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PROSITE entry PS00234


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General information about the entry

Entry name [info] GAS_VESICLE_A_1
Accession [info] PS00234
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE;
13-SEP-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00207

Name and characterization of the entry

Description [info] Gas vesicles protein GVPa signature 1.
Pattern [info] 
[LIVM]-x-[DE]-[LIVMFYT]-[LIVM]-[DE]-x-[LIVM](2)-[DKR](2)-G-x-[LIVMA]-
[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_04 which contains 570'157 sequence entries.


Total number of hits 47 in 47 different sequences
Number of true positive hits 47 in 47 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.92 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 47 sequences 

GVPA1_HALSA (P08958), GVPA1_PRIMG (O68680), GVPA1_STRCO (Q9ZC13), 

GVPA2_HALSA (P08959), GVPA2_PRIMG (O68677), GVPA2_STRCO (Q9RJB4), 
GVPA_ANCAQ  (Q9RH31), GVPA_BRASO  (A4YMQ7), GVPA_CERS1  (A3PPT5), 
GVPA_CERS4  (Q3IWB1), GVPA_CERSK  (B9KU72), GVPA_DACSA  (Q9R5H8), 
GVPA_DOLFA  (P10397), GVPA_HALMT  (P23761), GVPA_HALVU  (O33397), 
GVPA_HALWD  (Q18JA1), GVPA_KORVE  (Q1INZ5), GVPA_MICAN  (B0JPK6), 
GVPA_MICBC  (P08412), GVPA_MICDP  (P07060), GVPA_MYCSJ  (A3PZ32), 
GVPA_MYCSK  (A1UFH1), GVPA_MYCSS  (Q1B9J2), GVPA_NOSP7  (B2J663), 
GVPA_NOSS1  (Q8XFU1), GVPA_PLAAG  (P0A3G0), GVPA_PLARU  (P0A3G1), 
GVPA_PSEGP  (P22453), GVPA_SPICC  (P80997), GVPA_STRX0  (A0A1Q5LR04), 
GVPA_SYNJA  (Q2JW39), GVPA_SYNJB  (Q2JKK1), GVPA_THIPN  (P80998), 
GVPJ1_HALSA (P24374), GVPJ1_STRCO (Q9ZC08), GVPJ2_HALSA (P33956), 
GVPJ2_STRCO (Q9RJA9), GVPJ_DOLFA  (P55147), GVPJ_HALMT  (Q02235), 
GVPJ_NOSS1  (Q8YUT1), GVPJ_PRIMG  (O68669), GVPJ_PSEGP  (Q9AKS3), 
GVPJ_STRX0  (A0A1Q5LRA3), GVPM1_HALSA (P24377), GVPM2_HALSA (P33957), 
GVPM_HALMT  (Q02238), GVPS_PRIMG  (O68671)
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

GVPA_GEOUR  (A5G5E4), GVPS_STRX0  (A0A1Q5LQW7)


				
	

	

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