PROSITE entry PS00242
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General information about the entry
Entry name [info] | INTEGRIN_ALPHA |
Accession [info] | PS00242 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-JUN-1994 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00215 |
Name and characterization of the entry
Description [info] | Integrins alpha chain signature. |
Pattern [info] |
[FYWS]-[RK]-x-G-F-F-x-R. |
Numerical results [info]
Total number of hits | 64 in 64 different sequences |
Number of true positive hits | 53 in 53 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 11 in 11 different sequences |
Number of false negative sequences | 3 |
Number of 'partial' sequences | 3 |
Precision (true positives / (true positives + false positives)) | 82.81 % |
Recall (true positives / (true positives + false negatives)) | 94.64 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
53 sequences
INA1_CAEEL (Q03600 ), ITA1_DROME (Q24247 ), ITA1_HUMAN (P56199 ), ITA1_MOUSE (Q3V3R4 ), ITA1_RAT (P18614 ), ITA2B_HUMAN (P08514 ), ITA2B_MOUSE (Q9QUM0 ), ITA2B_PAPCY (P53711 ), ITA2_BOVIN (P53710 ), ITA2_DROME (P12080 ), ITA2_HUMAN (P17301 ), ITA2_MOUSE (Q62469 ), ITA3_BOVIN (F1MMS9 ), ITA3_CRIGR (P17852 ), ITA3_DROME (O44386 ), ITA3_HUMAN (P26006 ), ITA3_MOUSE (Q62470 ), ITA4_DROME (Q9V7A4 ), ITA4_HUMAN (P13612 ), ITA4_MOUSE (Q00651 ), ITA4_XENLA (Q91687 ), ITA5_HUMAN (P08648 ), ITA5_MOUSE (P11688 ), ITA5_XENLA (Q06274 ), ITA6_CHICK (P26007 ), ITA6_HUMAN (P23229 ), ITA6_MOUSE (Q61739 ), ITA7_HUMAN (Q13683 ), ITA7_MOUSE (Q61738 ), ITA7_RAT (Q63258 ), ITA8_CHICK (P26009 ), ITA8_HUMAN (P53708 ), ITA8_MOUSE (A2ARA8 ), ITA9_HUMAN (Q13797 ), ITA9_MOUSE (B8JK39 ), ITAD_HUMAN (Q13349 ), ITAD_MOUSE (Q3V0T4 ), ITAD_RAT (Q9QYE7 ), ITAE_HUMAN (P38570 ), ITAE_MOUSE (Q60677 ), ITAL_BOVIN (P61625 ), ITAL_HUMAN (P20701 ), ITAL_MOUSE (P24063 ), ITAM_HUMAN (P11215 ), ITAM_MOUSE (P05555 ), ITAV_BOVIN (P80746 ), ITAV_CHICK (P26008 ), ITAV_HUMAN (P06756 ), ITAV_MOUSE (P43406 ), ITAX_HUMAN (P20702 ), ITAX_MOUSE (Q9QXH4 ), PAT2_CAEBR (A8X3A7 ), PAT2_CAEEL (P34446 )» more
|
UniProtKB/Swiss-Prot False negative sequences |
3 sequences
ITA10_HUMAN (O75578 ), ITA11_HUMAN (Q9UKX5 ), ITA11_MOUSE (P61622 ) |
UniProtKB/Swiss-Prot 'Partial' sequences |
3 sequences
ITA1_CHICK (Q90615 ), ITA5_BOVIN (Q27977 ), ITAM_CAVPO (P11578 ) |
UniProtKB/Swiss-Prot False positive sequences |
11 sequences
ALT5_ALTAL (A0A3G9H9H1), GRK1_CAEBR (Q622Z7 ), GRK1_CAEEL (Q09537 ), NAAT1_DROAN (B3MRS1 ), NAAT1_DROER (B3NV41 ), NAAT1_DROME (Q9W4C5 ), NAAT1_DROSI (B4R4T6 ), NAAT1_DROYA (B4PZQ4 ), POM1_SCHPO (Q09690 ), UCSM_ACRSP (A0A411KUQ2), Y736_HAEIN (P44849 )» more |
PDB [Detailed view] |
16 PDB
1KUP; 1KUZ; 2K1A; 2K9J; 2KNC; 2L8S; 2M3E; 2MTP; 2N9Y; 6UJA; 6UJB; 6UJC; 7KN0; 7LA4; 7NWL; 7NXD » more |