PROSITE entry PS00259
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General information about the entry
| Entry name [info] | GASTRIN |
| Accession [info] | PS00259 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-APR-1990 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00232 |
Name and characterization of the entry
| Description [info] | Gastrin / cholecystokinin family signature. |
| Pattern [info] |
Y-x(0,1)-[GD]-[WH]-M-[DR]-F. |
Numerical results [info]
| Total number of hits | 135 in 115 different sequences |
| Number of true positive hits | 134 in 114 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 1 |
| Number of false negative sequences | 10 |
| Number of 'partial' sequences | 1 |
| Precision (true positives / (true positives + false positives)) | 99.26 % |
| Recall (true positives / (true positives + false negatives)) | 93.06 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 4 |
| Site [info] | sulfatation at position 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
114 sequences
ANTR_CHICK (P09859), ANTR_LITCT (P80111), ANTR_TRASC (P80110), CAE11_LITRO (P86506), CAER1_XENLA (P05222), CAER3_XENLA (P05224), CAER4_XENBO (P05226), CAER4_XENLA (P01357), CAER5_XENLA (P05225), CAER_LITPE (P86486), CAER_PHAJA (P86625), CAER_PHYSA (Q7LZC4), CAER_RANXA (P56264), CAE_XENBM (C0HKK7), CAE_XENRU (C0HKM4), CCKNA_XENLA (P50144), CCKNB_XENLA (P50145), CCKN_BOVIN (P41520), CCKN_CANLF (Q9TS44), CCKN_CARAU (O93464), CCKN_CHICK (Q9PU41), CCKN_DASVI (P68125), CCKN_HUMAN (P06307), CCKN_LITCT (P80344), CCKN_MACFA (P23362), CCKN_MACGI (P0C229), CCKN_MOUSE (P09240), CCKN_NOTEU (P68126), CCKN_PAROL (O57312), CCKN_PIG(P01356), CCKN_RAT(P01355), CCKN_STRCA (Q9PU29), CCKN_TRASC (P80345), CCK_PYTMO (Q8JHB9), CCT1_VARVA (E2E4E4), CION_CIOIN (P16240), CSK_CALVO (Q7M3V5), DSK_DROER (B2ZB95), DSK_DROMA (B2ZB96), DSK_DROME (P09040), DSK_DROPS (Q295C6), DSK_DROSE (B2ZB98), DSK_DROSI (B2ZB99), DSK_DROTE (B2ZBA0), DSK_DROYA (B2ZBA1), GAST_BOVIN (P01352), GAST_CANLF (P01353), GAST_CAPHI (P04564), GAST_CAVPO (P06885), GAST_CHICH (P10034), GAST_DIDVI (P33713), GAST_FELCA (P01354), GAST_HORSE (P55885), GAST_HUMAN (P01350), GAST_MACGI (P0C228), GAST_MACMU (P33714), GAST_MOUSE (P48757), GAST_PIG(P01351), GAST_RAT(P04563), GAST_SHEEP (O02686), LOSK_LOCMI (P47733), LSK2_PERAM (P67803), LSK2_RHYMA (P67802), NSK1_SARBU (P41492), NSK2_SARBU (P41493), SK1_APTFU (P85534), SK1_ARCTE (P85539), SK1_BANRO (P85544), SK1_BLACR (P85547), SK1_BLADU (P85550), SK1_BLAGE (P85555), SK1_BLAOR (P85560), SK1_BLEDI (P85566), SK1_CRYDW (P85571), SK1_CRYKY (P85576), SK1_DELRA (B3EWM3), SK1_DERAT (P85598), SK1_DERER (P85586), SK1_DERIN (P85592), SK1_DIPPU (P85603), SK1_ELLSS (P85852), SK1_ERGCA (P85613), SK1_EUBDI (P85619), SK1_EUBPO (P85625), SK1_EUBSB (P85631), SK1_EURFL (P85847), SK1_GROGR (P85640), SK1_GROPO (P85642), SK1_GYNCS (P85850), SK1_GYNLU (P85652), SK1_LUCGR (P85665), SK1_LUCSU (P85671), SK1_LUCVE (P85677), SK1_MASDA (P85683), SK1_NEORO (P85686), SK1_PANSB (P85692), SK1_PANSS (P85698), SK1_PANVI (P85854), SK1_PERAM (P36885), SK1_PERAU (P85704), SK1_PERBR (P85712), SK1_PERFU (P85716), SK1_PERRU (P85722), SK1_POLAY (P85743), SK1_PRIVA (P85749), SK1_PSEBJ (P85753), SK1_PSEFO (P85761), SK1_PSEFV (P85757), SK1_PYCSU (P85765), SK1_RHOPR (P85810), SK1_RHYMA (P04428), SK1_SHELA (P85856), SK1_SYMPA (P85786), SK1_THEPT (P85792)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
10 sequences
CAE12_LITRO (P86507), CAE12_RANCI (P62540), CAE12_RANSP (P62541), CAE21_RANCI (P82087), CAE22_RANCI (P82088), CAE31_RANCI (P82089), CAE32_RANCI (P82090), CAE41_RANCI (P82091), CAE42_RANCI (P82092), SK2_RHOPR (P85811)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
CAER2_XENLA (P05223) |
| UniProtKB/Swiss-Prot False positive sequences |
1 sequence
ATP23_COCIM (Q1E910) |
| PDB [Detailed view] |
10 PDB
5WRJ; 7EZH; 7EZK; 7EZM; 7F8V; 7F8W; 7MBX; 7MBY; 7XOU; 7XOW |