PROSITE entry PS00242
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General information about the entry
Entry name [info] | INTEGRIN_ALPHA |
Accession [info] | PS00242 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-JUN-1994 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00215 |
Name and characterization of the entry
Description [info] | Integrins alpha chain signature. |
Pattern [info] |
[FYWS]-[RK]-x-G-F-F-x-R. |
Numerical results [info]
Total number of hits | 64 in 64 different sequences |
Number of true positive hits | 53 in 53 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 11 in 11 different sequences |
Number of false negative sequences | 3 |
Number of 'partial' sequences | 3 |
Precision (true positives / (true positives + false positives)) | 82.81 % |
Recall (true positives / (true positives + false negatives)) | 94.64 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
53 sequences
INA1_CAEEL (Q03600), ITA1_DROME (Q24247), ITA1_HUMAN (P56199), ITA1_MOUSE (Q3V3R4), ITA1_RAT(P18614), ITA2B_HUMAN (P08514), ITA2B_MOUSE (Q9QUM0), ITA2B_PAPCY (P53711), ITA2_BOVIN (P53710), ITA2_DROME (P12080), ITA2_HUMAN (P17301), ITA2_MOUSE (Q62469), ITA3_BOVIN (F1MMS9), ITA3_CRIGR (P17852), ITA3_DROME (O44386), ITA3_HUMAN (P26006), ITA3_MOUSE (Q62470), ITA4_DROME (Q9V7A4), ITA4_HUMAN (P13612), ITA4_MOUSE (Q00651), ITA4_XENLA (Q91687), ITA5_HUMAN (P08648), ITA5_MOUSE (P11688), ITA5_XENLA (Q06274), ITA6_CHICK (P26007), ITA6_HUMAN (P23229), ITA6_MOUSE (Q61739), ITA7_HUMAN (Q13683), ITA7_MOUSE (Q61738), ITA7_RAT(Q63258), ITA8_CHICK (P26009), ITA8_HUMAN (P53708), ITA8_MOUSE (A2ARA8), ITA9_HUMAN (Q13797), ITA9_MOUSE (B8JK39), ITAD_HUMAN (Q13349), ITAD_MOUSE (Q3V0T4), ITAD_RAT(Q9QYE7), ITAE_HUMAN (P38570), ITAE_MOUSE (Q60677), ITAL_BOVIN (P61625), ITAL_HUMAN (P20701), ITAL_MOUSE (P24063), ITAM_HUMAN (P11215), ITAM_MOUSE (P05555), ITAV_BOVIN (P80746), ITAV_CHICK (P26008), ITAV_HUMAN (P06756), ITAV_MOUSE (P43406), ITAX_HUMAN (P20702), ITAX_MOUSE (Q9QXH4), PAT2_CAEBR (A8X3A7), PAT2_CAEEL (P34446)» more
|
UniProtKB/Swiss-Prot False negative sequences |
3 sequences
ITA10_HUMAN (O75578), ITA11_HUMAN (Q9UKX5), ITA11_MOUSE (P61622) |
UniProtKB/Swiss-Prot 'Partial' sequences |
3 sequences
ITA1_CHICK (Q90615), ITA5_BOVIN (Q27977), ITAM_CAVPO (P11578) |
UniProtKB/Swiss-Prot False positive sequences |
11 sequences
ALT5_ALTAL (A0A3G9H9H1), GRK1_CAEBR (Q622Z7), GRK1_CAEEL (Q09537), NAAT1_DROAN (B3MRS1), NAAT1_DROER (B3NV41), NAAT1_DROME (Q9W4C5), NAAT1_DROSI (B4R4T6), NAAT1_DROYA (B4PZQ4), POM1_SCHPO (Q09690), UCSM_ACRSP (A0A411KUQ2), Y736_HAEIN (P44849)» more |
PDB [Detailed view] |
18 PDB
1KUP; 1KUZ; 2K1A; 2K9J; 2KNC; 2L8S; 2M3E; 2MTP; 2N9Y; 6UJA; 6UJB; 6UJC; 7KN0; 7LA4; 7NWL; 7NXD; 7SC4; 7SFT » more |