PROSITE entry PS00281
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General information about the entry
| Entry name [info] | BOWMAN_BIRK |
| Accession [info] | PS00281 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-DEC-2001 DATA UPDATE; 13-SEP-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00253 |
Name and characterization of the entry
| Description [info] | Bowman-Birk serine protease inhibitors family signature. |
| Pattern [info] |
C-x(5,6)-[DENQKRHSTA]-C-[PASTDH]-[PASTDK]-[ASTDV]-C-[NDEKS]-[DEKRHSTA]-C. |
Numerical results [info]
| Total number of hits | 39 in 36 different sequences |
| Number of true positive hits | 39 in 36 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 6 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 86.67 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 2 |
| Site [info] | disulfide at position 1 |
| Site [info] | disulfide at position 4 |
| Site [info] | disulfide at position 8 |
| Site [info] | disulfide at position 11 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
36 sequences
IBB1_AMBAC (P83284), IBB1_ARAHY (P01066), IBB1_COILA (P07679), IBB1_DIOGL (P82469), IBB1_LATSA (P86701), IBB1_LUPAL (P85172), IBB1_PHAAN (P01058), IBB1_SOYBN (P01055), IBB1_WHEAT (P09863), IBB2_AMBCE (P83283), IBB2_ARAHY (P01067), IBB2_PEA(Q41066), IBB2_PHAAN (P01061), IBB2_PHAVU (P01060), IBB2_SETIT (P19860), IBB2_WHEAT (P09864), IBB3_MACAX (P01057), IBB3_SETIT (P22737), IBB4_MACAX (P01059), IBB4_PHIVI (P16343), IBBA_PEA(Q41065), IBBC2_SOYBN (P01063), IBBD2_SOYBN (P01064), IBBR_ORYSI (A2WK50), IBBR_ORYSJ (Q0JR25), IBBWP_MAIZE (P31862), IBBWT_MEDSA (P16346), IBB_HORVU (P12940), IBB_LENCU (Q8W4Y8), IBB_MEDSC (P80321), IBB_PHALU (P01056), IBB_VICFA (P24661), IBB_VICSN (P01065), IBB_VIGRR (P01062), IBB_VIGUC (Q9S9E3), IBB_VIGUN (P17734)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
6 sequences
IBB3_PHAVU (P81484), IBB3_WHEAT (P81713), IBB4_PHAVU (P81483), IBBB_PEA(P56679), IBB_ERYVA (P81705), IBB_PHAAT (P83311)» more |
| PDB [Detailed view] |
19 PDB
1BBI; 1C2A; 1D6R; 1H34; 1K9B; 1MVZ; 1PI2; 1TAB; 1TX6; 2AIH; 2BBI; 2FJ8; 2G81; 2ILN; 2QN5; 3MYW; 3RU4; 5J4Q; 5J4S » more |