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PROSITE entry PS00267


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General information about the entry

Entry name [info] TACHYKININ
Accession [info] PS00267
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-APR-1990 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00240

Name and characterization of the entry

Description [info] Tachykinin family signature.
Pattern [info] 
F-[IVFY]-G-[LM]-M-[G>].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 95 in 88 different sequences
Number of true positive hits 66 in 59 different sequences
Number of 'unknown' hits 0
Number of false positive hits 29 in 29 different sequences
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 69.47 %
Recall (true positives / (true positives + false negatives)) 98.51 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 59 sequences 

TKN1_BOVIN  (P01289), TKN1_CARAU  (P25421), TKN1_HUMAN  (P20366), 

TKN1_MESAU  (Q60541), TKN1_MOUSE  (P41539), TKN1_OCTVU  (Q8I6S3), 
TKN1_PHLMA  (P08613), TKN1_PSEGU  (P42986), TKN1_RABIT  (P41540), 
TKN1_RAT(P06767), TKN1_SCYCA  (P08608), TKN1_THECO  (M9P2C1), 
TKN1_TORMA  (Q7LZ48), TKN1_UPEIN  (P82026), TKN1_UPERU  (P08612), 
TKN2_OCTVU  (Q8I6S2), TKN2_PHLMA  (P08614), TKN2_PSEGU  (P42987), 
TKN2_SCYCA  (P08609), TKN2_UPERU  (P08616), TKN3_PSEGU  (P42988), 
TKN4_HUMAN  (Q86UU9), TKN4_MOUSE  (Q99N14), TKN4_PSEGU  (P42989), 
TKN4_RABIT  (Q6ECK6), TKN4_RAT(Q8CH01), TKN5_PSEGU  (P42990), 
TKNA_CAVPO  (P67932), TKNA_CHICK  (P19850), TKNA_GADMO  (P28498), 
TKNA_HORSE  (P67933), TKNA_LITCT  (P22688), TKNA_ONCMY  (P28499), 
TKNA_PELRI  (P29207), TKNA_SCYCA  (P41333), TKNB_CHICK  (P19851), 
TKNB_GADMO  (P69144), TKNB_LITCT  (P22689), TKNB_ONCMY  (P69143), 
TKNB_PELRI  (P29135), TKNC_LITCT  (P22690), TKNG_ONCMY  (Q9PRZ3), 
TKNK_BOVIN  (P08858), TKNK_HUMAN  (Q9UHF0), TKNK_MOUSE  (P55099), 
TKNK_PELRI  (P67935), TKNK_PIG(P67934), TKNK_RAT(P08435), 
TKNM_ODOMA  (P40951), TKN_ELECI   (P62933), TKN_ELEMO   (P62934), 
TKN_KASSE   (P08611), TKN_PHYBI   (P08610), TKN_PHYFU   (P08615), 
TKSIA_AEDAE (P42634), TLP10_PHONI (P86307), TLP11_PHONI (P86308), 
TLP13_PHONI (P86310), TLP9_PHONI  (P86306)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

TKND_LITCT  (P22691)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			29 sequences
			


			
ADEP_ECOLI  (P31466), AROK_BURL3  (Q39KC5), AROK_BURMA  (Q62GA9), 

			
AROK_BURP1  (Q3JMW0), AROK_BURPS  (Q63Q56), AROK_BURTA  (Q2SU71), 
AROK_CUPPJ  (Q46WJ3), AROK_RALN1  (Q8XV61), AROK_RHILO  (Q98FY0), 
AROK_RHIME  (Q92ME6), COX1_BACSU  (P24010), ERS1_ARATH  (Q38846), 
FUS_BRSVA   (P29791), FUS_BRSVC   (P22167), FUS_BRSVR   (P23728), 
GLXK_BACSU  (P42100), HMA9_ORYSJ  (A0A0P0X004), KR74_ICHVA  (Q00095), 
LAX12_ORYSJ (Q688J2), LAX14_ORYSJ (Q53JG7), LAX1_ARATH  (Q9LFB2), 
LAX1_MEDTR  (Q9FEL8), LAX3_ARATH  (Q9CA25), LAX3_MEDTR  (Q9FEL6), 
NASA_BACSU  (P42432), PDR1_TOBAC  (Q76CU2), Y2524_CUPNH (P31640), 
Y2585_DEIRA (Q9RRA9), YAT1_FUSBL  (P05443)


			
			» more
			


				
	

	

		PDB
[Detailed view]		
		
			14 PDB
			


			1MXQ; 1MYU; 1N6T; 1P9F; 2B19; 2GFR; 2KS9; 2KSA; 2KSB; 2MCE; 2MOC; 2NOU; 
			
				4HOM; 7VDM
			
			

			» more