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PROSITE entry PS00234


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PURL: https://purl.expasy.org/prosite/signature/PS00234

Direct ScanProsite submission
General information about the entry

Entry name [info] GAS_VESICLE_A_1
Accession [info] PS00234
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00207

Name and characterization of the entry

Description [info] Gas vesicles protein GVPa signature 1.
Pattern [info]
[LIVM]-x-[DE]-[LIVMFYT]-[LIVM]-[DE]-x-[LIVM](2)-[DKR](2)-G-x-[LIVMA]-
[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 47 in 47 different sequences
Number of true positive hits 47 in 47 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.92 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
47 sequences

GVPA1_HALSA (P08958), GVPA1_PRIMG (O68680), GVPA1_STRCO (Q9ZC13), 
ยป more

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

GVPA_GEOUR  (A5G5E4), GVPS_STRX0  (A0A1Q5LQW7)

		
PDB
[Detailed view]
1 PDB

8GBS