PROSITE entry PS00236
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry
Entry name [info] | NEUROTR_ION_CHANNEL |
Accession [info] | PS00236 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-NOV-1997 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00209 |
Name and characterization of the entry
Description [info] | Neurotransmitter-gated ion-channels signature. |
Pattern [info] |
C-x-[LIVMFQ]-x-[LIVMF]-x(2)-[FY]-P-x-D-x(3)-C. |
Numerical results [info]
Total number of hits | 252 in 252 different sequences |
Number of true positive hits | 252 in 252 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 4 |
Number of 'partial' sequences | 5 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 98.44 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Site [info] | disulfide at position 1 |
Site [info] | disulfide at position 12 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
252 sequences
5HT3A_CAVPO (O70212), 5HT3A_HUMAN (P46098), 5HT3A_MOUSE (P23979), 5HT3A_RAT (P35563), 5HT3C_HUMAN (Q8WXA8), 5HT3E_HUMAN (A5X5Y0), ACC1_CAEEL (Q21005), ACC2_CAEEL (Q18812), ACC3_CAEEL (G5EDN0), ACH10_CHICK (Q9I8C7), ACH10_HUMAN (Q9GZZ6), ACH10_RAT (Q9JLB5), ACH15_CAEEL (O16926), ACH1_CAEBR (A8WQK3), ACH1_CAEEL (P48180), ACH1_DROME (P09478), ACH1_MANSE (P91766), ACH1_SCHGR (P23414), ACH23_CAEEL (G5EG88), ACH2_CAEEL (P48181), ACH2_DROME (P17644), ACH3_CAEEL (P54244), ACH3_DROME (P04755), ACH4_CAEEL (O76554), ACH4_DROME (P25162), ACH5_CAEEL (Q23022), ACH6_CAEEL (Q9N587), ACH7_CAEEL (Q27218), ACH8_CAEBR (Q60S81), ACH8_CAEEL (Q9U298), ACH91_ONCMY (Q8JFN7), ACH92_ONCMY (Q68RJ7), ACHA2_CHICK (P09480), ACHA2_HUMAN (Q15822), ACHA2_MOUSE (Q91X60), ACHA2_PANTR (Q5IS52), ACHA2_RAT (P12389), ACHA3_BOVIN (Q07263), ACHA3_CARAU (P18845), ACHA3_CHICK (P09481), ACHA3_HUMAN (P32297), ACHA3_MOUSE (Q8R4G9), ACHA3_RAT (P04757), ACHA4_CHICK (P09482), ACHA4_HUMAN (P43681), ACHA4_MOUSE (O70174), ACHA4_MUSPF (Q19AE6), ACHA4_PANTR (Q5IS77), ACHA4_RAT (P09483), ACHA5_BOVIN (Q8SPU7), ACHA5_CHICK (P26152), ACHA5_HUMAN (P30532), ACHA5_MOUSE (Q2MKA5), ACHA5_PANTR (Q5IS51), ACHA5_RAT (P20420), ACHA6_CHICK (P49581), ACHA6_HUMAN (Q15825), ACHA6_MOUSE (Q9R0W9), ACHA6_PANTR (Q5IS76), ACHA6_RAT (P43143), ACHA7_BOVIN (P54131), ACHA7_CHICK (P22770), ACHA7_HUMAN (P36544), ACHA7_MACMU (Q866A2), ACHA7_MOUSE (P49582), ACHA7_RAT (Q05941), ACHA9_CHICK (Q9PTS8), ACHA9_HUMAN (Q9UGM1), ACHA9_RAT (P43144), ACHAA_XENLA (P22456), ACHAB_XENLA (P05377), ACHA_BOVIN (P02709), ACHA_CHICK (P09479), ACHA_CRORS (P54248), ACHA_DANRE (Q98880), ACHA_ERICO (P54249), ACHA_FELCA (P54250), ACHA_HERIC (P54251), ACHA_HUMAN (P02708), ACHA_MOUSE (P04756), ACHA_NAJNA (P14143), ACHA_NATTE (P14144), ACHA_RAT(P25108), ACHA_TETCF (P02710), ACHA_TORMA (P02711), ACHB2_CARAU (P19370), ACHB2_CHICK (P09484), ACHB2_HUMAN (P17787), ACHB2_MOUSE (Q9ERK7), ACHB2_RAT (P12390), ACHB3_CHICK (P43679), ACHB3_HUMAN (Q05901), ACHB3_MOUSE (Q8BMN3), ACHB3_PANTR (Q5IS75), ACHB3_RAT (P12391), ACHB4_BOVIN (Q8SPU6), ACHB4_CHICK (P26153), ACHB4_HUMAN (P30926), ACHB4_MOUSE (Q8R493), ACHB4_RAT (P12392), ACHB_BOVIN (P04758), ACHB_HUMAN (P11230), ACHB_MOUSE (P09690), ACHB_RAT(P25109), ACHB_TETCF (P02712), ACHB_XENLA (P49579), ACHD_BOVIN (P04759), ACHD_CHICK (P02717), ACHD_HUMAN (Q07001), ACHD_MOUSE (P02716), ACHD_RAT(P25110), ACHD_TETCF (P02718), ACHD_XENLA (P09628), ACHE_BOVIN (P02715), ACHE_HUMAN (Q04844), ACHE_MOUSE (P20782), ACHE_RAT(P09660), ACHE_XENLA (P49580), ACHG_BOVIN (P13536), ACHG_CHICK (P02713), ACHG_HUMAN (P07510), ACHG_MOUSE (P04760), ACHG_RAT(P18916), ACHG_TETCF (P02714), ACHG_XENLA (P05376), ACHN2_CARAU (P13908), ACHN3_CARAU (P18257), ACHX_ONCVO (P54247), ACR2_CAEEL (P48182), ACR3_CAEEL (Q93149), ACR5_CAEEL (P54246), ACR7_CAEEL (P45963), ARKA_DICDI (Q54HC6), CRFM7_HUMAN (Q494W8), CUP4_CAEBR (A8XF54), CUP4_CAEEL (P34271), GBR1_CAEEL (G5ECJ0), GBRA1_BOVIN (P08219), GBRA1_CHICK (P19150), GBRA1_HUMAN (P14867), GBRA1_MACFA (Q4R534), GBRA1_MOUSE (P62812), GBRA1_PONAB (Q5R6B2), GBRA1_RAT (P62813), GBRA2_BOVIN (P10063), GBRA2_HUMAN (P47869), GBRA2_MOUSE (P26048), GBRA2_PONAB (Q5RCC5), GBRA2_RAT (P23576), GBRA3_BOVIN (P10064), GBRA3_HUMAN (P34903), GBRA3_MOUSE (P26049), GBRA3_RAT (P20236), GBRA4_BOVIN (P20237), GBRA4_HUMAN (P48169), GBRA4_MOUSE (Q9D6F4), GBRA4_RAT (P28471), GBRA5_BOVIN (Q08E50), GBRA5_HUMAN (P31644), GBRA5_MOUSE (Q8BHJ7), GBRA5_RAT (P19969), GBRA6_CHICK (Q90845), GBRA6_HUMAN (Q16445), GBRA6_MOUSE (P16305), GBRA6_RAT (P30191), GBRAL_DROME (Q24352), GBRB1_BOVIN (P08220), GBRB1_HUMAN (P18505), GBRB1_MOUSE (P50571), GBRB1_RAT (P15431), GBRB2_BOVIN (P0C2W5), GBRB2_HUMAN (P47870), GBRB2_MACMU (D1LYT2), GBRB2_MOUSE (P63137), GBRB2_RAT (P63138), GBRB3_CHICK (P19019), GBRB3_DROME (Q08832), GBRB3_HUMAN (P28472), GBRB3_MOUSE (P63080), GBRB3_RAT (P63079), GBRB4_CHICK (P24045), GBRB_CAEEL (O18276), GBRB_DROME (P25123), GBRB_DROSI (Q9BLY8), GBRB_LYMST (P26714), GBRB_MUSDO (Q75NA5), GBRD_HUMAN (O14764), GBRD_MOUSE (P22933), GBRD_RAT(P18506), GBRE_HUMAN (P78334), GBRE_RAT(Q9ES14), GBRG1_HUMAN (Q8N1C3), GBRG1_MOUSE (Q9R0Y8), GBRG1_RAT (P23574), GBRG2_BOVIN (P22300), GBRG2_CHICK (P21548), GBRG2_HUMAN (P18507), GBRG2_MOUSE (P22723), GBRG2_PONAB (Q5REA1), GBRG2_RAT (P18508), GBRG3_HUMAN (Q99928), GBRG3_MOUSE (P27681), GBRG3_RAT (P28473), GBRG4_CHICK (P34904), GBRP_BOVIN (Q5EA06), GBRP_HUMAN (O00591), GBRP_MOUSE (Q8QZW7), GBRP_RAT(O09028), GBRR1_HUMAN (P24046), GBRR1_MOUSE (P56475), GBRR1_RAT (P50572), GBRR2_BOVIN (Q0II76), GBRR2_HUMAN (P28476), GBRR2_MOUSE (P56476), GBRR2_RAT (P47742), GBRR3_HUMAN (A8MPY1), GBRR3_RAT (P50573), GBRT_HUMAN (Q9UN88), GBRT_MOUSE (Q9JLF1), GLRA1_BOVIN (P57695), GLRA1_DANRE (O93430), GLRA1_HUMAN (P23415), GLRA1_MOUSE (Q64018), GLRA1_RAT (P07727), GLRA2_DANRE (F1R8P4), GLRA2_HUMAN (P23416), GLRA2_MOUSE (Q7TNC8), GLRA2_RAT (P22771), GLRA3_HUMAN (O75311), GLRA3_MOUSE (Q91XP5), GLRA3_RAT (P24524), GLRA4_MOUSE (Q61603), GLRB4_CAEEL (Q09453), GLRB_BOVIN (Q9GJS9), GLRB_HUMAN (P48167), GLRB_MOUSE (P48168), GLRB_RAT(P20781), GLUCB_CAEEL (Q17328), GLUCB_HAECO (P91730), GLUCL_CAEEL (G5EBR3), GLUCL_DROME (Q94900), LGC46_CAEEL (Q95Y52), LGC4_CAEBR (A8XNX8), LGC4_CAEEL (P54245), LGC50_CAEEL (P41849), MOD1_CAEEL (Q9GQ00), PBO5_CAEEL (G5ECT0), PBO6_CAEEL (Q19351), PHCL2_ANOGA (A0A1S4H2E2), PHCL2_DROME (Q9V9Y4), ZACN_CANLF (Q866Y9), ZACN_HUMAN (Q401N2)» more
|
UniProtKB/Swiss-Prot False negative sequences |
4 sequences
5HT3B_HUMAN (O95264), 5HT3B_MOUSE (Q9JHJ5), 5HT3B_RAT (Q9JJ16), 5HT3D_HUMAN (Q70Z44)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
5 sequences
ACHA_ELEEL (P09688), ACHB_CHICK (P16005), ACHB_ELEEL (P09689), ACHD_ELEEL (P09691), ACHG_ELEEL (P09692)» more |
PDB [Detailed view] |
154 PDB
2BG9; 2QC1; 3JAD; 3JAE; 3JAF; 3RHW; 3RI5; 3RIA; 3RIF; 4AQ5; 4AQ9; 4BOG; 4BOI; 4BON; 4BOO; 4BOR; 4BOT; 4COF; 4D01; 4PIR; 4TNV; 4TNW; 4UXU; 4UY2; 5BKF; 5BKG; 5CFB; 5FJV; 5HBT; 5HBV; 5KXI; 5O8F; 5OJM; 5TIN; 5TIO; 5VDH; 5VDI; 6A96; 6BE1; 6CNJ; 6CNK; 6D6T; 6D6U; 6DG7; 6DG8; 6DW0; 6DW1; 6HIN; 6HIO; 6HIQ; 6HUG; 6HUJ; 6HUK; 6HUO; 6HUP; 6HY7; 6I53; 6NP0; 6PLO; 6PLP; 6PLQ; 6PLR; 6PLS; 6PLT; 6PLU; 6PLV; 6PLW; 6PLX; 6PLY; 6PLZ; 6PM0; 6PM1; 6PM2; 6PM3; 6PM4; 6PM5; 6PM6; 6PV7; 6PV8; 6PXD; 6QFA; 6UBS; 6UBT; 6UD3; 6UR8; 6USF; 6UWZ; 6VM0; 6VM2; 6VM3; 6W1J; 6W1M; 6W1Y; 6X3S; 6X3T; 6X3U; 6X3V; 6X3W; 6X3X; 6X3Z; 6X40; 6Y1Z; 7EKI; 7EKP; 7EKT; 7KOO; 7KOQ; 7KOX; 7KUY; 7L31; 7M6M; 7M6N; 7M6O; 7M6P; 7M6Q; 7M6R; 7M6S; 7PBD; 7PBZ; 7PC0; 7QKO; 7QL5; 7QL6; 7QN5; 7QN6; 7QN7; 7QN8; 7QN9; 7QNA; 7QNB; 7QNC; 7QND; 7QNE; 7SMM; 7SMQ; 7SMR; 7SMS; 7SMT; 7T0W; 7T0Z; 7TU9; 7TVI; 7U2M; 7U2N; 7U2O; 7Z14; 8A5U; 8DD2; 8DD3; 8ESK; 8F2S; 8F6Y; 8F6Z; 8FE1 » more |