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PROSITE entry PS00259


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General information about the entry

Entry name [info] GASTRIN
Accession [info] PS00259
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-APR-1990 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00232

Name and characterization of the entry

Description [info] Gastrin / cholecystokinin family signature.
Pattern [info]
Y-x(0,1)-[GD]-[WH]-M-[DR]-F.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 135 in 115 different sequences
Number of true positive hits 134 in 114 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 10
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 99.26 %
Recall (true positives / (true positives + false negatives)) 93.06 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 4
Site [info] sulfatation at position 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
114 sequences

ANTR_AQUCT  (P80111), ANTR_CHICK  (P09859), ANTR_TRASC  (P80110), 
CAE11_LITRO (P86506), CAER1_XENLA (P05222), CAER3_XENLA (P05224), 
CAER4_XENBO (P05226), CAER4_XENLA (P01357), CAER5_XENLA (P05225), 
CAER_LITPE  (P86486), CAER_PHAJA  (P86625), CAER_PHYSA  (Q7LZC4), 
CAER_RANXA  (P56264), CAE_XENBM   (C0HKK7), CAE_XENRU   (C0HKM4), 
CCKNA_XENLA (P50144), CCKNB_XENLA (P50145), CCKN_AQUCT  (P80344), 
CCKN_BOVIN  (P41520), CCKN_CANLF  (Q9TS44), CCKN_CARAU  (O93464), 
CCKN_CHICK  (Q9PU41), CCKN_DASVI  (P68125), CCKN_HUMAN  (P06307), 
CCKN_MACFA  (P23362), CCKN_MACGI  (P0C229), CCKN_MOUSE  (P09240), 
CCKN_NOTEU  (P68126), CCKN_PAROL  (O57312), CCKN_PIG(P01356), 
CCKN_RAT(P01355), CCKN_STRCA  (Q9PU29), CCKN_TRASC  (P80345), 
CCK_PYTMO   (Q8JHB9), CCT1_VARVA  (E2E4E4), CION_CIOIN  (P16240), 
CSK_CALVO   (Q7M3V5), DSK_DROER   (B2ZB95), DSK_DROMA   (B2ZB96), 
DSK_DROME   (P09040), DSK_DROPS   (Q295C6), DSK_DROSE   (B2ZB98), 
DSK_DROSI   (B2ZB99), DSK_DROTE   (B2ZBA0), DSK_DROYA   (B2ZBA1), 
GAST_BOVIN  (P01352), GAST_CANLF  (P01353), GAST_CAPHI  (P04564), 
GAST_CAVPO  (P06885), GAST_CHICH  (P10034), GAST_DIDVI  (P33713), 
GAST_FELCA  (P01354), GAST_HORSE  (P55885), GAST_HUMAN  (P01350), 
GAST_MACGI  (P0C228), GAST_MACMU  (P33714), GAST_MOUSE  (P48757), 
GAST_PIG(P01351), GAST_RAT(P04563), GAST_SHEEP  (O02686), 
LOSK_LOCMI  (P47733), LSK2_PERAM  (P67803), LSK2_RHYMA  (P67802), 
NSK1_SARBU  (P41492), NSK2_SARBU  (P41493), SK1_APTFU   (P85534), 
SK1_ARCTE   (P85539), SK1_BANRO   (P85544), SK1_BLACR   (P85547), 
SK1_BLADU   (P85550), SK1_BLAGE   (P85555), SK1_BLAOR   (P85560), 
SK1_BLEDI   (P85566), SK1_CRYDW   (P85571), SK1_CRYKY   (P85576), 
SK1_DELRA   (B3EWM3), SK1_DERAT   (P85598), SK1_DERER   (P85586), 
SK1_DERIN   (P85592), SK1_DIPPU   (P85603), SK1_ELLSS   (P85852), 
SK1_ERGCA   (P85613), SK1_EUBDI   (P85619), SK1_EUBPO   (P85625), 
SK1_EUBSB   (P85631), SK1_EURFL   (P85847), SK1_GROGR   (P85640), 
SK1_GROPO   (P85642), SK1_GYNCS   (P85850), SK1_GYNLU   (P85652), 
SK1_LUCGR   (P85665), SK1_LUCSU   (P85671), SK1_LUCVE   (P85677), 
SK1_MASDA   (P85683), SK1_NEORO   (P85686), SK1_PANSB   (P85692), 
SK1_PANSS   (P85698), SK1_PANVI   (P85854), SK1_PERAM   (P36885), 
SK1_PERAU   (P85704), SK1_PERBR   (P85712), SK1_PERFU   (P85716), 
SK1_PERRU   (P85722), SK1_POLAY   (P85743), SK1_PRIVA   (P85749), 
SK1_PSEBJ   (P85753), SK1_PSEFO   (P85761), SK1_PSEFV   (P85757), 
SK1_PYCSU   (P85765), SK1_RHOPR   (P85810), SK1_RHYMA   (P04428), 
SK1_SHELA   (P85856), SK1_SYMPA   (P85786), SK1_THEPT   (P85792)
» more

UniProtKB/Swiss-Prot
False negative sequences
10 sequences

CAE12_LITRO (P86507), CAE12_RANCI (P62540), CAE12_RANSP (P62541), 
CAE21_RANCI (P82087), CAE22_RANCI (P82088), CAE31_RANCI (P82089), 
CAE32_RANCI (P82090), CAE41_RANCI (P82091), CAE42_RANCI (P82092), 
SK2_RHOPR   (P85811)
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

CAER2_XENLA (P05223)

		
UniProtKB/Swiss-Prot
False positive sequences
1 sequence

ATP23_COCIM (Q1E910)

		
PDB
[Detailed view]
10 PDB

5WRJ; 7EZH; 7EZK; 7EZM; 7F8V; 7F8W; 7MBX; 7MBY; 7XOU; 7XOW