PROSITE entry PS00248
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General information about the entry
| Entry name [info] | NGF_1 |
| Accession [info] | PS00248 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-APR-2006 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00221 |
Name and characterization of the entry
| Description [info] | Nerve growth factor family signature. |
| Pattern [info] |
[GSRE]-C-[KRL]-G-[LIVT]-[DE]-x(3)-[YW]-x-S-x-C. |
Numerical results [info]
| Total number of hits | 117 in 117 different sequences |
| Number of true positive hits | 117 in 117 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 1 |
| Number of 'partial' sequences | 27 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 99.15 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Site [info] | disulfide at position 2 |
| Site [info] | disulfide at position 12 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
117 sequences
BDNF_ACRDU (Q1X706), BDNF_ACRJA (Q1X702), BDNF_AILFU (O97759), BDNF_AILME (Q6LCI5), BDNF_ANISC (Q1X700), BDNF_ASPME (Q1HN40), BDNF_BOACO (Q1X708), BDNF_BOVIN (Q95106), BDNF_CALRI (Q1X6Z7), BDNF_CANCA (Q1X707), BDNF_CANLF (Q7YRB4), BDNF_CAVPO (O70183), BDNF_CHABO (Q1X6Z6), BDNF_CHICK (P25429), BDNF_CHISR (Q1HN42), BDNF_CORCI (Q1X711), BDNF_CYLRU (Q1X701), BDNF_CYPCA (Q90322), BDNF_EPICE (Q1X710), BDNF_ERYCC (Q1HN34), BDNF_ERYCN (Q1X6Z8), BDNF_ERYJO (Q1HN32), BDNF_ERYJY (Q1HN36), BDNF_EUNNO (Q1X709), BDNF_EXIPL (Q1X704), BDNF_FELCA (Q9TST3), BDNF_HELMA (O18753), BDNF_HORSE (Q0EAB7), BDNF_HUMAN (P23560), BDNF_LICTR (Q1HN31), BDNF_LIPVE (Q49M28), BDNF_LOXBI (Q1HN33), BDNF_MACLB (P25431), BDNF_MACMU (Q06225), BDNF_MORSI (Q1X703), BDNF_MOUSE (P21237), BDNF_PANTR (Q5IS78), BDNF_PIG(P14082), BDNF_PROLO (O18755), BDNF_PTYMJ (Q8QG74), BDNF_RAJCL (P25430), BDNF_RAMSP (Q1X6Z5), BDNF_RAT(P23363), BDNF_SANME (Q1X705), BDNF_SPECI (Q4L0Y3), BDNF_TROHA (Q1X6Z9), BDNF_URSAR (O18752), BDNF_URSTH (Q3SAT7), BDNF_XENLA (P25432), BDNF_XENUN (Q1HN38), BDNF_XIPMA (Q02193), NGFV1_AZEFE (Q2XXL6), NGFV1_DEMVE (A6MFL5), NGFV1_HOPST (Q3HXY0), NGFV1_NAJSP (Q5YF90), NGFV1_NOTSC (Q3HXY7), NGFV1_OXYMI (Q3HXZ1), NGFV1_PSEAU (Q3HXY3), NGFV1_PSETE (Q3HXY9), NGFV1_TROCA (Q3HXX8), NGFV2_DEMVE (A6MFL6), NGFV2_HOPST (Q3HXX9), NGFV2_NAJSP (Q5YF89), NGFV2_OXYMI (Q3HXZ0), NGFV2_PSEAU (Q3HXY2), NGFV2_PSETE (Q3HXY8), NGFV2_TROCA (Q3HXX7), NGFV3_DEMVE (A6MFL7), NGFV3_NOTSC (Q3HXY5), NGFV3_PSEAU (Q3HXY1), NGFV3_TROCA (Q3HXX6), NGFV4_TROCA (Q3HXX5), NGFV5_TROCA (Q3HXX4), NGFV_AGKCO (B8QCG6), NGFV_BOTJR (Q90W38), NGFV_BUNMU (P34128), NGFV_CRODU (Q9DEZ9), NGFV_CRYNI (Q1W7Q6), NGFV_DABRR (P30894), NGFV_DRYCN (F8RKW5), NGFV_MACLB (P25428), NGFV_NAJAT (P61898), NGFV_NAJKA (P61899), NGFV_NAJNA (P01140), NGFV_OXYSC (Q3I5F4), NGFV_PSEPO (Q3HXY4), NGF_BOVIN (P13600), NGF_CAVPO (P19093), NGF_CHICK (P05200), NGF_DANRE (Q6YBR5), NGF_GORGO (Q9N2F0), NGF_HUMAN (P01138), NGF_MASNA (P20675), NGF_MOUSE (P01139), NGF_PANTR (Q9N2F1), NGF_PIG (Q29074), NGF_PONPY (Q9N2E9), NGF_RAT (P25427), NGF_SAIBB (Q5ISB0), NGF_XENLA (P21617), NGF_XIPMA (P34129), NTF3_BOVIN (Q08DT3), NTF3_CHICK (P25433), NTF3_FELCA (Q9TST2), NTF3_HUMAN (P20783), NTF3_MOUSE (P20181), NTF3_PIG(Q06AV0), NTF3_RAJCL (P25434), NTF3_RAT(P18280), NTF3_XENLA (P25435), NTF4_HUMAN (P34130), NTF4_MACLB (P25436), NTF4_MOUSE (Q80VU4), NTF4_RAT(P34131), NTF4_XENLA (P24727), NTF7_CYPCA (O93474), NTF7_DANRE (O73797)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
1 sequence
NGFV2_NOTSC (Q3HXY6) |
| UniProtKB/Swiss-Prot 'Partial' sequences |
27 sequences
NGFV_BOTCO (P0DMG7), NGFV_ECHOC (P0DMD1), NTF3_ACRDU (Q1X6Y9), NTF3_ACRJA (Q1X6Y5), NTF3_ANISC (Q1X6Y3), NTF3_ASPME (Q1KN21), NTF3_BOACO (Q1X6Z1), NTF3_CALRI (Q1X6Y0), NTF3_CANCA (Q1X6Z0), NTF3_CEREL (Q95150), NTF3_CHABO (Q1X6X9), NTF3_CHISR (Q1KN23), NTF3_CORCI (Q1X6Z4), NTF3_CYLRU (Q1X6Y4), NTF3_EPICE (Q1X6Z3), NTF3_ERYCC (Q1KN16), NTF3_ERYCN (Q1X6Y1), NTF3_ERYJO (Q1KN12), NTF3_EUNNO (Q1X6Z2), NTF3_EXIPL (Q1X6Y7), NTF3_LICTR (Q1KN10), NTF3_LOXBI (Q1KN14), NTF3_MORSI (Q1X6Y6), NTF3_RAMSP (Q1X6X8), NTF3_SANME (Q1X6Y8), NTF3_TROHA (Q1X6Y2), NTF3_XENUN (Q1KN19)» more |
| PDB [Detailed view] |
24 PDB
1B8K; 1B8M; 1B98; 1BET; 1BND; 1BTG; 1HCF; 1NT3; 1SG1; 1SGF; 1WWW; 2IFG; 3BUK; 3IJ2; 4EAX; 4EC7; 4EDW; 4EDX; 4XPJ; 4ZBN; 5JZ7; 5LSD; 6FFY; 6YW8 » more |