN (Q9Y5H0 ), PCDG3_PANTR (Q5DRB7 ), PCDG4_HUMAN (Q9Y5G9 ), PCDG4_MOUSE (Q91XY4 ), PCDG4_PANTR (Q5DRB6 ), PCDG5_HUMAN (Q9Y5G8 ), PCDG5_PANTR (Q5DRB5 ), PCDG6_HUMAN (Q9Y5G7 ), PCDG6_PANTR (Q5DRB4 ), PCDG7_HUMAN (Q9Y5G6 ), PCDG7_PANTR (Q5DRB3 ), PCDG8_HUMAN (Q9Y5G5 ), PCDG8_PANTR (Q5DRB2 ), PCDG9_HUMAN (Q9Y5G4 ), PCDG9_PANTR (Q5DRB1 ), PCDGA_HUMAN (Q9Y5H3 ), PCDGA_PANTR (Q5DRC1 ), PCDGB_HUMAN (Q9Y5H2 ), PCDGB_PANTR (Q5DRC0 ), PCDGC_HUMAN (O60330 ), PCDGC_PANTR (Q5DRB9 ), PCDGD_HUMAN (Q9Y5G3 ), PCDGD_PANTR (Q5DRB0 ), PCDGE_HUMAN (Q9Y5G2 ), PCDGE_PANTR (Q5DRA9 ), PCDGF_HUMAN (Q9Y5G1 ), PCDGG_HUMAN (Q9UN71 ), PCDGG_PANTR (Q5DRA8 ), PCDGH_HUMAN (Q9Y5G0 ), PCDGH_PANTR (Q5DRA7 ), PCDGI_HUMAN (Q9Y5F9 ), PCDGI_PANTR (Q5DRA6 ), PCDGJ_HUMAN (Q9Y5F8 ), PCDGJ_PANTR (Q5DRA5 ), PCDGK_HUMAN (Q9UN70 ), PCDGK_PANTR (Q5DRA4 ), PCDGL_HUMAN (Q9Y5F7 ), PCDGL_PANTR (Q5DRA3 ), PCDGM_HUMAN (Q9Y5F6 ), PCDGM_PANTR (Q5DRA2 ), PCDH1_HUMAN (Q08174 ), PCDH3_RAT (Q63418 ), PCDH7_HUMAN (O60245 ), PCDH8_HUMAN (O95206 ), PCDH8_MOUSE (Q7TSK3 ), PCDH8_RAT (D3ZE55 ), PCDH9_HUMAN (Q9HC56 ), PCDL_ACRMI (B8V7Q1 ), STAN_DROME (Q9V5N8 )» more
|
| UniProtKB/Swiss-Prot False negative sequences |
20 sequences
CAD96_DROME (Q9VBW3 ), CASY1_CAEEL (G5ED46 ), CDHR3_HUMAN (Q6ZTQ4 ), CDHR3_MOUSE (Q8BL00 ), CSTN1_DANRE (F1R520 ), CSTN1_DROME (Q9V498 ), CSTN1_HUMAN (O94985 ), CSTN1_MOUSE (Q9EPL2 ), CSTN1_RAT (Q6Q0N0 ), CSTN2_DANRE (B0S5G3 ), CSTN2_HUMAN (Q9H4D0 ), CSTN2_MOUSE (Q9ER65 ), CSTN2_RAT (Q8VDA1 ), CSTN3_BOVIN (Q0VCN6 ), CSTN3_DANRE (A0A8M9PFP2), CSTN3_HUMAN (Q9BQT9 ), CSTN3_MOUSE (Q99JH7 ), CSTN3_PONAB (Q5R9Q9 ), CSTN3_RAT (Q8R553 ), HMU_HALWD (Q18DN4 )» more |
| PDB [Detailed view] |
134 PDB
1EDH; 1FF5; 1L3W; 1NCG; 1NCH; 1NCI; 1NCJ; 1Q1P; 1SUH; 1WYJ; 2A4E; 2A62; 2O72; 2QVF; 2QVI; 2V37; 2WCP; 2WHV; 2YQG; 2YST; 3K5R; 3K5S; 3LND; 3LNE; 3LNF; 3LNG; 3LNH; 3LNI; 3MVS; 3PPE; 3Q2L; 3Q2N; 3Q2V; 3Q2W; 3QRB; 3UBH; 4APX; 4AQ8; 4AQA; 4AQE; 4AXW; 4NQQ; 4NUM; 4NUP; 4NUQ; 4OY9; 4QD2; 4XXW; 4ZML; 4ZMN; 4ZMO; 4ZMP; 4ZMQ; 4ZMT; 4ZMV; 4ZMW; 4ZMX; 4ZMY; 4ZMZ; 4ZT1; 4ZTE; 5CYX; 5CZR; 5DZV; 5DZW; 5DZX; 5DZY; 5EQX; 5ERD; 5ERP; 5I8D; 5IRY; 5J5J; 5JYM; 5K8R; 5KJ4; 5SZQ; 5T4M; 5T4N; 5TFK; 5TFL; 5TFM; 5ULU; 5UN2; 5UZ8; 5VT8; 5VVM; 5W1D; 5WJ8; 5WJM; 6BWN; 6BX7; 6C13; 6CG6; 6CGB; 6CGS; 6CGU; 6CV7; 6CXY; 6E8F; 6EET; 6MEQ; 6MER; 6MFO; 6MGA; 6N22; 6N2E; 6OAE; 6PIM; 6QNT; 6QNU; 6SIT; 6ULM; 6VEL; 6VFP; 6VFQ; 6VFR; 6VFT; 6VFU; 6VFV; 6VFW; 6VG4; 6ZTB; 6ZTR; 7A7D; 7AGF; 7AGG; 7CME; 7CMF; 7CYM; 7EV1; 7N86; 7SKH; 7STZ » more |