PROSITE entry PS00250
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General information about the entry
Entry name [info] | TGF_BETA_1 |
Accession [info] | PS00250 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-APR-1990 DATA UPDATE; 13-SEP-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00223 |
Name and characterization of the entry
Description [info] | TGF-beta family signature. |
Pattern [info] |
[LIVM]-x(2)-P-x(2)-[FY]-x(4)-C-x-G-x-C. |
Numerical results [info]
Total number of hits | 205 in 205 different sequences |
Number of true positive hits | 203 in 203 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 2 in 2 different sequences |
Number of false negative sequences | 23 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 99.02 % |
Recall (true positives / (true positives + false negatives)) | 89.82 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Site [info] | disulfide at position 7 |
Site [info] | disulfide at position 11 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
203 sequences
60A_DROME (P27091), 60A_DROVI (Q24735), BMP10_HUMAN (O95393), BMP10_MOUSE (Q9R229), BMP10_RAT (Q4AEG6), BMP15_BOVIN (Q6PX77), BMP15_HUMAN (O95972), BMP15_MOUSE (Q9Z0L4), BMP15_SHEEP (Q9MZE2), BMP2A_XENLA (P25703), BMP2B_XENLA (P30884), BMP2_CHICK (Q90751), BMP2_DAMDA (O19006), BMP2_HUMAN (P12643), BMP2_MOUSE (P21274), BMP2_RABIT (O46564), BMP2_RAT(P49001), BMP2_TETNG (Q804S2), BMP3_BOVIN (P22444), BMP3_HUMAN (P12645), BMP3_MOUSE (Q8BHE5), BMP3_RAT(P49002), BMP3_XENLA (Q7T2X7), BMP4_BOVIN (Q2KJH1), BMP4_CHICK (Q90752), BMP4_DAMDA (Q29607), BMP4_HUMAN (P12644), BMP4_MOUSE (P21275), BMP4_RABIT (O46576), BMP4_RAT(Q06826), BMP4_SUNMU (Q8MJV5), BMP4_XENLA (P30885), BMP5_HUMAN (P22003), BMP5_MOUSE (P49003), BMP6_HUMAN (P22004), BMP6_MOUSE (P20722), BMP6_RAT(Q04906), BMP7_HUMAN (P18075), BMP7_MOUSE (P23359), BMP7_XENLA (P30886), BMP8A_HUMAN (Q7Z5Y6), BMP8A_MOUSE (P34821), BMP8B_HUMAN (P34820), BMP8B_MOUSE (P55105), DAF7_CAEEL (P92172), DBL1_CAEEL (G5EEL5), DECA_DROME (P07713), DECA_DROPS (P91699), DECA_DROSI (P91706), DECA_TRICA (Q26974), DERR_XENTR (Q66KL4), DSL1_CHICK (P34822), DVR1_DANRE (P35621), DVR1_STRPU (P48969), DVR1_XENLA (P09534), GDF10_BOVIN (Q08DX6), GDF10_HUMAN (P55107), GDF10_MOUSE (P97737), GDF10_RAT (P55108), GDF10_XENLA (Q7T2X6), GDF11_HUMAN (O95390), GDF11_MOUSE (Q9Z1W4), GDF11_RAT (Q9Z217), GDF1_HUMAN (P27539), GDF1_MOUSE (P20863), GDF2_DANRE (F1QWZ4), GDF2_HUMAN (Q9UK05), GDF2_MOUSE (Q9WV56), GDF3_HUMAN (Q9NR23), GDF3_MOUSE (Q07104), GDF3_XENLA (Q9YGV1), GDF5_HUMAN (P43026), GDF5_MOUSE (P43027), GDF6A_DANRE (P85857), GDF6B_DANRE (A8E7N9), GDF6_BOVIN (P55106), GDF6_HUMAN (Q6KF10), GDF6_MOUSE (P43028), GDF6_RAT(Q6HA10), GDF7_CHLAE (Q9BDW8), GDF7_HUMAN (Q7Z4P5), GDF7_MOUSE (P43029), GDF8_AEPME (Q5USV7), GDF8_ANSAN (Q8UWD9), GDF8_ANTAM (Q5USV5), GDF8_BOSGA (Q5USW1), GDF8_BOSIN (Q5RZV4), GDF8_BOVIN (O18836), GDF8_BUBBU (Q6X5V1), GDF8_CANLF (Q6UKZ8), GDF8_CAPHI (Q6T5B8), GDF8_CAPIB (Q5USV9), GDF8_CHICK (O42220), GDF8_COLLI (Q8UWD8), GDF8_COTCO (Q8AVB2), GDF8_DANRE (O42222), GDF8_EPICO (Q5I3Q2), GDF8_EXCCH (Q8UWD7), GDF8_GORGO (A1C2V5), GDF8_HEMJE (Q5USV8), GDF8_HORSE (Q9GM97), GDF8_HUMAN (O14793), GDF8_LEPCA (Q8HY52), GDF8_MACFA (Q95J86), GDF8_MACMU (A1C2U6), GDF8_MELGA (O42221), GDF8_MOUSE (O08689), GDF8_OREMO (Q98TB4), GDF8_PANPA (A1C2U7), GDF8_PANTR (A1C2V0), GDF8_PAPHA (O18828), GDF8_PIG(O18831), GDF8_PONPY (A1C2U3), GDF8_RAT(O35312), GDF8_SHEEP (O18830), GDF8_SYLGR (Q5USV6), GDF8_TAUDE (Q5USW0), GDF8_VULLA (Q6J1J2), GDF8_VULVU (Q6DTL9), GDF9_BOVIN (Q9GK68), GDF9_CAPHI (Q66NC0), GDF9_HUMAN (O60383), GDF9_MOUSE (Q07105), GDF9_PAPAN (A9CB18), GDF9_SHEEP (O77681), INHA_BOVIN (P07994), INHA_CHICK (P43031), INHA_HORSE (P55101), INHA_HUMAN (P05111), INHA_MOUSE (Q04997), INHA_PIG(P04087), INHA_RAT(P17490), INHA_SHEEP (P38440), INHA_TRIVU (O77755), INHBA_BOVIN (P07995), INHBA_FELCA (Q6X2S4), INHBA_HORSE (P55102), INHBA_HUMAN (P08476), INHBA_MOUSE (Q04998), INHBA_PIG (P03970), INHBA_RAT (P18331), INHBA_SHEEP (P43032), INHBB_BOVIN (P42917), INHBB_CHICK (P27093), INHBB_HUMAN (P09529), INHBB_MOUSE (Q04999), INHBB_PIG (P04088), INHBB_RAT (P17491), INHBC_HUMAN (P55103), INHBC_MOUSE (P55104), INHBC_RAT (Q9WUK5), INHBE_HUMAN (P58166), INHBE_MOUSE (O08717), INHBE_RAT (O88959), INHB_DROME (O61643), LFTY1_HUMAN (O75610), LFTY1_MOUSE (Q64280), LFTY2_HUMAN (O00292), LFTY2_MOUSE (P57785), MIS_BOVIN (P03972), MIS_HUMAN (P03971), MIS_MOUSE (P27106), MIS_PIG (P79295), MIS_RAT (P49000), NOD2A_XENLA (Q91620), NOD2B_XENLA (Q90XB7), NOD4A_XENLA (O13048), NOD4B_XENLA (Q90XB8), NODAL_HUMAN (Q96S42), NODAL_MOUSE (P43021), NODAL_XENLA (Q91619), NODAL_XENTR (Q28GB8), SCW_DROME (P54631), TGFB1_BOVIN (P18341), TGFB1_CANLF (P54831), TGFB1_CAVPO (Q9Z1Y6), TGFB1_CHICK (P09531), TGFB1_CHLAE (P09533), TGFB1_CYPCA (Q9PTQ2), TGFB1_HORSE (O19011), TGFB1_HUMAN (P01137), TGFB1_MOUSE (P04202), TGFB1_MUSPF (Q38HS2), TGFB1_ONCMY (O93449), TGFB1_PIG (P07200), TGFB1_RAT (P17246), TGFB1_SHEEP (P50414), TGFB1_XENLA (P16176), TGFB2_BOVIN (P21214), TGFB2_CHICK (P30371), TGFB2_CHLAE (P61811), TGFB2_HUMAN (P61812), TGFB2_MOUSE (P27090), TGFB2_MUSPF (Q38L25), TGFB2_PIG (P09858), TGFB2_RAT (Q07257), TGFB2_XENLA (P17247), TGFB3_CHICK (P16047), TGFB3_HUMAN (P10600), TGFB3_MOUSE (P17125), TGFB3_PIG (P15203), TGFB3_RAT (Q07258), UNIV_STRPU (P48970)» more
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UniProtKB/Swiss-Prot False negative sequences |
23 sequences
ARTN_HUMAN (Q5T4W7), ARTN_MOUSE (Q9Z0L2), ARTN_RAT(Q6AYE8), GDF15_HUMAN (Q99988), GDF15_MOUSE (Q9Z0J7), GDF15_RAT (Q9Z0J6), GDF8_ANAPL (Q8UWE0), GDNF_DANRE (Q98TU0), GDNF_HUMAN (P39905), GDNF_MOUSE (P48540), GDNF_RAT(Q07731), GDNF_XENLA (Q06PM8), INHBA_CHICK (P27092), NOD3A_XENLA (Q91609), NOD3A_XENTR (Q800C0), NOD3B_XENLA (Q91621), NOD3B_XENTR (Q800B9), NOD3C_XENTR (Q800B8), NRTN_HUMAN (Q99748), NRTN_MOUSE (P97463), PSPN_HUMAN (O60542), PSPN_MOUSE (O70300), PSPN_RAT(O70301)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
BMP7_CANLF (P34819) |
UniProtKB/Swiss-Prot False positive sequences |
2 sequences
ACOXL_MOUSE (Q9DBS4), CLPX_MYXXA (Q9X5N1) |
PDB [Detailed view] |
109 PDB
1BMP; 1ES7; 1KLA; 1KLC; 1KLD; 1KTZ; 1LX5; 1LXI; 1M4U; 1NYS; 1NYU; 1REU; 1REW; 1S4Y; 1TFG; 1TGJ; 1TGK; 1WAQ; 1ZKZ; 2ARP; 2ARV; 2B0U; 2BHK; 2GOO; 2H62; 2H64; 2P6A; 2PJY; 2QCQ; 2QCW; 2QJ9; 2QJA; 2QJB; 2R52; 2R53; 2TGI; 3B4V; 3BK3; 3BMP; 3EO1; 3EVS; 3HH2; 3KFD; 3QB4; 3RJR; 3SEK; 4FAO; 4KV5; 4KXZ; 4MID; 4MPL; 4N1D; 4UHY; 4UHZ; 4UI0; 4UI1; 4UI2; 4YCG; 4YCI; 5E4G; 5F3B; 5F3H; 5FFO; 5HK5; 5HLY; 5HLZ; 5HZW; 5I05; 5JHW; 5JI1; 5NTU; 5NXS; 5TX2; 5TX4; 5TX6; 5TY4; 5UHM; 5VQF; 5VQP; 6I9J; 6MAC; 6OMN; 6OMO; 6SF1; 6SF3; 6UJA; 6UMX; 6XM2; 6Y6N; 6Y6O; 6Z3G; 6Z3H; 6Z3J; 6Z3L; 6Z3M; 7AG0; 7L0J; 7MRZ; 7OLY; 7PPA; 7PPB; 7PPC; 7RCO; 7U5O; 7U5P; 7Y1R; 7Y1T; 7ZJF; 8E3G » more |