PROSITE entry PS00279
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General information about the entry
Entry name [info] | MACPF_1 |
Accession [info] | PS00279 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-APR-1990 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00251 |
Name and characterization of the entry
Description [info] | Membrane attack complex/perforin (MACPF) domain signature. |
Pattern [info] |
Y-x(6)-[FY]-G-T-H-[FY]. |
Numerical results [info]
Total number of hits | 30 in 30 different sequences |
Number of true positive hits | 30 in 30 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 25 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 54.55 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
30 sequences
CO6_BOVIN (Q29RU4), CO6_HUMAN (P13671), CO6_PANTR (P61134), CO6_PONPY (P61135), CO6_RAT (Q811M5), CO7_BOVIN (Q29RQ1), CO7_HUMAN (P10643), CO7_PIG (Q9TUQ3), CO7_PONAB (Q5RAD0), CO8A_HUMAN (P07357), CO8A_MOUSE (Q8K182), CO8A_RABIT (P98136), CO8B_HUMAN (P07358), CO8B_MOUSE (Q8BH35), CO8B_ONCMY (Q90X85), CO8B_PAROL (Q9PVW7), CO8B_RAT(P55314), CO9_BOVIN (Q3MHN2), CO9_HORSE (P48770), CO9_HUMAN (P02748), CO9_MOUSE (P06683), CO9_ONCMY (P06682), CO9_RABIT (P48747), CO9_RAT (Q62930), CO9_TAKRU (P79755), PERF_HUMAN (P14222), PERF_MOUSE (P10820), PERF_RAT(P35763), PV21_POMCA (P0C8G6), PV21_POMMA (P0DQO9)» more
|
UniProtKB/Swiss-Prot False negative sequences |
25 sequences
BRNP1_BOVIN (Q5E9L2), BRNP1_CHICK (Q7ZZR3), BRNP1_HUMAN (O60477), BRNP1_MOUSE (Q920P3), BRNP1_RAT (Q925T8), BRNP2_HUMAN (Q9C0B6), BRNP2_MOUSE (Q6DFY8), BRNP2_PONAB (Q5RDR5), BRNP2_RAT (Q8K1M8), BRNP3_HUMAN (Q76B58), BRNP3_MOUSE (Q499E0), BRNP3_RAT (Q8K1M7), CAD1_ARATH (Q9C7N2), CO8B_RABIT (P98137), MACP1_ARATH (Q8L612), MACP2_ARATH (Q9STW5), MPEG1_BOVIN (Q2KJC3), MPEG1_HUMAN (Q2M385), MPEG1_MOUSE (A1L314), MPEG1_PONAB (Q5RBP9), MPEG1_RAT (Q9WV57), NSL1_ARATH (Q9SGN6), TX60A_ACTVL (Q76DT2), TX60A_PHYSE (P58911), TX60B_PHYSE (P58912)» more |
PDB [Detailed view] |
19 PDB
2QQH; 2RD7; 3NSJ; 3OJY; 3T5O; 4A5W; 4E0S; 5FMW; 6CXO; 6DLW; 6H03; 6H04; 7NYC; 7NYD; 7PAG; 8B0F; 8B0G; 8B0H; 8DE6 » more |