PROSITE entry PS00269
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry
Entry name [info] | DEFENSIN |
Accession [info] | PS00269 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-OCT-1993 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00242 |
Name and characterization of the entry
Description [info] | Mammalian defensins signature. |
Pattern [info] |
C-x-C-x(3,5)-C-x(7)-G-x-C-x(9)-C-C. |
Numerical results [info]
Total number of hits | 60 in 60 different sequences |
Number of true positive hits | 59 in 59 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 1 |
Number of false negative sequences | 12 |
Number of 'partial' sequences | 2 |
Precision (true positives / (true positives + false positives)) | 98.33 % |
Recall (true positives / (true positives + false negatives)) | 83.10 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Site [info] | disulfide at position 1 |
Site [info] | disulfide at position 3 |
Site [info] | disulfide at position 5 |
Site [info] | disulfide at position 9 |
Site [info] | disulfide at position 11 |
Site [info] | disulfide at position 12 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
59 sequences
DEF1A_CAVPO (P11478 ), DEF1B_CAVPO (Q64365 ), DEF1_HUMAN (P59665 ), DEF1_MACMU (P60030 ), DEF1_MESAU (P81465 ), DEF1_PANTR (Q5G863 ), DEF1_PAPHA (P84757 ), DEF1_RABIT (P07469 ), DEF1_RAT (Q62716 ), DEF2_CAVPO (P49112 ), DEF2_MACMU (P82317 ), DEF2_MESAU (P81466 ), DEF2_RABIT (P07468 ), DEF2_RAT (Q62715 ), DEF3A_RAT (Q62713 ), DEF3B_RAT (Q9Z1F1 ), DEF3_HUMAN (P59666 ), DEF3_MACMU (P60031 ), DEF3_MESAU (P81467 ), DEF3_PAPHA (P84758 ), DEF3_RABIT (P01376 ), DEF4_HUMAN (P12838 ), DEF4_MACMU (P82319 ), DEF4_MESAU (P81468 ), DEF4_PANTR (Q5G862 ), DEF4_PAPHA (P86724 ), DEF4_RABIT (P01377 ), DEF4_RAT (Q62714 ), DEF5_HUMAN (Q01523 ), DEF5_PANTR (Q5G861 ), DEF5_RABIT (P07467 ), DEF5_RAT (P82106 ), DEF6_HUMAN (Q01524 ), DEF6_MACMU (P82320 ), DEF6_PANTR (Q5G860 ), DEF6_RABIT (P07466 ), DEF7_RABIT (P80223 ), DEF8_MACMU (P60032 ), DEFA1_MOUSE (P11477 ), DEFA1_ORNAN (P0C8A1 ), DEFA2_MOUSE (P28309 ), DEFA2_ORNAN (P0C8A2 ), DEFA3_MOUSE (P28310 ), DEFA3_ORNAN (P0C8A3 ), DEFA5_MOUSE (P28312 ), DEFA6_MOUSE (P50704 ), DEFA7_MOUSE (P50705 ), DEFA8_MOUSE (P50706 ), DEFA9_MOUSE (P50707 ), DFA10_MOUSE (P50708 ), DFA11_MOUSE (P50709 ), DFA13_MOUSE (P50711 ), DFA14_MOUSE (P50712 ), DFA15_MOUSE (P50713 ), DFA16_MOUSE (P50714 ), DFA17_MOUSE (Q64016 ), DFA23_MOUSE (Q5G866 ), DFA24_MOUSE (Q5G865 ), DFA26_MOUSE (Q3L180 )» more
|
UniProtKB/Swiss-Prot False negative sequences |
12 sequences
BTDA_PAPAN (B6ULW4 ), BTDB_PAPAN (B6ULW5 ), BTDC_PAPAN (B6ULW6 ), BTDD_PAPAN (B6ULW7 ), DEF7_PANTR (Q5G859 ), DEFA1_HORSE (A6YB85 ), DEFA4_MOUSE (P28311 ), DEFA4_ORNAN (P0C8A4 ), RK1_RABIT (P81655 ), RTD1A_MACMU (P82270 ), RTD1B_MACMU (P82271 ), RTD3_MACMU (Q9GLR2 )» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
BTDA_PAPHA (P86722 ), BTDB_PAPHA (P86723 ) |
UniProtKB/Swiss-Prot False positive sequences |
1 sequence
KRUC_SHEEP (P26372 ) |
PDB [Detailed view] |
38 PDB
1DFN; 1ZMM; 1ZMP; 1ZMQ; 2KHT; 2LXZ; 2MIT; 2PM1; 2PM4; 2PM5; 3GNY; 3H6C; 3HJ2; 3HJD; 3I5W; 3LO1; 3LO2; 3LO4; 3LO6; 3LO9; 3LOE; 3LVX; 3QTE; 4E82; 4E83; 4E86; 4LB1; 4LB7; 4LBB; 4LBF; 4RBW; 4RBX; 5CUI; 5CUJ; 5CUM; 6DMM; 6DMQ; 6KRA » more |