PROSITE entry PS00307
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General information about the entry
Entry name [info] | LECTIN_LEGUME_BETA |
Accession [info] | PS00307 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-JUL-1998 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00278 |
Name and characterization of the entry
Description [info] | Legume lectins beta-chain signature. |
Pattern [info] |
[LIV]-[STAG]-V-[DEQV]-[FLI]-D-[ST]. |
Numerical results [info]
Total number of hits | 295 in 295 different sequences |
Number of true positive hits | 107 in 107 different sequences |
Number of 'unknown' hits | 1 |
Number of false positive hits | 187 in 187 different sequences |
Number of false negative sequences | 38 |
Number of 'partial' sequences | 9 |
Precision (true positives / (true positives + false positives)) | 36.39 % |
Recall (true positives / (true positives + false negatives)) | 73.79 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Site [info] | manganese at position 4 |
Site [info] | manganese_calcium at position 6 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
107 sequences
ARC1_PHAVU (P19329), ARC2_PHAVU (P19330), ARC4_PHAVU (Q43629), BGA16_ARATH (Q8GX69), CONA_CANBR (P55915), CONA_CANCT (P81461), CONA_CANEN (P02866), CONA_CANGL (P14894), CONA_CANLI (P81460), CONA_CANRO (P81364), CONV_CANCT (C0HJY1), FRIL_LABPU (Q9ZTA9), LCB1_ROBPS (Q41159), LCB2_ROBPS (Q42372), LCB3_ROBPS (Q41160), LCS1_ROBPS (Q41162), LCS2_ROBPS (Q41161), LEA1_PHAVU (P02873), LEA2_PHAVU (Q41114), LEC1_CLAKE (Q39528), LEC1_CRAMO (P83721), LEC1_CYTSE (P22970), LEC1_LABAL (P23558), LEC1_MEDTR (Q01806), LEC1_PSOTE (O24313), LEC1_ULEEU (P22972), LEC1_VIGUC (P05045), LEC2_CLAKE (Q39529), LEC2_CYTSC (P29257), LEC2_CYTSE (P22971), LEC2_MEDTR (Q01807), LEC2_ULEEU (P22973), LEC4_GRISI (P24146), LEC5_MEDTR (A0A396HQY2), LEC5_VIGUC (P19588), LEC7_MEDTR (G7LII0), LEC8_MEDTR (Q2PP75), LECA2_LABPU (B3EWQ9), LECA_BIOPE (J9PBR3), LECA_CANBL (A0A023GPI8), LECA_CANBN (P58906), LECA_CANGR (A0A067XG71), LECA_CRAAG (P81517), LECA_CYMRO (P86184), LECA_DIOGR (P08902), LECA_DIOGU (P81637), LECA_DIOLA (C0HK27), LECA_DIOVI (P58907), LECA_DIOVO (P58909), LECA_LABPU (P38662), LECA_MACBI (P58908), LECA_MACCS (C0HK81), LECA_MACSE (B3EWJ2), LECA_MACWI (P86624), LECA_SPAPA (P86352), LECB_LATOC (P04122), LECB_SPAPA (P86353), LECB_STYJP (P93538), LECC1_ARAHY (Q70DJ5), LECC1_CENMI (C0HK20), LECC1_CENTO (C0HJX1), LECG_ARAHY (P02872), LECR_CLAKE (Q39527), LECS_STYJP (P93535), LECS_VATGU (P86893), LECS_VATMA (P81371), LECT_BAUFO (P86993), LEC_BAUPU (P16030), LEC_ERYCG (P83410), LEC_ERYCO (P16404), LEC_LATSP (P16349), LEC_LENCC (Q93WH6), LEC_LENCO (Q93X49), LEC_LENCT (Q8VXF2), LEC_LENCU (P02870), LEC_LEUMI (P42088), LEC_LOTTE (P19664), LEC_ONOVI (P02874), LEC_PEA (P02867), LEC_PHALU (P16300), LEC_SOYBN (P05046), LEC_VACFA (P84849), LEC_VICFA (P02871), LEC_VICVI (P56625), LK110_ARATH (Q3E884), LRK12_ARATH (Q7FK82), LRK16_ARATH (Q9M1G3), LRK17_ARATH (Q9LSS0), LRK19_ARATH (Q9LSR8), LRK22_ARATH (Q9FIF0), LRK32_ARATH (Q9ZW11), LRK43_ARATH (O81292), LRK51_ARATH (O04534), LRK59_ARATH (Q9SZD5), LRK81_ARATH (Q9LFH9), LRK82_ARATH (Q9LYX1), LRKS1_ARATH (Q9M9E0), LRKS5_ARATH (Q9FG33), LRKS6_ARATH (Q9FHX3), LRSK7_ORYSJ (A0A0P0VIP0), MALB_MAAAM (P93248), MALS_MAAAM (P0DKL3), PHAE_PHAVU (P05088), PHAL_PHAVU (P05087), PHAM_PHAVU (P15231), SIT1_ORYSJ (Q6H7D2), YOUB_SCHPO (O74793)» more
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UniProtKB/Swiss-Prot False negative sequences |
38 sequences
AR5A_PHAVU (Q42460), AR5B_PHAVU (Q41116), LEC10_MEDTR (A9YWS7), LEC11_MEDTR (A0A396GS61), LEC2_CYMRO (P86795), LEC6_MEDTR (A9YWS4), LEC9_MEDTR (Q2PP74), LECN_PEA(P16270), LECR_PEA(Q40987), LK111_ARATH (Q9FJI4), LRK11_ARATH (Q9M3E5), LRK13_ARATH (Q9M3D8), LRK14_ARATH (Q9M3D7), LRK15_ARATH (Q9M1G4), LRK18_ARATH (Q9LSR9), LRK21_ARATH (Q9FIF1), LRK31_ARATH (Q9ZW09), LRK41_ARATH (O80939), LRK42_ARATH (Q9M345), LRK44_ARATH (O81291), LRK52_ARATH (O04533), LRK53_ARATH (O22834), LRK54_ARATH (O22833), LRK55_ARATH (Q96285), LRK56_ARATH (Q9LEA3), LRK57_ARATH (Q9ZR79), LRK58_ARATH (Q9M1Z9), LRK61_ARATH (Q9SR87), LRK62_ARATH (Q9M021), LRK63_ARATH (Q9M020), LRK64_ARATH (Q66GN2), LRK71_ARATH (Q9S9U1), LRK72_ARATH (O49445), LRK91_ARATH (Q9LXA5), LRK92_ARATH (Q9LSL5), LRKS4_ARATH (Q9M2S4), LRKS7_ARATH (Q9FHG4), SIT2_ORYSJ (Q7XUN6)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
9 sequences
LEAH_PHAVU (P81870), LEC3_ULEEU (P23032), LEC_CROJU (P16352), LEC_CROPI (P16351), LEC_DELRE (P83511), LEC_MACAX (P02875), LG29_VIGUS (P83955), LG31_VIGUS (P83956), PVAP_PHAVU (P84869)» more |
UniProtKB/Swiss-Prot 'Unknown' sequences |
1 sequence
RNJ_SINM2 (M4MR97) |
UniProtKB/Swiss-Prot False positive sequences |
187 sequences
3DHQ_PODAN (Q86ZM3), A92_SSV1(P0C6K8), ACKA_TREDE (Q73P66), ALG1_ARTBC (D4AZD1), AROB_BORBR (Q7WR84), AROB_BORPA (Q7W2B6), AROB_BORPE (Q7VT93), BBLA_TOBAC (F1T160), BBLB_TOBAC (A7WPL6), BBLC1_TOBAC (F1T161), BBLC2_TOBAC (A0A1S3ZQ17), BBLD2_TOBAC (A0A1S4CPU8), BGALA_NEOFI (A1D1Z9), BGL21_ORYSJ (Q60DY1), BI1_ORYSJ (Q9MBD8), BIN3D_ARATH (Q6NPC9), CAOG1_ARATH (Q8H1H9), CARP3_CANAL (P0CY29), CARP3_CANAW (C4YNQ5), CARP3_CANAX (P0CY28), CDHR1_DANRE (Q6B3P0), CLPC_CHLMU (Q9PKA8), CLPC_CHLTR (O84288), CNOT1_DANRE (A1A5H6), CNOT1_HUMAN (A5YKK6), CNOT1_MOUSE (Q6ZQ08), CNOT1_XENTR (A0JP85), COAX_DEIRA (Q9RX54), COBG_SINSX (P21637), COXX_HALS3 (B0R3W4), COXX_HALSA (Q9HRJ8), DIM1A_ARATH (O22268), DPO1_RICCN (Q92GB7), DPO1_RICFE (Q9RAA9), DPO1_RICHE (Q9RLB6), ECDA_ASPRU (K0E4D7), EGLN_MOUSE (Q63961), ENV_FRSFL (P03394), EPIP1_EPING (P83340), ERA_STRGC (O24756), ERA_STRMU (P37214), EXU2_DROPS (Q24617), EXU_DROME (P28750), EXU_DROVI (Q24747), FCGRN_MOUSE (Q61559), FCGRN_RAT (P13599), FMN2_HUMAN (Q9NZ56), GARS_BOMMO (Q04451), GARS_CAEEL (Q10039), GARS_DROME (Q9VUK8), GATC_POPTR (B9INH0), GDL13_ARATH (Q38894), GEFV_DICDI (Q55FD8), GLR3_CAEEL (Q21415), HEXB_FELCA (P49614), HIS7_LEGPA (Q5X5X1), HIS7_LEGPH (Q5ZW89), HIS7_LEGPL (Q5WX93), I5P2_HUMAN (P32019), IFFO1_HUMAN (Q0D2I5), IFFO1_MOUSE (Q8BXL9), IFFO2_HUMAN (Q5TF58), IFFO2_MOUSE (Q8R2V2), IMND1_VIBCR (C9NUM5), IR25A_DROME (E9NA96), ITPR3_BOVIN (Q8WN95), ITPR3_HUMAN (Q14573), ITPR3_MOUSE (P70227), ITPR3_RAT (Q63269), K1C40_BOVIN (A7YWM2), K1C40_HUMAN (Q6A162), K1C40_MOUSE (Q6IFX3), KDAD_SACS2 (Q97UA0), KEX2_YEAST (P13134), KI16B_HUMAN (Q96L93), KI16B_MOUSE (B1AVY7), KL98A_DROME (Q9VB25), LEU3_XYLFA (Q9PAX3), LEU3_XYLFT (Q87BQ1), LIPLL_LISMO (Q8Y489), LIPL_GEOKA (Q5KUD7), LIPL_HALH5 (Q9K6A7), LRP2_HUMAN (P98164), LRP2_PIG(C0HL13), MAC1_USTMA (A0A0D1E3S6), MAK5_VANPO (A7TEG8), MIAA_SALAI (A8M7W9), MIAA_SALTO (A4X4W1), MRAZ_MYCGA (Q7NB78), MTP_MESAU (P55158), NADK_NITEU (Q82UK6), NCPR_SALTR (P19618), NHAK_BACP2 (A8FHE3), NPY2R_BOVIN (P79113), NPY2R_CAVPO (Q9Z2D5), NPY2R_HUMAN (P49146), NPY2R_MACMU (Q9GK74), NPY2R_MOUSE (P97295), NPY2R_PANTR (Q5IS62), NPY2R_PIG (O02836), NUSB_COREF (Q8FT35), NUSB_CORGL (Q8NQ33), PANB_VEREI (A1WDW4), PATE_ASPCL (A1CFL2), POL1_TRSV (Q88893), PRMA_CLOAB (P45558), PUR4_CAEEL (Q19311), PUS10_AERPE (Q9YEN2), RDRP_SHMV (P89202), RECA_LACAC (Q5FL82), RECA_LACHE (Q02348), RECA_LACJO (P62216), RECA_RHOBA (Q7UJJ0), RECA_RUMA7 (P49985), RECA_STRCT (P41055), RIMM_CELJU (B3PDH6), RSMA_GEOMG (Q39W34), RTC5_PARBD (C1G788), RUVB_ANADF (A7H910), SAS6_CAEBR (Q60P76), SECY_CHLMU (Q9PJN1), SECY_CHLPN (Q9Z7S5), SGO1_HUMAN (Q5FBB7), SIN1_HUMAN (Q9BPZ7), SIN1_PONAB (Q5RDV5), SMC_BORPD (A9II65), SRP_DROME (P52172), STCE_EMENI (Q00674), STE20_YARLI (Q6C3D7), STYB_PSEFL (O06835), SWT1_HUMAN (Q5T5J6), SYA_SCHPO (O13914), SYG_BDEBA (Q6MNT9), SYG_BIFLO (Q8G7W9), SYG_CLOAB (Q97EB8), SYG_CLOPE (Q8XHL9), SYG_COREF (Q8FNG6), SYG_CORGL (Q8NNC6), SYG_CUTAK (Q6A964), SYG_DEIRA (Q9RSR5), SYG_LEIXX (Q6AHF7), SYG_MALP2 (Q8EW64), SYG_MESFL (Q6F1J8), SYG_MYCBO (P67033), SYG_MYCPA (Q73Y21), SYG_MYCTO (P9WFV6), SYG_MYCTU (P9WFV7), SYG_NOCFA (Q5YZT7), SYG_STRAW (Q82BR9), SYG_STRCO (Q9L2H9), SYH_MYCPA (P60917), SYI_CLOPE (Q8XHE4), SYM_META3 (A6UUN1), SYR_CLOAB (Q97K78), SYR_CLOPE (Q8XJU2), SYR_LATSS (Q38VQ9), SYV_COREF (Q8FN65), SYV_CORGL (Q8NN37), SYV_CORJK (Q4JWU8), SYV_NOCFA (Q5Z048), T2BB_BACIU (P33562), TAF5_CAEEL (G5EF68), TBCD1_HUMAN (Q86TI0), TDCD_ECO57 (Q8XAF1), TDCD_ECOL6 (P59244), THTPA_RAT (Q8CGV7), TOF1_PICST (A3LR41), TPC1_HUMAN (Q9ULQ1), TPC1_MOUSE (Q9EQJ0), TPC1_RAT(Q9WTN5), TRH_DROME (Q24119), TRPC_HALSA (Q9HSC1), UL148_HCMVM (F5H8Q3), UREG_SPOPA (Q9RP19), VAM6_SCHPO (O13955), VPP4_CAEEL (B2MZD0), Y076_OSHVF (Q6R7F3), Y256_BUCBP (Q89AL2), Y765_SPHAL (Q1GV37), Y942_METJA (Q58352), YDGH_BACSU (P96706), YHJV_ECOLI (P37660), YIDF_SCHPO (Q9UTC4), YL581_MIMIV (Q5UR55), YR406_MIMIV (Q5UQK2), ZBT26_HUMAN (Q9HCK0), ZN287_MOUSE (Q9EQB9)» more |
PDB [Detailed view] |
277 PDB
1APN; 1AVB; 1AX0; 1AX1; 1AX2; 1AXY; 1AXZ; 1AZD; 1BJQ; 1BQP; 1BXH; 1BZW; 1C57; 1CES; 1CIW; 1CJP; 1CN1; 1CON; 1CQ9; 1CR7; 1CVN; 1DBN; 1DHK; 1DQ0; 1DQ1; 1DQ2; 1DQ4; 1DQ5; 1DQ6; 1ENQ; 1ENR; 1ENS; 1FAT; 1FNY; 1FNZ; 1FX5; 1FYU; 1G7Y; 1G8W; 1G9F; 1GIC; 1GKB; 1GSL; 1GZ9; 1GZC; 1H9P; 1H9W; 1HKD; 1HQW; 1I3H; 1JBC; 1JN2; 1JOJ; 1JUI; 1JW6; 1JXN; 1JYC; 1JYI; 1LEC; 1LED; 1LEM; 1LEN; 1LES; 1LGB; 1LGC; 1LOA; 1LOB; 1LOC; 1LOD; 1LOE; 1LOF; 1LOG; 1LTE; 1LU1; 1LU2; 1LUL; 1MVQ; 1N47; 1NLS; 1NXD; 1OFS; 1ONA; 1QDC; 1QDO; 1QF3; 1QGL; 1QMO; 1QNW; 1QNY; 1RIN; 1RIR; 1RIT; 1SBD; 1SBE; 1SBF; 1SCR; 1SCS; 1SFY; 1TEI; 1V6I; 1V6J; 1V6K; 1V6L; 1V6M; 1V6N; 1V6O; 1VAL; 1VAM; 1VIW; 1VLN; 1WBF; 1WBL; 1WUV; 1XQN; 2A7A; 2B7Y; 2BQP; 2CNA; 2CTV; 2CWM; 2CY6; 2CYF; 2D3P; 2D3R; 2D3S; 2D7F; 2DH1; 2DTW; 2DTY; 2DU0; 2DU1; 2DV9; 2DVA; 2DVB; 2DVD; 2DVF; 2DVG; 2E51; 2E53; 2E7Q; 2E7T; 2EF6; 2EIG; 2ENR; 2FMD; 2G4I; 2GDF; 2JDZ; 2JE7; 2JE9; 2JEC; 2LAL; 2LTN; 2OVU; 2OW4; 2P2K; 2P34; 2P37; 2PEL; 2SBA; 2TEP; 2UU8; 2YZ4; 2ZBJ; 2ZMK; 2ZML; 2ZMN; 3CNA; 3D4K; 3ENR; 3IPV; 3JU9; 3N35; 3N36; 3N3H; 3NWK; 3QLQ; 3RRD; 3RS6; 3SH3; 3SNM; 3U4X; 3UJO; 3UJQ; 3UK9; 3UL2; 3WCR; 3WCS; 3WOG; 4CZS; 4D69; 4DPN; 4H55; 4I30; 4K1Y; 4K1Z; 4K20; 4K21; 4L8Q; 4M3C; 4MYE; 4NOT; 4P14; 4P9W; 4P9X; 4P9Y; 4PCR; 4PF5; 4TYS; 4TZD; 4U2A; 4U36; 4WV8; 4XTM; 4XTP; 4XXA; 4Z8B; 5AVA; 5BYN; 5CNA; 5EYX; 5EYY; 5F5Q; 5O6N; 5T50; 5T52; 5T54; 5T55; 5T5J; 5T5L; 5T5O; 5T5P; 5T7P; 5TG3; 5U3E; 5UUY; 5WEY; 5YGM; 5Z5L; 5Z5N; 5Z5P; 5Z5Y; 5ZAC; 6AHG; 6CJ9; 6GW9; 6H2M; 6V95; 6VAV; 6VAW; 6VB8; 6VC3; 6VC4; 6VGF; 6XT6; 7MG1; 7MG2; 7MG3; 7MG4; 7MG5; 7MG6; 7MG7; 7MG8; 7MG9; 7MGA; 7MGB; 7MGC; 7MGD; 8I7Q; 8UX7; 8WMG; 8WMK; 9B33; 9B34; 9B36; 9B37; 9C4I » more |