PROSITE entry PS00244
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Direct ScanProsite submission
General information about the entry
| Entry name [info] | REACTION_CENTER |
| Accession [info] | PS00244 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-DEC-2001 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00217 |
Name and characterization of the entry
| Description [info] | Photosynthetic reaction center proteins signature. |
| Pattern [info] |
[NQH]-x(4)-P-x-H-x(2)-[SAG]-x(11)-[SAGC]-x-H-[SAG](2). |
Numerical results [info]
| Total number of hits | 409 in 409 different sequences |
| Number of true positive hits | 409 in 409 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 7 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 98.32 % |
Comments [info]
| Taxonomic range [info] | Bacteriophages, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Site [info] | magnesium at position 5 |
| Site [info] | iron at position 11 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
409 sequences
CHLF_CHLFP (P0DOC9), CHLF_SYNS7 (B4WP19), PSBA1_ACAM1 (B0CB14), PSBA1_GLOVI (Q7M7A9), PSBA1_NOSS1 (P46242), PSBA1_PARMW (Q7TTJ7), PSBA1_PICP2 (B1XM24), PSBA1_SYNE7 (P04996), PSBA1_SYNEL (P0A445), PSBA1_SYNJA (Q2JTJ2), PSBA1_SYNP6 (Q5N5R2), PSBA1_SYNPW (A5GIM7), PSBA1_SYNR3 (A5GTY4), PSBA1_SYNS3 (Q0I7J2), PSBA1_SYNS9 (Q3AYB8), PSBA1_SYNSC (Q3AM89), PSBA1_SYNY3 (P07826), PSBA1_THEVB (P0A444), PSBA1_TRIEI (Q11A00), PSBA1_TRIV2 (Q3MCT0), PSBA2_ACAM1 (A5A8K9), PSBA2_GLOVI (Q7NJX5), PSBA2_NOSS1 (P31694), PSBA2_PARMW (Q7U669), PSBA2_PICP2 (B1XMC3), PSBA2_SYNE7 (P04997), PSBA2_SYNEL (P0A447), PSBA2_SYNJB (Q2JP67), PSBA2_SYNP6 (Q5N4D2), PSBA2_SYNPW (A5GJU5), PSBA2_SYNR3 (A5GTY5), PSBA2_SYNS3 (Q0I912), PSBA2_SYNS9 (Q3AV15), PSBA2_SYNSC (Q3AKT2), PSBA2_SYNY3 (P16033), PSBA2_THEVB (P0A446), PSBA2_TRIEI (Q10VK7), PSBA2_TRIV2 (Q3MAB1), PSBA3_GLOVI (Q7NH81), PSBA3_NOSS1 (Q8YQS7), PSBA3_PARMW (Q7U4Z3), PSBA3_PICP2 (B1XIP3), PSBA3_SYNJA (Q2JTM8), PSBA3_SYNP6 (Q5N337), PSBA3_SYNS3 (Q0I910), PSBA3_THEVB (Q8DIV4), PSBA3_TRIV2 (Q3MB78), PSBA4_TRIV2 (Q3M5L6), PSBA_ACOCL (Q3V554), PSBA_ADICA (Q85C23), PSBA_AETCO (A4QJ96), PSBA_AETGR (A4QJI0), PSBA_AGRST (A1E9Y8), PSBA_ALETA (Q9TM69), PSBA_AMAHY (P02956), PSBA_AMBTC (Q70Y17), PSBA_ANEMR (B0YPN1), PSBA_ANGEV (A2T309), PSBA_ANTAG (Q85BH5), PSBA_ANTSP (P24625), PSBA_ARAHI (A4QJZ9), PSBA_ARATH (P83755), PSBA_ATRBE (Q7FNT3), PSBA_BARVE (A4QK85), PSBA_BIGNA (Q06J41), PSBA_BRANA (P18290), PSBA_BUMFI (P48265), PSBA_BUXMI (A6MM16), PSBA_CALFG (Q7YJY8), PSBA_CAPBU (A4QKH2), PSBA_CARPA (B1A915), PSBA_CERDE (A8SE40), PSBA_CHAGL (Q8M9W3), PSBA_CHAVU (Q1ACM1), PSBA_CHLAT (Q19VC4), PSBA_CHLEL (P35860), PSBA_CHLMO (P09752), PSBA_CHLRE (P07753), PSBA_CHLSC (A6MMA2), PSBA_CHLVU (P56318), PSBA_CITSI (Q09MJ8), PSBA_COFAR (A0A315), PSBA_CONCI (Q9T351), PSBA_CONJP (Q9TNF8), PSBA_CROS5 (P51759), PSBA_CRUWA (A4QKR1), PSBA_CRYJA (B1VKF9), PSBA_CUCSA (Q2QDA8), PSBA_CUSEX (A8W3A5), PSBA_CUSGR (A7M8Y6), PSBA_CUSOB (A8W3H2), PSBA_CUSRE (P32036), PSBA_CYACA (O19895), PSBA_CYAM1 (Q85G59), PSBA_CYAPA (P12719), PSBA_CYCTA (A6H5E4), PSBA_DAUCA (Q0G9Y2), PSBA_DIOEL (A6MMI8), PSBA_DRANE (A4QL00), PSBA_DRIGR (Q06H17), PSBA_DUMHI (Q9TNF7), PSBA_ECTSI (P24726), PSBA_EMIHU (Q4G3F2), PSBA_EUCGG (Q49L18), PSBA_EUGGR (P06631), PSBA_GALSU (P24725), PSBA_GNEPA (A6BM28), PSBA_GOSBA (A0ZZ15), PSBA_GOSHI (P69564), PSBA_GRATL (Q6B929), PSBA_GUITH (O78446), PSBA_HELAN (Q1KXX9), PSBA_HETAK (Q32389), PSBA_HETNI (Q9MSC0), PSBA_HETPY (Q9MSC1), PSBA_HETRO (Q9MSC2), PSBA_HETTR (Q9XQV1), PSBA_HORVU (P05337), PSBA_HUPLU (Q5SCW8), PSBA_ILLOL (A6MMS4), PSBA_IPOPU (A7Y395), PSBA_JASNU (Q06RF1), PSBA_KARMI (Q9TJ82), PSBA_LACSA (P69557), PSBA_LANPU (P27201), PSBA_LEMMI (A9L976), PSBA_LEPVR (A4QL86), PSBA_LIRTU (Q0G9N9), PSBA_LOBMA (A4QLH5), PSBA_LOLPR (A8Y9F0), PSBA_LOTJA (Q9BBU3), PSBA_MAGFP (O98736), PSBA_MAIZE (P48183), PSBA_MANES (B1NWD0), PSBA_MARPO (P06402), PSBA_MASLA (Q9S3W5), PSBA_MEDSA (P04998), PSBA_MESVI (Q9MUW0), PSBA_MICAE (P51764), PSBA_MICAN (B0JIS8), PSBA_MICDP (P07063), PSBA_MORIN (Q09X37), PSBA_NANDO (Q09FY1), PSBA_NASOF (A4QLR3), PSBA_NEOYE (Q1XDS5), PSBA_NEPOL (Q9TL35), PSBA_NICDE (P69561), PSBA_NICPL (P69562), PSBA_NICSY (Q3C1G3), PSBA_NICTO (Q33C59), PSBA_NYMAL (Q6EW68), PSBA_OENAR (B0Z4K6), PSBA_OENBI (B0Z4U0), PSBA_OENEH (P83756), PSBA_OENGL (B0Z524), PSBA_OENPA (B0Z5A8), PSBA_OLIPU (A4QJR4), PSBA_OLTVI (Q20ET2), PSBA_ORYNI (Q6ENJ7), PSBA_ORYSA (P0C432), PSBA_ORYSI (P0C433), PSBA_ORYSJ (P0C434), PSBA_OSTTA (Q0P3J1), PSBA_OXYRB (P69565), PSBA_PALPL (O98733), PSBA_PANGI (Q68S26), PSBA_PEA(P06585), PSBA_PELHO (Q06FY1), PSBA_PETHY (P04999), PSBA_PHAAO (Q3BAR4), PSBA_PHATC (A0T0G9), PSBA_PHAVU (Q01366), PSBA_PICAB (P50155), PSBA_PINCO (P69550), PSBA_PINKO (Q85WS3), PSBA_PINTH (P69551), PSBA_PIPCE (Q06GT0), PSBA_PLAOC (Q09G66), PSBA_PLETE (A6YGB8), PSBA_POPAL (Q14FH6), PSBA_POPDE (P36491), PSBA_POPTR (A4GYN9), PSBA_PORPU (P51212), PSBA_PROHO (P15191), PSBA_PROM0 (A3PAU3), PSBA_PROM1 (A2C057), PSBA_PROM2 (A8G5N5), PSBA_PROM3 (A2C6Q1), PSBA_PROM5 (A2BUK1), PSBA_PROM9 (Q31A92), PSBA_PROMA (P46895), PSBA_PROMC (Q9TM72), PSBA_PROMM (Q7TTH6), PSBA_PROMP (Q7V365), PSBA_PROMS (A2BP21), PSBA_PROMT (Q46JV2), PSBA_PSINU (Q8WI36), PSBA_RHDSA (A6MVT2), PSBA_SACHY (Q6L3B5), PSBA_SACOF (P0C157), PSBA_SECCE (P10510), PSBA_SELUN (Q2WGI0), PSBA_SINAL (P11848), PSBA_SOLBU (Q2MIK7), PSBA_SOLLC (Q2MIC0), PSBA_SOLNI (P69563), PSBA_SOLTU (Q2VEJ6), PSBA_SORBI (A1E9Q4), PSBA_SOYBN (P02957), PSBA_SPIOL (P69560), PSBA_STAPU (Q32RX1), PSBA_STIHE (Q06SD2), PSBA_SYNY4 (P14660), PSBA_TETOB (Q1KVU8), PSBA_THAPS (A0T0W2), PSBA_THEVL (P51765), PSBA_TOBAC (P69556), PSBA_TRIAZ (P29270), PSBA_TRICV (P49460), PSBA_TUPAK (Q3ZJ60), PSBA_VICFA (P13910), PSBA_VIGUN (Q33282), PSBA_VITVI (Q0ZJ40), PSBA_WHEAT (P12463), PSBA_ZYGCR (Q32RM3), PSBD1_ACAM1 (B0C1V6), PSBD1_SYNP6 (Q5N3Q7), PSBD2_ACAM1 (B0C3P0), PSBD2_SYNP6 (Q5MZ82), PSBD_ACOCI (Q4FFP4), PSBD_ACOCL (Q3V539), PSBD_ADICA (Q85FM2), PSBD_AETCO (A4QJB0), PSBD_AETGR (A4QJJ4), PSBD_AGRST (A1E9Z3), PSBD_AMBTC (Q70Y08), PSBD_ANGEV (A2T330), PSBD_ANTAG (Q85AC9), PSBD_ANTMA (P69685), PSBD_ARAHI (A4QK13), PSBD_ARATH (P56761), PSBD_ATRBE (Q8S8X8), PSBD_BARVE (A4QKA0), PSBD_BIGNA (Q06J67), PSBD_BPSYP (Q7Y4H2), PSBD_BRADI (B3TNB8), PSBD_BUXMI (A6MM31), PSBD_CALFG (Q7YJX7), PSBD_CAPBU (A4QKI7), PSBD_CARPA (B1A930), PSBD_CERDE (A8SE98), PSBD_CHAGL (Q8M9W4), PSBD_CHAVU (Q1ACJ7), PSBD_CHLAT (Q19VC7), PSBD_CHLRE (P06007), PSBD_CHLSC (A6MMB7), PSBD_CHLVU (P56319), PSBD_CICAR (B5LMM1), PSBD_CITSI (Q09MI3), PSBD_COFAR (A0A330), PSBD_CROS5 (B1WQ89), PSBD_CRUWA (A4QKS6), PSBD_CRYJA (B1VKH0), PSBD_CUCSA (Q4VZN8), PSBD_CUSEX (A8W3B9), PSBD_CUSGR (A7M8Z6), PSBD_CUSOB (A8W3I2), PSBD_CUSRE (A7M961), PSBD_CUSSA (Q49CA8), PSBD_CYACA (Q9TM47), PSBD_CYAM1 (Q85G27), PSBD_CYAPA (P48079), PSBD_CYCTA (A6H5G6), PSBD_DAUCA (Q0G9W7), PSBD_DIOEL (A6MMK2), PSBD_DRANE (A4QL14), PSBD_DRIGR (Q06H02), PSBD_EMIHU (Q4G395), PSBD_EUCGG (Q49L03), PSBD_EUGGR (P31557), PSBD_FAGEA (B2XWK0), PSBD_GALSU (P28253), PSBD_GOSBA (A0ZZ30), PSBD_GOSHI (Q2L902), PSBD_GRATL (Q6B918), PSBD_GUIAB (B2LMI8), PSBD_GUITH (O78427), PSBD_HELAN (Q1KXW4), PSBD_HETA2 (B2XT21), PSBD_HETA4 (B2XTH7), PSBD_HORVU (P11849), PSBD_ILLOL (A6MMT9), PSBD_IPOPU (A7Y3C4), PSBD_JASNU (Q06RD6), PSBD_LACSA (Q56P05), PSBD_LEMMI (A9L991), PSBD_LEPVR (A4QLA1), PSBD_LIRTU (Q0G9M4), PSBD_LOBMA (A4QLI9), PSBD_LOLPR (A8Y9F5), PSBD_LOTJA (Q9BBT0), PSBD_MAIZE (P48184), PSBD_MANES (B1NWE5), PSBD_MARPO (P06404), PSBD_MESVI (Q9MUW2), PSBD_MORIN (Q09X22), PSBD_NANDO (Q09FW6), PSBD_NASOF (A4QLS8), PSBD_NEOYE (Q1XDD0), PSBD_NEPOL (Q9TL00), PSBD_NICSY (Q3C1I4), PSBD_NICTO (Q33C42), PSBD_NOSP7 (B2IVV1), PSBD_NOSS1 (Q8XFA5), PSBD_NUPAD (Q4FFP2), PSBD_NYMAL (Q6EW53), PSBD_OENAR (B0Z4M2), PSBD_OENBI (B0Z4V6), PSBD_OENEH (Q9MTN1), PSBD_OENGL (B0Z540), PSBD_OENPA (B0Z5C4), PSBD_OLIPU (A4QJS8), PSBD_OLTVI (Q20EU7), PSBD_ORYNI (Q6ENJ1), PSBD_ORYSA (P0C435), PSBD_ORYSI (P0C436), PSBD_ORYSJ (P0C437), PSBD_OSTTA (Q0P3Q0), PSBD_PANGI (Q68S11), PSBD_PARMW (Q7TTI2), PSBD_PAUCH (B1X3H4), PSBD_PEA(P06006), PSBD_PELHO (Q06FW1), PSBD_PHAAO (Q3BAP5), PSBD_PHATC (A0T097), PSBD_PHAVU (A4GGA2), PSBD_PHYPA (Q6YXN8), PSBD_PICP2 (P20898), PSBD_PINKO (Q85WW5), PSBD_PINTH (P41644), PSBD_PIPCE (Q06GR5), PSBD_PLAOC (Q09G51), PSBD_PLETE (A6YG76), PSBD_POPAL (Q14FG2), PSBD_POPDE (Q9XQA8), PSBD_POPTR (A4GYQ4), PSBD_PORPU (P51357), PSBD_PROHO (P51766), PSBD_PROMM (Q7V6I0), PSBD_PSINU (Q8WI19), PSBD_RANMC (Q4FFP1), PSBD_SACHY (Q6L3B1), PSBD_SACOF (Q6ENY1), PSBD_SECCE (P10803), PSBD_SOLBU (Q2MIJ2), PSBD_SOLLC (Q2MIA5), PSBD_SOLTU (Q2VEI1), PSBD_SORBI (A1E9Q9), PSBD_SOYBN (Q2PMT8), PSBD_SPIOL (P06005), PSBD_STAPU (Q32RT0), PSBD_STIHE (Q06SH5), PSBD_SYNE7 (P11005), PSBD_SYNJA (Q2JRJ5), PSBD_SYNJB (Q2JKT8), PSBD_SYNPW (A5GMA8), PSBD_SYNR3 (A5GQK3), PSBD_SYNS3 (Q0I6Z7), PSBD_SYNS9 (Q3B038), PSBD_SYNSC (Q3AH25), PSBD_SYNY3 (P09192), PSBD_TETOB (Q1KVW6), PSBD_THAPS (A0T0T0), PSBD_THEVB (Q8CM25), PSBD_THEVL (D0VWR8), PSBD_TOBAC (P69686), PSBD_TRICV (P49478), PSBD_TRIEI (Q116J3), PSBD_TRIV2 (Q3MA59), PSBD_TUPAK (Q3ZJ46), PSBD_VITVI (Q0ZJ25), PSBD_WELMI (B2Y1U5), PSBD_WHEAT (Q36814), PSBD_ZYGCR (Q32RM5), RCEL_ACICY (O66137), RCEL_ACIMU (O66139), RCEL_ACIOR (O66141), RCEL_ALLVD (P51762), RCEL_BLAVI (P06009), RCEL_CERS4 (Q3J1A5), RCEL_CERSP (P0C0Y8), RCEL_CHLAA (P11695), RCEL_PARPM (P51750), RCEL_RHOCA (P19057), RCEL_RHOPA (O83005), RCEL_RHORU (P10717), RCEL_ROSDO (P26280), RCEL_RUBGE (P0DJO2), RCEL_RUBGI (I0HUL5), RCEM_ALLVD (P51763), RCEM_BLAVI (P06010), RCEM_CERS4 (Q3J1A6), RCEM_CERSP (P0C0Y9), RCEM_CHLAA (P09438), RCEM_PARPM (P51751), RCEM_RHOCA (P11847), RCEM_RHORU (P10718), RCEM_ROSDO (P26279), RCEM_RUBGI (P51761)» more
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| UniProtKB/Swiss-Prot False negative sequences |
7 sequences
PSBA1_SYNJB (Q2JPR2), PSBA2_SYNJA (Q2JTT0), PSBA_AMPCA (Q9BBC1), PSBA_AMPOP (Q7HP56), PSBD_BPSYR (Q6H956), PSBD_BPSYS (Q0QZ08), PSBD_BPSYW (Q6H952)» more |
| PDB [Detailed view] |
316 PDB
1AIG; 1AIJ; 1DS8; 1DV3; 1DV6; 1DXR; 1E14; 1E6D; 1F6N; 1FNP; 1FNQ; 1IZL; 1JGW; 1JGX; 1JGY; 1JGZ; 1JH0; 1K6L; 1K6N; 1KBY; 1L9B; 1L9J; 1M3X; 1MPS; 1OGV; 1PCR; 1PRC; 1PSS; 1PST; 1QOV; 1R2C; 1RG5; 1RGN; 1RQK; 1RVJ; 1RY5; 1RZH; 1RZZ; 1S00; 1S5L; 1UMX; 1VRN; 1W5C; 1YF6; 1YST; 1Z9J; 1Z9K; 2AXT; 2BNP; 2BNS; 2BOZ; 2GMR; 2GNU; 2HG3; 2HG9; 2HH1; 2HHK; 2HIT; 2HJ6; 2I5N; 2J8C; 2J8D; 2JBL; 2JIY; 2JJ0; 2PRC; 2RCR; 2UWS; 2UWT; 2UWU; 2UWV; 2UWW; 2UX3; 2UX4; 2UX5; 2UXJ; 2UXK; 2UXL; 2UXM; 2WJM; 2WJN; 2WX5; 2X5U; 2X5V; 3A0B; 3A0H; 3D38; 3DSY; 3DTA; 3DTR; 3DTS; 3DU2; 3DU3; 3DUQ; 3G7F; 3I4D; 3JCU; 3KZI; 3PRC; 3T6D; 3T6E; 3V3Y; 3V3Z; 3WU2; 3ZUM; 3ZUW; 4AC5; 4CAS; 4FBY; 4H99; 4H9L; 4HBH; 4HBJ; 4IL6; 4IN5; 4IN6; 4IN7; 4IXQ; 4IXR; 4LWY; 4N7K; 4N7L; 4PBU; 4PJ0; 4RCR; 4RVY; 4TNH; 4TNI; 4TNJ; 4TNK; 4TQQ; 4UB6; 4UB8; 4V62; 4V82; 4V9G; 4YUU; 5B5E; 5B66; 5E79; 5E7C; 5GTH; 5GTI; 5H2F; 5KAF; 5KAI; 5LRI; 5LSE; 5M7J; 5M7K; 5M7L; 5MDX; 5MX2; 5NJ4; 5O4C; 5O64; 5PRC; 5TIS; 5V2C; 5V33; 5WS5; 5WS6; 5XNL; 5XNM; 5ZZN; 6DHE; 6DHF; 6DHG; 6DHH; 6DHO; 6DHP; 6ET5; 6JLJ; 6JLK; 6JLL; 6JLM; 6JLN; 6JLO; 6JLP; 6KAC; 6KAD; 6KAF; 6PRC; 6W1O; 6W1P; 6W1Q; 6W1R; 6W1T; 6W1U; 6W1V; 6WJ6; 6YP7; 6Z02; 6Z1J; 6Z27; 6Z5R; 6Z5S; 6ZHW; 6ZI4; 6ZI5; 6ZI6; 6ZI9; 6ZIA; 6ZID; 7CJI; 7CJJ; 7COU; 7CZL; 7D1T; 7D1U; 7DXA; 7DXH; 7EDA; 7EQD; 7F0L; 7MH3; 7MH4; 7MH5; 7MH8; 7MH9; 7MHA; 7N8O; 7NHO; 7NHP; 7NHQ; 7OD5; 7OUI; 7P0Q; 7P17; 7P2C; 7PIL; 7PQD; 7PRC; 7Q7F; 7Q7G; 7Q7H; 7Q7J; 7Q7M; 7Q7N; 7Q7O; 7Q7P; 7Q7Q; 7RCV; 7RF1; 7RF2; 7RF3; 7RF4; 7RF5; 7RF6; 7RF7; 7RF8; 7VA9; 7VB9; 7VNM; 7VNY; 7VOR; 7VOT; 7VOY; 7YMI; 7YML; 7YMM; 7YQ2; 7YQ7; 7Z8D; 8AM5; 8ASL; 8B64; 8C29; 8C3F; 8C5X; 8C6K; 8C7C; 8C87; 8C88; 8EZ5; 8F4C; 8F4D; 8F4E; 8F4F; 8F4G; 8F4H; 8F4I; 8F4J; 8F4K; 8GN0; 8GN1; 8GN2; 8IR5; 8IR6; 8IR7; 8IR8; 8IR9; 8IRA; 8IRB; 8IRC; 8IRD; 8IRE; 8IRF; 8IRG; 8IRH; 8IRI; 8IWH; 8KDE; 8R2I; 8TOW; 8VTJ; 8VTK; 8VTL; 8VTM; 8VTN; 8VTO; 8WDU; 8WDV; 8XLP; 8ZEE; 9EVX » more |