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PROSITE entry PS00257


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General information about the entry

Entry name [info] BOMBESIN
Accession [info] PS00257
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-APR-1990 DATA UPDATE;
03-MAY-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00230

Name and characterization of the entry

Description [info] Bombesin-like peptides family signature.
Pattern [info] 
W-A-x-G-[SH]-[LF]-M.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_02 which contains 569'516 sequence entries.


Total number of hits 38 in 38 different sequences
Number of true positive hits 36 in 36 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 94.74 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 36 sequences 

ALYT_ALYOB  (P08944    ), BOMB_BOMBO  (P84214    ), BOMB_BOMOR  (P21591    ), 

BOMB_BOMVA  (P84213    ), BOMB_PELRI  (P86026    ), BOMB_RANSH  (P86994    ), 
BOMB_SANVA  (P86483    ), BOML1_BOMVA (P84212    ), BOML2_BOMVA (P84211    ), 
BOML_PSEGU  (P42991    ), GRP_ALLMI   (P31886    ), GRP_BOMOR   (P29007    ), 
GRP_BOVIN   (Q863C3    ), GRP_CANLF   (P08989    ), GRP_CAVPO   (P63152    ), 
GRP_CHICK   (P01295    ), GRP_HUMAN   (P07492    ), GRP_MOUSE   (Q8R1I2    ), 
GRP_ONCMY   (Q9PS30    ), GRP_PELRI   (P23260    ), GRP_PIG     (P63153    ), 
GRP_RAT     (P24393    ), GRP_SCYCA   (P09472    ), GRP_SHEEP   (P47851    ), 
LITL_PHYSA  (P08948    ), LITO_RANAE  (P08945    ), LITP_PHYSA  (P08947    ), 
LITR_PITRO  (P08946    ), NMB_BOVIN   (Q2T9U8    ), NMB_HUMAN   (P08949    ), 
NMB_MOUSE   (Q9CR53    ), NMB_PIG     (P01297    ), NMB_XENLA   (P43443    ), 
RANA_LITPI  (P08950    ), RANC_LITPI  (P08951    ), RANR_GLARU  (P08952    )
» more

UniProtKB/Swiss-Prot
False positive sequences		 2 sequences 

PLB1_CRYNB  (P0CP75    ), PLB1_CRYNJ  (P0CP74    )


				
	

	

		PDB
[Detailed view]		
		
			9 PDB
			


			1C98; 1C9A; 2N0B; 2N0C; 2N0D; 2N0E; 2N0F; 2N0G; 2N0H