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Entry: PS00307 |
Entry name [info] | LECTIN_LEGUME_BETA |
Accession [info] | PS00307 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-JUL-1998 DATA UPDATE; 22-FEB-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00278 |
Description [info] | Legume lectins beta-chain signature. |
Pattern [info] |
[LIV]-[STAG]-V-[DEQV]-[FLI]-D-[ST]. |
Total number of hits | 274 in 274 different sequences |
Number of true positive hits | 105 in 105 different sequences |
Number of 'unknown' hits | 1 |
Number of false positive hits | 168 in 168 different sequences |
Number of false negative sequences | 38 |
Number of 'partial' sequences | 9 |
Precision (true positives / (true positives + false positives)) | 38.46 % |
Recall (true positives / (true positives + false negatives)) | 73.43 % |
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Site [info] | manganese at position 4 |
Site [info] | manganese_calcium at position 6 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
105 sequences
ARC1_PHAVU (P19329 ), ARC2_PHAVU (P19330 ), ARC4_PHAVU (Q43629 ), BGA16_ARATH (Q8GX69 ), CONA_CANBR (P55915 ), CONA_CANCT (P81461 ), CONA_CANEN (P02866 ), CONA_CANGL (P14894 ), CONA_CANLI (P81460 ), CONA_CANRO (P81364 ), CONV_CANCT (C0HJY1 ), FRIL_LABPU (Q9ZTA9 ), LCB1_ROBPS (Q41159 ), LCB2_ROBPS (Q42372 ), LCB3_ROBPS (Q41160 ), LCS1_ROBPS (Q41162 ), LCS2_ROBPS (Q41161 ), LEA1_PHAVU (P02873 ), LEA2_PHAVU (Q41114 ), LEC1_CLAKE (Q39528 ), LEC1_CRAMO (P83721 ), LEC1_CYTSE (P22970 ), LEC1_LABAL (P23558 ), LEC1_MEDTR (Q01806 ), LEC1_PSOTE (O24313 ), LEC1_ULEEU (P22972 ), LEC1_VIGUC (P05045 ), LEC2_CLAKE (Q39529 ), LEC2_CYTSC (P29257 ), LEC2_CYTSE (P22971 ), LEC2_MEDTR (Q01807 ), LEC2_ULEEU (P22973 ), LEC4_GRISI (P24146 ), LEC5_MEDTR (A0A396HQY2), LEC5_VIGUC (P19588 ), LEC7_MEDTR (G7LII0 ), LEC8_MEDTR (Q2PP75 ), LECA2_LABPU (B3EWQ9 ), LECA_BIOPE (J9PBR3 ), LECA_CANBL (A0A023GPI8), LECA_CANBN (P58906 ), LECA_CANGR (A0A067XG71), LECA_CRAAG (P81517 ), LECA_CYMRO (P86184 ), LECA_DIOGR (P08902 ), LECA_DIOGU (P81637 ), LECA_DIOLA (C0HK27 ), LECA_DIOSC (B3EWJ2 ), LECA_DIOVI (P58907 ), LECA_DIOVO (P58909 ), LECA_LABPU (P38662 ), LECA_MACBI (P58908 ), LECA_MACCS (C0HK81 ), LECA_MACWI (P86624 ), LECA_SPAPA (P86352 ), LECB_LATOC (P04122 ), LECB_SPAPA (P86353 ), LECB_STYJP (P93538 ), LECC1_ARAHY (Q70DJ5 ), LECC1_CENMI (C0HK20 ), LECC1_CENTO (C0HJX1 ), LECG_ARAHY (P02872 ), LECR_CLAKE (Q39527 ), LECS_STYJP (P93535 ), LECS_VATGU (P86893 ), LECS_VATMA (P81371 ), LEC_BAUPU (P16030 ), LEC_ERYCG (P83410 ), LEC_ERYCO (P16404 ), LEC_LATSP (P16349 ), LEC_LENCC (Q93WH6 ), LEC_LENCO (Q93X49 ), LEC_LENCT (Q8VXF2 ), LEC_LENCU (P02870 ), LEC_LEUMI (P42088 ), LEC_LOTTE (P19664 ), LEC_ONOVI (P02874 ), LEC_PEA (P02867 ), LEC_PHALU (P16300 ), LEC_SOYBN (P05046 ), LEC_VACFA (P84849 ), LEC_VICFA (P02871 ), LEC_VICVI (P56625 ), LK110_ARATH (Q3E884 ), LRK12_ARATH (Q7FK82 ), LRK16_ARATH (Q9M1G3 ), LRK17_ARATH (Q9LSS0 ), LRK19_ARATH (Q9LSR8 ), LRK22_ARATH (Q9FIF0 ), LRK32_ARATH (Q9ZW11 ), LRK43_ARATH (O81292 ), LRK51_ARATH (O04534 ), LRK59_ARATH (Q9SZD5 ), LRK81_ARATH (Q9LFH9 ), LRK82_ARATH (Q9LYX1 ), LRKS1_ARATH (Q9M9E0 ), LRKS5_ARATH (Q9FG33 ), LRKS6_ARATH (Q9FHX3 ), LRSK7_ORYSJ (A0A0P0VIP0), MALB_MAAAM (P93248 ), PHAE_PHAVU (P05088 ), PHAL_PHAVU (P05087 ), PHAM_PHAVU (P15231 ), SIT1_ORYSJ (Q6H7D2 ), YOUB_SCHPO (O74793 )» more
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UniProtKB/Swiss-Prot False negative sequences |
38 sequences
AR5A_PHAVU (Q42460 ), AR5B_PHAVU (Q41116 ), LEC10_MEDTR (A9YWS7 ), LEC11_MEDTR (A0A396GS61), LEC2_CYMRO (P86795 ), LEC6_MEDTR (A9YWS4 ), LEC9_MEDTR (Q2PP74 ), LECN_PEA (P16270 ), LECR_PEA (Q40987 ), LK111_ARATH (Q9FJI4 ), LRK11_ARATH (Q9M3E5 ), LRK13_ARATH (Q9M3D8 ), LRK14_ARATH (Q9M3D7 ), LRK15_ARATH (Q9M1G4 ), LRK18_ARATH (Q9LSR9 ), LRK21_ARATH (Q9FIF1 ), LRK31_ARATH (Q9ZW09 ), LRK41_ARATH (O80939 ), LRK42_ARATH (Q9M345 ), LRK44_ARATH (O81291 ), LRK52_ARATH (O04533 ), LRK53_ARATH (O22834 ), LRK54_ARATH (O22833 ), LRK55_ARATH (Q96285 ), LRK56_ARATH (Q9LEA3 ), LRK57_ARATH (Q9ZR79 ), LRK58_ARATH (Q9M1Z9 ), LRK61_ARATH (Q9SR87 ), LRK62_ARATH (Q9M021 ), LRK63_ARATH (Q9M020 ), LRK64_ARATH (Q66GN2 ), LRK71_ARATH (Q9S9U1 ), LRK72_ARATH (O49445 ), LRK91_ARATH (Q9LXA5 ), LRK92_ARATH (Q9LSL5 ), LRKS4_ARATH (Q9M2S4 ), LRKS7_ARATH (Q9FHG4 ), SIT2_ORYSJ (Q7XUN6 )» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
9 sequences
LEAH_PHAVU (P81870 ), LEC3_ULEEU (P23032 ), LEC_CROJU (P16352 ), LEC_CROPI (P16351 ), LEC_DELRE (P83511 ), LEC_MACAX (P02875 ), LG29_VIGUS (P83955 ), LG31_VIGUS (P83956 ), PVAP_PHAVU (P84869 )» more |
UniProtKB/Swiss-Prot 'Unknown' sequences |
1 sequence
RNJ_SINM2 (M4MR97 ) |
UniProtKB/Swiss-Prot False positive sequences |
168 sequences
3DHQ_PODAN (Q86ZM3 ), A92_SSV1 (P0C6K8 ), ACKA_TREDE (Q73P66 ), AROB_BORBR (Q7WR84 ), AROB_BORPA (Q7W2B6 ), AROB_BORPE (Q7VT93 ), BGALA_NEOFI (A1D1Z9 ), BGL21_ORYSJ (Q60DY1 ), BI1_ORYSJ (Q9MBD8 ), BIN3D_ARATH (Q6NPC9 ), CAOG1_ARATH (Q8H1H9 ), CARP3_CANAL (P0CY29 ), CARP3_CANAW (C4YNQ5 ), CARP3_CANAX (P0CY28 ), CDHR1_DANRE (Q6B3P0 ), CLPC_CHLMU (Q9PKA8 ), CLPC_CHLTR (O84288 ), CNOT1_DANRE (A1A5H6 ), CNOT1_HUMAN (A5YKK6 ), CNOT1_MOUSE (Q6ZQ08 ), CNOT1_XENTR (A0JP85 ), COAX_DEIRA (Q9RX54 ), COBG_SINSX (P21637 ), COXX_HALS3 (B0R3W4 ), COXX_HALSA (Q9HRJ8 ), DPO1_RICCN (Q92GB7 ), DPO1_RICFE (Q9RAA9 ), DPO1_RICHE (Q9RLB6 ), EGLN_MOUSE (Q63961 ), ENV_FRSFL (P03394 ), EPIP1_EPING (P83340 ), ERA_STRGC (O24756 ), ERA_STRMU (P37214 ), EXU2_DROPS (Q24617 ), EXU_DROME (P28750 ), EXU_DROVI (Q24747 ), FCGRN_MOUSE (Q61559 ), FCGRN_RAT (P13599 ), FMN2_HUMAN (Q9NZ56 ), GARS_BOMMO (Q04451 ), GARS_CAEEL (Q10039 ), GATC_POPTR (B9INH0 ), GDL13_ARATH (Q38894 ), GEFV_DICDI (Q55FD8 ), HEXB_FELCA (P49614 ), HIS7_LEGPA (Q5X5X1 ), HIS7_LEGPH (Q5ZW89 ), HIS7_LEGPL (Q5WX93 ), I5P2_HUMAN (P32019 ), IFFO1_HUMAN (Q0D2I5 ), IFFO1_MOUSE (Q8BXL9 ), IFFO2_HUMAN (Q5TF58 ), IFFO2_MOUSE (Q8R2V2 ), ITPR3_BOVIN (Q8WN95 ), ITPR3_HUMAN (Q14573 ), ITPR3_MOUSE (P70227 ), ITPR3_RAT (Q63269 ), K1C40_BOVIN (A7YWM2 ), K1C40_HUMAN (Q6A162 ), K1C40_MOUSE (Q6IFX3 ), KEX2_YEAST (P13134 ), KI16B_HUMAN (Q96L93 ), KI16B_MOUSE (B1AVY7 ), LEU3_XYLFA (Q9PAX3 ), LEU3_XYLFT (Q87BQ1 ), LIPLL_LISMO (Q8Y489 ), LIPL_GEOKA (Q5KUD7 ), LIPL_HALH5 (Q9K6A7 ), LRP2_HUMAN (P98164 ), LRP2_PIG (C0HL13 ), MAK5_VANPO (A7TEG8 ), MIAA_SALAI (A8M7W9 ), MIAA_SALTO (A4X4W1 ), MRAZ_MYCGA (Q7NB78 ), MTP_MESAU (P55158 ), NADK_NITEU (Q82UK6 ), NCPR_SALTR (P19618 ), NHAK_BACP2 (A8FHE3 ), NPY2R_BOVIN (P79113 ), NPY2R_CAVPO (Q9Z2D5 ), NPY2R_HUMAN (P49146 ), NPY2R_MACMU (Q9GK74 ), NPY2R_MOUSE (P97295 ), NPY2R_PANTR (Q5IS62 ), NPY2R_PIG (O02836 ), NUSB_COREF (Q8FT35 ), NUSB_CORGL (Q8NQ33 ), PANB_VEREI (A1WDW4 ), POL1_TRSVB (Q88893 ), PRMA_CLOAB (P45558 ), PUR4_CAEEL (Q19311 ), PUS10_AERPE (Q9YEN2 ), RDRP_SHMV (P89202 ), RECA_LACAC (Q5FL82 ), RECA_LACHE (Q02348 ), RECA_LACJO (P62216 ), RECA_RHOBA (Q7UJJ0 ), RECA_RUMA7 (P49985 ), RECA_STRCT (P41055 ), RIMM_CELJU (B3PDH6 ), RSMA_GEOMG (Q39W34 ), RTC5_PARBD (C1G788 ), RUVB_ANADF (A7H910 ), SAS6_CAEBR (Q60P76 ), SECY_CHLMU (Q9PJN1 ), SECY_CHLPN (Q9Z7S5 ), SGO1_HUMAN (Q5FBB7 ), SIN1_HUMAN (Q9BPZ7 ), SIN1_PONAB (Q5RDV5 ), SMC_BORPD (A9II65 ), SRP_DROME (P52172 ), STCE_EMENI (Q00674 ), STE20_YARLI (Q6C3D7 ), SWT1_HUMAN (Q5T5J6 ), SYA_SCHPO (O13914 ), SYG_BDEBA (Q6MNT9 ), SYG_BIFLO (Q8G7W9 ), SYG_CLOAB (Q97EB8 ), SYG_CLOPE (Q8XHL9 ), SYG_COREF (Q8FNG6 ), SYG_CORGL (Q8NNC6 ), SYG_CUTAK (Q6A964 ), SYG_DEIRA (Q9RSR5 ), SYG_LEIXX (Q6AHF7 ), SYG_MALP2 (Q8EW64 ), SYG_MESFL (Q6F1J8 ), SYG_MYCBO (P67033 ), SYG_MYCPA (Q73Y21 ), SYG_MYCTO (P9WFV6 ), SYG_MYCTU (P9WFV7 ), SYG_NOCFA (Q5YZT7 ), SYG_STRAW (Q82BR9 ), SYG_STRCO (Q9L2H9 ), SYH_MYCPA (P60917 ), SYI_CLOPE (Q8XHE4 ), SYM_META3 (A6UUN1 ), SYR_CLOAB (Q97K78 ), SYR_CLOPE (Q8XJU2 ), SYR_LATSS (Q38VQ9 ), SYV_COREF (Q8FN65 ), SYV_CORGL (Q8NN37 ), SYV_CORJK (Q4JWU8 ), SYV_NOCFA (Q5Z048 ), T2BB_BACIU (P33562 ), TBCD1_HUMAN (Q86TI0 ), TDCD_ECO57 (Q8XAF1 ), TDCD_ECOL6 (P59244 ), THTPA_RAT (Q8CGV7 ), TOF1_PICST (A3LR41 ), TPC1_HUMAN (Q9ULQ1 ), TPC1_MOUSE (Q9EQJ0 ), TPC1_RAT (Q9WTN5 ), TRH_DROME (Q24119 ), TRPC_HALSA (Q9HSC1 ), UL148_HCMVM (F5H8Q3 ), UREG_SPOPA (Q9RP19 ), VAM6_SCHPO (O13955 ), Y076_OSHVF (Q6R7F3 ), Y256_BUCBP (Q89AL2 ), Y765_SPHAL (Q1GV37 ), Y942_METJA (Q58352 ), YDGH_BACSU (P96706 ), YHJV_ECOLI (P37660 ), YIDF_SCHPO (Q9UTC4 ), YL581_MIMIV (Q5UR55 ), YR406_MIMIV (Q5UQK2 ), ZBT26_HUMAN (Q9HCK0 ), ZN287_MOUSE (Q9EQB9 )» more |
PDB [Detailed view] |
259 PDB
1APN; 1AVB; 1AX0; 1AX1; 1AX2; 1AXY; 1AXZ; 1AZD; 1BJQ; 1BQP; 1BXH; 1BZW; 1C57; 1CES; 1CIW; 1CJP; 1CN1; 1CON; 1CQ9; 1CR7; 1CVN; 1DHK; 1DQ0; 1DQ1; 1DQ2; 1DQ4; 1DQ5; 1DQ6; 1ENQ; 1ENR; 1ENS; 1FAT; 1FNY; 1FNZ; 1FX5; 1FYU; 1G7Y; 1G8W; 1G9F; 1GIC; 1GKB; 1GSL; 1GZ9; 1GZC; 1H9P; 1H9W; 1HKD; 1HQW; 1I3H; 1JBC; 1JN2; 1JOJ; 1JUI; 1JW6; 1JXN; 1JYC; 1JYI; 1LEC; 1LED; 1LEM; 1LEN; 1LES; 1LGB; 1LGC; 1LOA; 1LOB; 1LOC; 1LOD; 1LOE; 1LOF; 1LOG; 1LTE; 1LU1; 1LU2; 1LUL; 1MVQ; 1N47; 1NLS; 1NXD; 1OFS; 1ONA; 1QDC; 1QDO; 1QF3; 1QGL; 1QMO; 1QNW; 1QNY; 1RIN; 1RIR; 1RIT; 1SBD; 1SBE; 1SBF; 1SCR; 1SCS; 1SFY; 1TEI; 1V6I; 1V6J; 1V6K; 1V6L; 1V6M; 1V6N; 1V6O; 1VAL; 1VAM; 1VIW; 1VLN; 1WBF; 1WBL; 1WUV; 1XQN; 2A7A; 2B7Y; 2BQP; 2CNA; 2CTV; 2CWM; 2CY6; 2CYF; 2D3P; 2D3R; 2D3S; 2D7F; 2DH1; 2DTW; 2DTY; 2DU0; 2DU1; 2DV9; 2DVA; 2DVB; 2DVD; 2DVF; 2DVG; 2E51; 2E53; 2E7Q; 2E7T; 2EF6; 2EIG; 2ENR; 2FMD; 2G4I; 2GDF; 2JDZ; 2JE7; 2JE9; 2JEC; 2LAL; 2LTN; 2OVU; 2OW4; 2P2K; 2P34; 2P37; 2PEL; 2SBA; 2TEP; 2UU8; 2YZ4; 2ZBJ; 2ZMK; 2ZML; 2ZMN; 3CNA; 3D4K; 3ENR; 3IPV; 3JU9; 3N35; 3N36; 3N3H; 3NWK; 3QLQ; 3RRD; 3RS6; 3SH3; 3SNM; 3U4X; 3UJO; 3UJQ; 3UK9; 3UL2; 3WCR; 3WCS; 3WOG; 4CZS; 4D69; 4DPN; 4H55; 4I30; 4K1Y; 4K1Z; 4K20; 4K21; 4L8Q; 4M3C; 4MYE; 4NOT; 4P14; 4P9W; 4P9X; 4P9Y; 4PCR; 4PF5; 4TYS; 4TZD; 4U2A; 4U36; 4WV8; 4XTM; 4XTP; 4XXA; 4Z8B; 5AVA; 5BYN; 5CNA; 5EYX; 5EYY; 5F5Q; 5O6N; 5T7P; 5TG3; 5U3E; 5UUY; 5WEY; 5YGM; 5Z5L; 5Z5N; 5Z5P; 5Z5Y; 5ZAC; 6AHG; 6CJ9; 6GW9; 6H2M; 6V95; 6VAV; 6VAW; 6VB8; 6VC3; 6VC4; 6VGF; 6XT6; 7MG1; 7MG2; 7MG3; 7MG4; 7MG5; 7MG6; 7MG7; 7MG8; 7MG9; 7MGA; 7MGB; 7MGC; 7MGD » more |