PROSITE logo

PROSITE entry PS00267


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] TACHYKININ
Accession [info] PS00267
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-APR-1990 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00240

Name and characterization of the entry

Description [info] Tachykinin family signature.
Pattern [info] 
F-[IVFY]-G-[LM]-M-[G>].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 95 in 88 different sequences
Number of true positive hits 66 in 59 different sequences
Number of 'unknown' hits 0
Number of false positive hits 29 in 29 different sequences
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 69.47 %
Recall (true positives / (true positives + false negatives)) 98.51 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 59 sequences 

TKN1_BOVIN  (P01289), TKN1_CARAU  (P25421), TKN1_HUMAN  (P20366), 

TKN1_MESAU  (Q60541), TKN1_MOUSE  (P41539), TKN1_OCTVU  (Q8I6S3), 
TKN1_PHLMA  (P08613), TKN1_PSEGU  (P42986), TKN1_RABIT  (P41540), 
TKN1_RAT(P06767), TKN1_SCYCA  (P08608), TKN1_THECO  (M9P2C1), 
TKN1_TORMA  (Q7LZ48), TKN1_UPEIN  (P82026), TKN1_UPERU  (P08612), 
TKN2_OCTVU  (Q8I6S2), TKN2_PHLMA  (P08614), TKN2_PSEGU  (P42987), 
TKN2_SCYCA  (P08609), TKN2_UPERU  (P08616), TKN3_PSEGU  (P42988), 
TKN4_HUMAN  (Q86UU9), TKN4_MOUSE  (Q99N14), TKN4_PSEGU  (P42989), 
TKN4_RABIT  (Q6ECK6), TKN4_RAT(Q8CH01), TKN5_PSEGU  (P42990), 
TKNA_AQUCT  (P22688), TKNA_CAVPO  (P67932), TKNA_CHICK  (P19850), 
TKNA_GADMO  (P28498), TKNA_HORSE  (P67933), TKNA_ONCMY  (P28499), 
TKNA_PELRI  (P29207), TKNA_SCYCA  (P41333), TKNB_AQUCT  (P22689), 
TKNB_CHICK  (P19851), TKNB_GADMO  (P69144), TKNB_ONCMY  (P69143), 
TKNB_PELRI  (P29135), TKNC_AQUCT  (P22690), TKNG_ONCMY  (Q9PRZ3), 
TKNK_BOVIN  (P08858), TKNK_HUMAN  (Q9UHF0), TKNK_MOUSE  (P55099), 
TKNK_PELRI  (P67935), TKNK_PIG(P67934), TKNK_RAT(P08435), 
TKNM_ODOMA  (P40951), TKN_ELECI   (P62933), TKN_ELEMO   (P62934), 
TKN_KASSE   (P08611), TKN_PHYBI   (P08610), TKN_PHYFU   (P08615), 
TKSIA_AEDAE (P42634), TLP10_PHONI (P86307), TLP11_PHONI (P86308), 
TLP13_PHONI (P86310), TLP9_PHONI  (P86306)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

TKND_AQUCT  (P22691)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			29 sequences
			


			
ADEP_ECOLI  (P31466), AROK_BURL3  (Q39KC5), AROK_BURMA  (Q62GA9), 

			
AROK_BURP1  (Q3JMW0), AROK_BURPS  (Q63Q56), AROK_BURTA  (Q2SU71), 
AROK_CUPPJ  (Q46WJ3), AROK_RALN1  (Q8XV61), AROK_RHILO  (Q98FY0), 
AROK_RHIME  (Q92ME6), COX1_BACSU  (P24010), ERS1_ARATH  (Q38846), 
FUS_BRSVA   (P29791), FUS_BRSVC   (P22167), FUS_BRSVR   (P23728), 
GLXK_BACSU  (P42100), HMA9_ORYSJ  (A0A0P0X004), KR74_ICHVA  (Q00095), 
LAX12_ORYSJ (Q688J2), LAX14_ORYSJ (Q53JG7), LAX1_ARATH  (Q9LFB2), 
LAX1_MEDTR  (Q9FEL8), LAX3_ARATH  (Q9CA25), LAX3_MEDTR  (Q9FEL6), 
NASA_BACSU  (P42432), PDR1_TOBAC  (Q76CU2), Y2524_CUPNH (P31640), 
Y2585_DEIRA (Q9RRA9), YAT1_FUSBL  (P05443)


			
			» more
			


				
	

	

		PDB
[Detailed view]		
		
			17 PDB
			


			1MXQ; 1MYU; 1N6T; 1P9F; 2B19; 2GFR; 2KS9; 2KSA; 2KSB; 2MCE; 2MOC; 2NOU; 
			
				4HOM; 7VDM; 8JBG; 8JBH; 8U26
			
			

			» more