PROSITE entry PS00308
View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry
| Entry name [info] | LECTIN_LEGUME_ALPHA |
| Accession [info] | PS00308 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00278 |
Name and characterization of the entry
| Description [info] | Legume lectins alpha-chain signature. |
| Pattern [info] |
[LIV]-{LA}-[EDQ]-[FYWKR]-V-{VF}-[LIVF]-G-[LF]-[ST].
|
Numerical results [info]
| Total number of hits | 114 in 114 different sequences |
| Number of true positive hits | 97 in 97 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 17 in 17 different sequences |
| Number of false negative sequences | 11 |
| Number of 'partial' sequences | 8 |
| Precision (true positives / (true positives + false positives)) | 85.09 % |
| Recall (true positives / (true positives + false negatives)) | 89.81 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
97 sequences
AR5A_PHAVU (Q42460), AR5B_PHAVU (Q41116), ARC1_PHAVU (P19329), ARC2_PHAVU (P19330), ARC4_PHAVU (Q43629), CONA_CANBR (P55915), CONA_CANCT (P81461), CONA_CANEN (P02866), CONA_CANGL (P14894), CONA_CANLI (P81460), CONA_CANRO (P81364), CONV_CANCT (C0HJY1), FRIL_LABPU (Q9ZTA9), LCB1_ROBPS (Q41159), LCB2_ROBPS (Q42372), LCB3_ROBPS (Q41160), LCS1_ROBPS (Q41162), LCS2_ROBPS (Q41161), LEA1_PHAVU (P02873), LEA2_PHAVU (Q41114), LEC10_MEDTR (A9YWS7), LEC1_CLAKE (Q39528), LEC1_CRAMO (P83721), LEC1_CYTSE (P22970), LEC1_LABAL (P23558), LEC1_LATOC (P12306), LEC1_MEDTR (Q01806), LEC1_ULEEU (P22972), LEC1_VIGUC (P05045), LEC2_CLAKE (Q39529), LEC2_CYTSC (P29257), LEC2_CYTSE (P22971), LEC2_LATOC (P12307), LEC2_MEDTR (Q01807), LEC2_ULEEU (P22973), LEC4_GRISI (P24146), LEC5_MEDTR (A0A396HQY2), LEC5_VIGUC (P19588), LEC6_MEDTR (A9YWS4), LEC7_MEDTR (G7LII0), LEC8_MEDTR (Q2PP75), LEC9_MEDTR (Q2PP74), LECA2_LABPU (B3EWQ9), LECA_BIOPE (J9PBR3), LECA_CANBL (A0A023GPI8), LECA_CANBN (P58906), LECA_CANGR (A0A067XG71), LECA_CRAAG (P81517), LECA_CYMRO (P86184), LECA_DIOGR (P08902), LECA_DIOGU (P81637), LECA_DIOLA (C0HK27), LECA_DIOVI (P58907), LECA_LABPU (P38662), LECA_LATAP (P07441), LECA_LATCI (P07440), LECA_LATCY (P07442), LECA_LATHI (P07443), LECA_LATOD (P02869), LECA_LATSA (P12308), LECA_LATTI (P07444), LECA_MACBI (P58908), LECA_MACCS (C0HK81), LECA_MACSE (B3EWJ2), LECA_MACWI (P86624), LECA_SPAPA (P86352), LECA_VICCR (P02868), LECA_VICSA (P16350), LECB_SPAPA (P86353), LECB_STYJP (P93538), LECC1_CENMI (C0HK20), LECC1_CENTO (C0HJX1), LECG_ARAHY (P02872), LECR_CLAKE (Q39527), LECS_STYJP (P93535), LECS_VATGU (P86893), LECS_VATMA (P81371), LEC_BAUPU (P16030), LEC_ERYCG (P83410), LEC_ERYCO (P16404), LEC_LATSP (P16349), LEC_LENCC (Q93WH6), LEC_LENCO (Q93X49), LEC_LENCT (Q8VXF2), LEC_LENCU (P02870), LEC_LOTTE (P19664), LEC_ONOVI (P02874), LEC_PEA (P02867), LEC_PHALU (P16300), LEC_SOYBN (P05046), LEC_VICFA (P02871), LEC_VICVI (P56625), MALB_MAAAM (P93248), MALS_MAAAM (P0DKL3), PHAE_PHAVU (P05088), PHAL_PHAVU (P05087), PHAM_PHAVU (P15231)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
11 sequences
LEC11_MEDTR (A0A396GS61), LEC1_PSOTE (O24313), LEC2_CYMRO (P86795), LECC1_ARAHY (Q70DJ5), LECN_PEA(P16270), LECR_PEA(Q40987), LEC_LEUMI (P42088), LEC_VACFA (P84849), LRK62_ARATH (Q9M021), LRK63_ARATH (Q9M020), LRK64_ARATH (Q66GN2)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
8 sequences
LEAH_PHAVU (P81870), LEC3_ULEEU (P23032), LEC_CROJU (P16352), LEC_CROPI (P16351), LEC_MACAX (P02875), LG29_VIGUS (P83955), LG31_VIGUS (P83956), PVAP_PHAVU (P84869)» more |
| UniProtKB/Swiss-Prot False positive sequences |
17 sequences
O4A16_HUMAN (Q8NH70), O4A47_HUMAN (Q6IF82), O5P51_MOUSE (Q8VF65), OLF3_CANLF (Q95156), OR4A4_HUMAN (Q8NGN8), OR4A5_HUMAN (Q8NH83), OR4A8_HUMAN (P0C604), OR4CF_HUMAN (Q8NGM1), OR4K1_HUMAN (Q8NGD4), OR4KF_HUMAN (Q8NH41), OR4Q3_HUMAN (Q8NH05), OR5P6_MOUSE (Q8VG04), OR6C3_HUMAN (Q9NZP0), OR6J1_HUMAN (Q8NGC5), OR7AH_HUMAN (O14581), PRPF3_MOUSE (Q922U1), SYFB_SYMTH (Q67QF2)» more |
| PDB [Detailed view] |
255 PDB
1APN; 1AVB; 1AX0; 1AX1; 1AX2; 1AXY; 1AXZ; 1AZD; 1BJQ; 1BQP; 1BXH; 1BZW; 1C57; 1CES; 1CIW; 1CJP; 1CN1; 1CON; 1CQ9; 1CR7; 1CVN; 1DBN; 1DGL; 1DHK; 1DQ0; 1DQ1; 1DQ2; 1DQ4; 1DQ5; 1DQ6; 1ENQ; 1ENR; 1ENS; 1FAT; 1FNY; 1FNZ; 1FX5; 1FYU; 1G7Y; 1G8W; 1G9F; 1GIC; 1GKB; 1GSL; 1GZ9; 1GZC; 1H9P; 1H9W; 1HKD; 1HQW; 1I3H; 1IOA; 1JBC; 1JN2; 1JOJ; 1JUI; 1JW6; 1JXN; 1JYC; 1JYI; 1LEC; 1LED; 1LEM; 1LEN; 1LES; 1LGB; 1LGC; 1LOA; 1LOB; 1LOC; 1LOD; 1LOE; 1LOF; 1LOG; 1LTE; 1LU1; 1LU2; 1LUL; 1MVQ; 1N47; 1NLS; 1NXD; 1OFS; 1ONA; 1QDC; 1QDO; 1QF3; 1QGL; 1QMO; 1QNW; 1QNY; 1RIN; 1RIR; 1RIT; 1SBD; 1SBE; 1SBF; 1SCR; 1SCS; 1SFY; 1TEI; 1V6I; 1V6J; 1V6K; 1V6L; 1V6M; 1V6N; 1V6O; 1VAL; 1VAM; 1VIW; 1VLN; 1WUV; 1XQN; 2A7A; 2B7Y; 2BQP; 2CNA; 2CTV; 2CWM; 2CY6; 2CYF; 2D3P; 2D3R; 2D7F; 2DH1; 2DV9; 2DVA; 2DVB; 2DVD; 2DVF; 2DVG; 2EF6; 2EIG; 2ENR; 2G4I; 2GDF; 2JDZ; 2JE7; 2JE9; 2JEC; 2LAL; 2LTN; 2OVU; 2OW4; 2P2K; 2P34; 2P37; 2PEL; 2SBA; 2TEP; 2UU8; 2YZ4; 2ZBJ; 3CNA; 3D4K; 3ENR; 3IPV; 3JU9; 3N35; 3N36; 3N3H; 3NWK; 3QLQ; 3RRD; 3RS6; 3SH3; 3SNM; 3U4X; 3UJO; 3UJQ; 3UK9; 3UL2; 3WCR; 3WCS; 3WOG; 4CZS; 4D69; 4DPN; 4H55; 4I30; 4K1Y; 4K1Z; 4K20; 4K21; 4L8Q; 4M3C; 4MYE; 4NOT; 4P14; 4P9W; 4P9X; 4P9Y; 4PCR; 4PF5; 4TYS; 4TZD; 4U2A; 4U36; 4WV8; 4XTM; 4XTP; 4XXA; 4Z8B; 5AVA; 5BYN; 5CNA; 5EYX; 5EYY; 5F5Q; 5O6N; 5T7P; 5TG3; 5U3E; 5UUY; 5WEY; 5YGM; 5Z5L; 5Z5N; 5Z5P; 5Z5Y; 5ZAC; 6AHG; 6CJ9; 6GW9; 6H2M; 6V95; 6VAV; 6VAW; 6VB8; 6VC3; 6VC4; 6VGF; 6XT6; 7MG1; 7MG2; 7MG3; 7MG4; 7MG5; 7MG6; 7MG7; 7MG8; 7MG9; 7MGA; 7MGB; 7MGC; 7MGD; 8I7Q; 8UX7; 8WMG; 8WMK; 9B33; 9B34; 9B36; 9B37 » more |