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Entry: PS00299

General information about the entry

Entry name [info] UBIQUITIN_1
Accession [info] PS00299
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE;
17-JUN-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00271

Name and characterization of the entry

Description [info] Ubiquitin domain signature.
Pattern [info]
K-x(2)-[LIVM]-x-[DESAK]-x(3)-[LIVM]-[PAQ]-x(3)-Q-x-[LIVM]-[LIVMC]-
[LIVMFY]-x-G-x(4)-[DE].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_03 which contains 562'755 sequence entries.


Total number of hits 451 in 198 different sequences
Number of true positive hits 451 in 198 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 215
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 67.72 %

Comments [info]

Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 11
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
198 sequences

BAG6_HUMAN  (P46379    ), BAG6_MOUSE  (Q9Z1R2    ), BAG6_ORNAN  (A7X5R6    ), 
BAG6_PIG    (A5D9M6    ), BAG6_RAT    (Q6MG49    ), DSK2_YEAST  (P48510    ), 
NEDD8_BOVIN (P61282    ), NEDD8_CAEEL (Q93725    ), NEDD8_DICDI (Q54XV3    ), 
NEDD8_DROME (Q9VJ33    ), NEDD8_HUMAN (Q15843    ), NEDD8_MOUSE (P29595    ), 
NEDD8_RABIT (Q4PLJ0    ), NEDD8_RAT   (Q71UE8    ), R27AA_ARATH (P59271    ), 
R27AA_ORYSJ (Q9ARZ9    ), R27AB_ARATH (P59232    ), R27AB_ORYSJ (P51431    ), 
R27AC_ARATH (P59233    ), RL401_CHLRE (P0CH11    ), RL401_SCHPO (P0CH06    ), 
RL402_SCHPO (P0CH07    ), RL402_TRYCR (P0CH27    ), RL403_CHLRE (P0CH10    ), 
RL40A_ARATH (B9DHA6    ), RL40A_ORYSJ (P0CH34    ), RL40A_YEAST (P0CH08    ), 
RL40B_ARATH (Q42202    ), RL40B_ORYSJ (P0CH35    ), RL40B_YEAST (P0CH09    ), 
RL40_ACACA  (P49633    ), RL40_BOVIN  (P63048    ), RL40_BRARP  (P51423    ), 
RL40_CAEEL  (P49632    ), RL40_CANLF  (P63050    ), RL40_CRYNJ  (P40909    ), 
RL40_DICDI  (P14794    ), RL40_DROME  (P18101    ), RL40_EIMBO  (P46575    ), 
RL40_FELCA  (P63052    ), RL40_HUMAN  (P62987    ), RL40_LEIMA  (P69201    ), 
RL40_MACFA  (P0C273    ), RL40_MOUSE  (P62984    ), RL40_NEUCR  (P0C224    ), 
RL40_NICSY  (P49636    ), RL40_OPHHA  (P68205    ), RL40_PIG    (P63053    ), 
RL40_PONPY  (P0C275    ), RL40_RAT    (P62986    ), RL40_SHEEP  (P0C276    ), 
RL40_TETPY  (P33190    ), RL40_TETTS  (P0DJ25    ), RL40_TRYBB  (P21899    ), 
RL40_TRYCR  (P14795    ), RS271_HORVU (P0CG86    ), RS272_HORVU (P0CG87    ), 
RS27A_BOVIN (P62992    ), RS27A_CAEBR (P37164    ), RS27A_CAEEL (P37165    ), 
RS27A_CAVPO (P62978    ), RS27A_CHICK (P79781    ), RS27A_DAUCA (P59272    ), 
RS27A_DICDI (P14797    ), RS27A_DROME (P15357    ), RS27A_HUMAN (P62979    ), 
RS27A_ICTPU (P68200    ), RS27A_KLULA (P69061    ), RS27A_LUPAL (P47905    ), 
RS27A_MAIZE (P27923    ), RS27A_MANSE (P29504    ), RS27A_MOUSE (P62983    ), 
RS27A_NEUCR (P14799    ), RS27A_PLUXY (P68202    ), RS27A_RAT   (P62982    ), 
RS27A_SCHPO (P0C016    ), RS27A_SOLLC (P62980    ), RS27A_SOLTU (P62981    ), 
RS27A_SPOFR (P68203    ), RS27B_SCHPO (P0C8R3    ), RS31_YEAST  (P05759    ), 
RUB1_ARATH  (Q9SHE7    ), RUB1_DESAN  (P0C073    ), RUB1_ORYSJ  (P0C030    ), 
RUB1_YEAST  (Q03919    ), RUB2_ARATH  (Q8RUC6    ), RUB2_ORYSJ  (P0C031    ), 
RUB3_ARATH  (O65381    ), RUB3_ORYSJ  (P0C032    ), UB4AA_ONCMY (C1BGZ8    ), 
UB4AA_SALSA (B5XFI8    ), UB4AB_ONCMY (C1BHN7    ), UB4AB_SALSA (B5X9S9    ), 
UBB_BOVIN   (P0CG53    ), UBB_CAVPO   (P0CG54    ), UBB_CHICK   (P0CG62    ), 
UBB_GORGO   (P0CG67    ), UBB_HORSE   (Q8MKD1    ), UBB_HUMAN   (P0CG47    ), 
UBB_MOUSE   (P0CG49    ), UBB_PANTR   (P0CG65    ), UBB_PONPY   (P0CG60    ), 
UBB_RAT     (P0CG51    ), UBB_SHEEP   (P0CG55    ), UBC_BOVIN   (P0CH28    ), 
UBC_GORGO   (P0CG66    ), UBC_HUMAN   (P0CG48    ), UBC_MOUSE   (P0CG50    ), 
UBC_PANTR   (P0CG64    ), UBC_PIG     (P0CG68    ), UBC_PONPY   (P0CG61    ), 
UBC_RAT     (Q63429    ), UBFD1_HUMAN (O14562    ), UBFD1_MOUSE (Q78JW9    ), 
UBI1P_CANAX (P0CG73    ), UBI1P_NICSY (P0CG85    ), UBI1P_PETCR (P0CH04    ), 
UBI2P_PETCR (P0CH05    ), UBI4P_CANAX (P0CG74    ), UBI4P_KLULA (P0CG75    ), 
UBI4P_NEUCR (P0CG70    ), UBI4P_NICSY (P0CG84    ), UBI4P_SCHPO (P0CG72    ), 
UBI4P_YEAST (P0CG63    ), UBIL_NPVAC  (P16709    ), UBIL_NPVOP  (Q05120    ), 
UBIM_BOVIN  (P62865    ), UBIM_HUMAN  (P35544    ), UBIM_MOUSE  (P35545    ), 
UBIM_MUSSI  (P62868    ), UBIM_PIG    (P55812    ), UBIM_PONAB  (P0C2F1    ), 
UBIM_RAT    (Q05474    ), UBIQ1_CAEEL (P0CG71    ), UBIQA_DICDI (P0CG76    ), 
UBIQD_DICDI (P0CG77    ), UBIQF_DICDI (P0CG78    ), UBIQG_DICDI (P0CG79    ), 
UBIQH_DICDI (P0CG81    ), UBIQI_DICDI (P0CG80    ), UBIQJ_DICDI (P0CG88    ), 
UBIQP_ACEPE (P42739    ), UBIQP_AGLNE (P42740    ), UBIQP_AVEFA (P69309    ), 
UBIQP_CRIGR (P62976    ), UBIQP_DROME (P0CG69    ), UBIQP_EUPEU (P23324    ), 
UBIQP_GEOCY (P59669    ), UBIQP_HORVU (P0CG83    ), UBIQP_LINUS (P69315    ), 
UBIQP_PEA   (P69322    ), UBIQP_PHYIN (P22589    ), UBIQP_SOYBN (P69325    ), 
UBIQP_STRPU (P23398    ), UBIQP_TETPY (P0CG82    ), UBIQP_XENLA (P62972    ), 
UBIQ_AVESA  (P69310    ), UBIQ_CAMDR  (Q865C5    ), UBIQ_CERCA  (P68197    ), 
UBIQ_COPCO  (P19848    ), UBIQ_ENCCU  (Q8SWD4    ), UBIQ_HELAN  (P69313    ), 
UBIQ_LUMTE  (P84589    ), UBIQ_LUPPO  (P69317    ), UBIQ_RABIT  (P62975    ), 
UBIQ_WHEAT  (P69326    ), UBL1_SCHPO  (O14399    ), UBL4A_ANOFI (C3KHF2    ), 
UBL4A_CALJA (B0KWT6    ), UBL4A_DANRE (Q7ZWB2    ), UBL4A_ESOLU (C1BXU5    ), 
UBL4A_HUMAN (P11441    ), UBL4A_MOUSE (P21126    ), UBL4A_PLEMO (B1MTV8    ), 
UBL4A_PONAB (Q5R4T1    ), UBL4A_RABIT (B7NZQ9    ), UBL4A_RAT   (B2GV38    ), 
UBL4A_RHIFE (B2KIK3    ), UBL4A_XENLA (Q0D261    ), UBL4A_XENTR (A4QND0    ), 
UBL4B_BOVIN (Q2T9Q2    ), UBL4B_MONDO (Q19KS6    ), UBP14_BOVIN (Q0IIF7    ), 
UBP14_HUMAN (P54578    ), UBP14_MOUSE (Q9JMA1    ), UBP14_PANTR (P60051    ), 
UBP14_RABIT (P40826    ), UBP6_ARATH  (Q949Y0    ), UBP6_SCHPO  (Q92353    ), 
UBP7_ARATH  (Q84WC6    ), UBQ10_ARATH (Q8H159    ), UBQ11_ARATH (P0CH33    ), 
UBQ12_ARATH (Q3E7K8    ), UBQ14_ARATH (Q3E7T8    ), UBQ3_ARATH  (Q1EC66    ), 
UBQ3_ORYSJ  (Q58G87    ), UBQ4_ARATH  (P0CH32    ), UBQ9_ARATH  (Q9FHQ6    )
» more

UniProtKB/Swiss-Prot
False negative sequences
215 sequences

ANR60_HUMAN (Q9BZ19    ), BAG1_ARATH  (Q0WUQ1    ), BAG1_HUMAN  (Q99933    ), 
BAG1_MOUSE  (Q60739    ), BAG1_RAT    (B0K019    ), BAG2_ARATH  (Q0WPX7    ), 
BAG3_ARATH  (Q9LYP4    ), BAG4_ARATH  (Q8RX71    ), BAG6A_XENLA (Q9YHD3    ), 
BAG6B_XENLA (Q6PA26    ), BAG6_DANRE  (A3KPW9    ), BAG6_XENTR  (A4IH17    ), 
CIP73_LOTJA (D5LXJ0    ), DDI1_ARATH  (Q1EBV4    ), DDI1_COCIM  (Q1DNB9    ), 
DDI1_DEBHA  (Q6BK42    ), DSK2A_ARATH (Q9SII9    ), DSK2B_ARATH (Q9SII8    ), 
ELOB_HUMAN  (Q15370    ), HUB1_ASHGO  (Q756X3    ), HUB1_CANGA  (Q6FIX7    ), 
HUB1_DEBHA  (Q6BUP7    ), HUB1_KLULA  (Q6CU12    ), HUB1_SCHPO  (O94650    ), 
HUB1_YEAST  (Q6Q546    ), IQUB_HUMAN  (Q8NA54    ), IQUB_MACFA  (Q4R6T7    ), 
IQUB_MOUSE  (Q8CDK3    ), IQUB_RAT    (Q45GW3    ), MDY2_YEAST  (Q12285    ), 
MIDNA_XENLA (Q7ZWN4    ), MIDNB_XENLA (Q7ZWX9    ), MIDN_DANRE  (Q6NYU6    ), 
MIDN_HUMAN  (Q504T8    ), MIDN_MOUSE  (Q3TPJ7    ), MIDN_RAT    (D4AE48    ), 
MIDN_XENTR  (Q5EB28    ), MUB1_ARATH  (Q9MAB9    ), MUB1_ORYSJ  (Q75GT2    ), 
MUB2_ARATH  (Q8LCS8    ), MUB2_ORYSJ  (Q67UI2    ), MUB3_ARATH  (Q9SW27    ), 
MUB3_ORYSJ  (Q6Z8K4    ), MUB4_ARATH  (Q9LSD8    ), MUB4_ORYSJ  (Q7XRU4    ), 
MUB5_ARATH  (Q9SH14    ), MUB6_ARATH  (Q8GWJ6    ), NED82_DICDI (Q54L35    ), 
NF2IP_HUMAN (Q8NCF5    ), NF2IP_MACFA (Q9GLZ9    ), NF2IP_MOUSE (O09130    ), 
NF2IP_RAT   (Q6AYG7    ), NF2IP_XENTR (Q0P4K8    ), OASL1_MOUSE (Q8VI94    ), 
OASL1_RAT   (G3V645    ), OASL2_MOUSE (Q9Z2F2    ), OASL2_RAT   (Q5MYT9    ), 
OASL_HUMAN  (Q15646    ), OTU1_CHICK  (Q5F3A6    ), OTU1_DANRE  (Q567B1    ), 
OTU1_DROME  (Q9VRJ9    ), OTU1_DROPS  (Q29FC9    ), OTU1_XENLA  (Q0IH43    ), 
P4KG2_ARATH (Q9SGW8    ), P4KG3_ARATH (Q9FNF8    ), P4KG4_ARATH (Q9ZPY9    ), 
P4KG4_ORYSJ (Q6K881    ), P4KG5_ARATH (Q9C671    ), P4KG6_ARATH (Q8W4R8    ), 
P4KG7_ARATH (Q9SI52    ), PIRL8_ORYSJ (Q7XDQ7    ), PRKN_HUMAN  (O60260    ), 
PRKN_MOUSE  (Q9WVS6    ), PRKN_RAT    (Q9JK66    ), R7SL1_ARATH (Q9ZT95    ), 
R7SL2_ARATH (Q9ZQZ6    ), RAD23_DICDI (Q54LV1    ), RAD23_ORYSJ (Q40742    ), 
RAD23_YEAST (P32628    ), RD23A_ARATH (Q84L32    ), RD23A_BOVIN (A3KMV2    ), 
RD23A_HUMAN (P54725    ), RD23A_MOUSE (P54726    ), RD23B_ARATH (Q84L33    ), 
RD23B_BOVIN (Q29RK4    ), RD23B_HUMAN (P54727    ), RD23B_MOUSE (P54728    ), 
RD23B_RAT   (Q4KMA2    ), RD23C_ARATH (Q84L31    ), RD23D_ARATH (Q84L30    ), 
RL40_CHICK  (P62985    ), RL40_LEITA  (P69200    ), RS27A_ASPOF (P31753    ), 
SACS_HUMAN  (Q9NZJ4    ), SACS_MOUSE  (Q9JLC8    ), SF3A1_ARATH (Q8RXF1    ), 
SUMO1_ARATH (P55852    ), SUMO1_ORYSJ (P55857    ), SUMO2_ARATH (Q9FLP6    ), 
SUMO3_ARATH (Q9FLP5    ), SUMO4_ARATH (Q9FKC5    ), SUMO5_ARATH (Q8VZI7    ), 
SUMO5_HUMAN (G2XKQ0    ), SUMO6_ARATH (Q9FKC6    ), SUMO7_ARATH (Q3E8A8    ), 
SUMO8_ARATH (B3H5R8    ), SYSM_ARATH  (Q8RWT8    ), TAF1B_ARATH (Q6PUA2    ), 
TAF1_ARATH  (Q8LRK9    ), TAF1_ORYSJ  (Q67W65    ), TBCEL_HUMAN (Q5QJ74    ), 
TBCEL_MOUSE (Q8C5W3    ), TBCEL_RAT   (Q5PQJ7    ), TBK1_HUMAN  (Q9UHD2    ), 
TBK1_MOUSE  (Q9WUN2    ), TBK1_XENLA  (Q6DFJ6    ), TBP1_ORYSJ  (Q9LL45    ), 
TECR_CAEEL  (Q9N5Y2    ), TMUB1_DANRE (Q6P135    ), TMUB1_RAT   (Q53AQ4    ), 
TMUB1_XENLA (Q3KPV4    ), TMUB1_XENTR (Q4V9Y1    ), TMUB2_BOVIN (Q2HJA8    ), 
TMUB2_HUMAN (Q71RG4    ), TMUB2_MOUSE (Q3V209    ), TMUB2_RAT   (Q4FZV7    ), 
TRP1_ARATH  (Q8L7L8    ), TRP2_ARATH  (Q9SNB9    ), TRP3_ARATH  (Q9C7B1    ), 
TRP4_ARATH  (Q9FFY9    ), TRP5_ARATH  (Q6R0E3    ), TRP6_ARATH  (Q9M347    ), 
U1125_ARATH (Q84WS8    ), UBCP1_BOVIN (Q2KJD7    ), UBCP1_CHICK (Q5ZJJ8    ), 
UBCP1_DANRE (Q6DI37    ), UBCP1_HUMAN (Q8WVY7    ), UBCP1_MOUSE (Q8BGR9    ), 
UBCP1_PONAB (Q5R4C4    ), UBCP1_RAT   (Q5FWT7    ), UBCP1_XENLA (Q641F1    ), 
UBCP1_XENTR (Q28EX9    ), UBCP_ARATH  (Q8W3M6    ), UBIML_HUMAN (A6NDN8    ), 
UBIM_CRIGR  (Q60435    ), UBL3_BOVIN  (Q2TA46    ), UBL3_HUMAN  (O95164    ), 
UBL3_MOUSE  (Q9Z2M6    ), UBL3_RAT    (Q5BJT2    ), UBL4B_HUMAN (Q8N7F7    ), 
UBL4B_MOUSE (Q9CQ84    ), UBL5_ARATH  (Q9FGZ9    ), UBL5_BOVIN  (Q3T0Z3    ), 
UBL5_CAEEL  (P91302    ), UBL5_DANRE  (Q7SXF2    ), UBL5_DICDI  (Q54Q03    ), 
UBL5_DROME  (Q9V998    ), UBL5_HUMAN  (Q9BZL1    ), UBL5_MESAU  (Q6EGX7    ), 
UBL5_MOUSE  (Q9EPV8    ), UBL5_PSAOB  (Q791B0    ), UBP26_ARATH (Q9SCJ9    ), 
UBP26_ORYSI (A2XDG4    ), UBP26_ORYSJ (A3AF13    ), UBP48_CHICK (Q5ZM45    ), 
UBP48_HUMAN (Q86UV5    ), UBP48_MOUSE (Q3V0C5    ), UBP48_RAT   (Q76LT8    ), 
UBP4_BOVIN  (A6QR55    ), UBP4_HUMAN  (Q13107    ), UBP4_MOUSE  (P35123    ), 
UBP4_PONAB  (Q5RCD3    ), UBP4_RAT    (B2GUZ1    ), UBP6_YEAST  (P43593    ), 
UBQ8_ARATH  (Q39256    ), UBQL1_HUMAN (Q9UMX0    ), UBQL1_MOUSE (Q8R317    ), 
UBQL1_PONAB (Q5R684    ), UBQL1_RAT   (Q9JJP9    ), UBQL2_HUMAN (Q9UHD9    ), 
UBQL2_MOUSE (Q9QZM0    ), UBQL3_HUMAN (Q9H347    ), UBQL3_MOUSE (Q8C5U9    ), 
UBQL4_HUMAN (Q9NRR5    ), UBQL4_MOUSE (Q99NB8    ), UBQL_CAEEL  (G5EFF7    ), 
UBQL_DICDI  (Q9NIF3    ), UBTD1_BOVIN (Q3ZBQ1    ), UBTD1_DANRE (Q4V8W7    ), 
UBTD1_HUMAN (Q9HAC8    ), UBTD1_MOUSE (Q91WB7    ), UBTD1_RAT   (Q68FV8    ), 
UBTD1_XENLA (Q640W6    ), UBTD1_XENTR (Q6GL38    ), UBTD2_BOVIN (Q5EAE3    ), 
UBTD2_DANRE (Q6DG43    ), UBTD2_HUMAN (Q8WUN7    ), UBTD2_MOUSE (Q6PGH0    ), 
UHRF1_BOVIN (A7E320    ), UHRF1_DANRE (E7EZF3    ), UHRF1_HUMAN (Q96T88    ), 
UHRF1_MOUSE (Q8VDF2    ), UHRF1_RAT   (Q7TPK1    ), UHRF1_XENLA (B6CHA3    ), 
UHRF1_XENTR (F6UA42    ), UHRF2_HUMAN (Q96PU4    ), UHRF2_MOUSE (Q7TMI3    ), 
UPL5_ARATH  (Q9SU29    ), USA1_YEAST  (Q03714    ), Y2010_ARATH (P0C895    ), 
YB92_SCHPO  (O42967    ), YHLC_SCHPO  (Q9HGL0    ), YQ77_SCHPO  (O94580    ), 
ZFAN4_HUMAN (Q86XD8    ), ZFAN4_MOUSE (D3Z3C6    )
» more


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