PROSITE entry PS00233

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General information about the entry

Entry name [info]	CHIT_BIND_RR_1
Accession [info]	PS00233
Entry type [info]	PATTERN
Date [info]	01-APR-1990 CREATED; 01-APR-2006 DATA UPDATE; 13-SEP-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00206

Name and characterization of the entry

Description [info]	Chitin-binding type R&R domain signature.
Pattern [info]	G-x(7)-[DEN]-G-x(6)-[FY]-x-A-[DNG]-x(2,3)-G-[FY]-x-[APV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_04 which contains 570'157 sequence entries.

Total number of hits	72 in 72 different sequences
Number of true positive hits	71 in 71 different sequences
Number of 'unknown' hits	0
Number of false positive hits	1
Number of false negative sequences	10
Number of 'partial' sequences	3

Precision (true positives / (true positives + false positives))	98.61 %
Recall (true positives / (true positives + false negatives))	87.65 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	1
Version [info]	2

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	71 sequences CU01_ANOGA (Q17015), CU02_HOMAM (P81386), CU02_LONON (P85196), CU03_HOMAM (P81387), CU03_LONON (P85197), CU04_HOMAM (P81388), CU05_HOMAM (P81389), CU07_LOCMI (P11733), CU08_LOCMI (P11734), CU109_IXORI (P84251), CU12_HYACE (P45589), CU14A_LIMPO (P83354), CU14B_LIMPO (P83355), CU14_MANSE (P13229), CU15_MANSE (Q94984), CU168_IXORI (P84252), CU16_MANSE (Q25504), CU17_BOMMO (O02387), CU18A_LOCMI (P83994), CU18B_LOCMI (P83995), CU198_LOCMI (P82166), CU19_ARADI (P80515), CU19_LOCMI (P45583), CU1A_HOMAM (P81384), CU1B_HOMAM (P81385), CU20_MANSE (Q8T635), CU20_TENMO (P26967), CU21_LOCMI (P81225), CU22_BOMMO (O02388), CU24_ARADI (P80516), CU26_ARADI (P80517), CU30_BOMMO (Q08738), CU36_MANSE (Q8MUC5), CU55_ARADI (P80518), CU57_ARADI (P80519), CU66_HYACE (P45590), CUA1A_TENMO (P80681), CUA2B_TENMO (P80682), CUA3A_TENMO (P80683), CUD1_SCHGR (Q7M4F4), CUD2_SCHGR (Q7M4F3), CUD4_LOCMI (P21799), CUD4_SCHGR (Q7M4F1), CUD5_LOCMI (P56561), CUD5_SCHGR (P56562), CUD6_SCHGR (Q7M4E8), CUD8_SCHGR (Q7M4F2), CUD9_SCHGR (Q7M4F0), CUO7_BLACR (P82120), CUO8_BLACR (P82121), CUP7_DROME (P27779), CUP8_DROME (P27780), CUPA1_CANPG (P81575), CUPA2_CANPG (P81576), CUPA3_CANPG (P81577), CUPA4_CANPG (P81578), CUPA5_CANPG (P81579), CUPP_DROME (P14484), CUPP_DROPS (P16369), LCP1_DROME (P02839), LCP1_DROMI (P91627), LCP1_HELAM (O02443), LCP2_DROME (P07187), LCP2_DROMI (P91629), LCP34_DROMI (Q01774), LCP3_DROME (P07188), LCP4_DROME (P07189), LCP81_DROME (C0HL64), LCP82_DROME (C0HL65), LCP9_DROME (P82384), RESIL_DROME (Q9V7U0) » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	10 sequences CU22_TENMO (P26968), CU27_MANSE (Q8T4J9), CU36A_MANSE (Q8T634), CUC11_CANPG (P81589), CUD3_SCHGR (Q7M4E9), CUO6_BLACR (P82119), LCP2A_DROME (Q7JZV0), LCP51_DROME (C0HL62), LCP52_DROME (C0HL63), MBN_DROME (P52302) » more
UniProtKB/Swiss-Prot 'Partial' sequences	3 sequences CUP1_SARBU (P14485), CUP4_SARBU (P14486), CUP6_SARBU (P14487)
UniProtKB/Swiss-Prot False positive sequences	1 sequence OXDD_BACSU (O34767)