PROSITE entry PS00308
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General information about the entry
| Entry name [info] | LECTIN_LEGUME_ALPHA |
| Accession [info] | PS00308 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE; 13-SEP-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00278 |
Name and characterization of the entry
| Description [info] | Legume lectins alpha-chain signature. |
| Pattern [info] |
[LIV]-{LA}-[EDQ]-[FYWKR]-V-{VF}-[LIVF]-G-[LF]-[ST].
|
Numerical results [info]
| Total number of hits | 114 in 114 different sequences |
| Number of true positive hits | 97 in 97 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 17 in 17 different sequences |
| Number of false negative sequences | 11 |
| Number of 'partial' sequences | 8 |
| Precision (true positives / (true positives + false positives)) | 85.09 % |
| Recall (true positives / (true positives + false negatives)) | 89.81 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
97 sequences
AR5A_PHAVU (Q42460), AR5B_PHAVU (Q41116), ARC1_PHAVU (P19329), ARC2_PHAVU (P19330), ARC4_PHAVU (Q43629), CONA_CANBR (P55915), CONA_CANCT (P81461), CONA_CANEN (P02866), CONA_CANGL (P14894), CONA_CANLI (P81460), CONA_CANRO (P81364), CONV_CANCT (C0HJY1), FRIL_LABPU (Q9ZTA9), LCB1_ROBPS (Q41159), LCB2_ROBPS (Q42372), LCB3_ROBPS (Q41160), LCS1_ROBPS (Q41162), LCS2_ROBPS (Q41161), LEA1_PHAVU (P02873), LEA2_PHAVU (Q41114), LEC10_MEDTR (A9YWS7), LEC1_CLAKE (Q39528), LEC1_CRAMO (P83721), LEC1_CYTSE (P22970), LEC1_LABAL (P23558), LEC1_LATOC (P12306), LEC1_MEDTR (Q01806), LEC1_ULEEU (P22972), LEC1_VIGUC (P05045), LEC2_CLAKE (Q39529), LEC2_CYTSC (P29257), LEC2_CYTSE (P22971), LEC2_LATOC (P12307), LEC2_MEDTR (Q01807), LEC2_ULEEU (P22973), LEC4_GRISI (P24146), LEC5_MEDTR (A0A396HQY2), LEC5_VIGUC (P19588), LEC6_MEDTR (A9YWS4), LEC7_MEDTR (G7LII0), LEC8_MEDTR (Q2PP75), LEC9_MEDTR (Q2PP74), LECA2_LABPU (B3EWQ9), LECA_BIOPE (J9PBR3), LECA_CANBL (A0A023GPI8), LECA_CANBN (P58906), LECA_CANGR (A0A067XG71), LECA_CRAAG (P81517), LECA_CYMRO (P86184), LECA_DIOGR (P08902), LECA_DIOGU (P81637), LECA_DIOLA (C0HK27), LECA_DIOSC (B3EWJ2), LECA_DIOVI (P58907), LECA_LABPU (P38662), LECA_LATAP (P07441), LECA_LATCI (P07440), LECA_LATCY (P07442), LECA_LATHI (P07443), LECA_LATOD (P02869), LECA_LATSA (P12308), LECA_LATTI (P07444), LECA_MACBI (P58908), LECA_MACCS (C0HK81), LECA_MACWI (P86624), LECA_SPAPA (P86352), LECA_VICCR (P02868), LECA_VICSA (P16350), LECB_SPAPA (P86353), LECB_STYJP (P93538), LECC1_CENMI (C0HK20), LECC1_CENTO (C0HJX1), LECG_ARAHY (P02872), LECR_CLAKE (Q39527), LECS_STYJP (P93535), LECS_VATGU (P86893), LECS_VATMA (P81371), LEC_BAUPU (P16030), LEC_ERYCG (P83410), LEC_ERYCO (P16404), LEC_LATSP (P16349), LEC_LENCC (Q93WH6), LEC_LENCO (Q93X49), LEC_LENCT (Q8VXF2), LEC_LENCU (P02870), LEC_LOTTE (P19664), LEC_ONOVI (P02874), LEC_PEA (P02867), LEC_PHALU (P16300), LEC_SOYBN (P05046), LEC_VICFA (P02871), LEC_VICVI (P56625), MALB_MAAAM (P93248), MALS_MAAAM (P0DKL3), PHAE_PHAVU (P05088), PHAL_PHAVU (P05087), PHAM_PHAVU (P15231)» more
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| UniProtKB/Swiss-Prot False negative sequences |
11 sequences
LEC11_MEDTR (A0A396GS61), LEC1_PSOTE (O24313), LEC2_CYMRO (P86795), LECC1_ARAHY (Q70DJ5), LECN_PEA(P16270), LECR_PEA(Q40987), LEC_LEUMI (P42088), LEC_VACFA (P84849), LRK62_ARATH (Q9M021), LRK63_ARATH (Q9M020), LRK64_ARATH (Q66GN2)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
8 sequences
LEAH_PHAVU (P81870), LEC3_ULEEU (P23032), LEC_CROJU (P16352), LEC_CROPI (P16351), LEC_MACAX (P02875), LG29_VIGUS (P83955), LG31_VIGUS (P83956), PVAP_PHAVU (P84869)» more |
| UniProtKB/Swiss-Prot False positive sequences |
17 sequences
O4A16_HUMAN (Q8NH70), O4A47_HUMAN (Q6IF82), O5P51_MOUSE (Q8VF65), OLF3_CANLF (Q95156), OR4A4_HUMAN (Q8NGN8), OR4A5_HUMAN (Q8NH83), OR4A8_HUMAN (P0C604), OR4CF_HUMAN (Q8NGM1), OR4K1_HUMAN (Q8NGD4), OR4KF_HUMAN (Q8NH41), OR4Q3_HUMAN (Q8NH05), OR5P6_MOUSE (Q8VG04), OR6C3_HUMAN (Q9NZP0), OR6J1_HUMAN (Q8NGC5), OR7AH_HUMAN (O14581), PRPF3_MOUSE (Q922U1), SYFB_SYMTH (Q67QF2)» more |
| PDB [Detailed view] |
247 PDB
1APN; 1AVB; 1AX0; 1AX1; 1AX2; 1AXY; 1AXZ; 1AZD; 1BJQ; 1BQP; 1BXH; 1BZW; 1C57; 1CES; 1CIW; 1CJP; 1CN1; 1CON; 1CQ9; 1CR7; 1CVN; 1DBN; 1DGL; 1DHK; 1DQ0; 1DQ1; 1DQ2; 1DQ4; 1DQ5; 1DQ6; 1ENQ; 1ENR; 1ENS; 1FAT; 1FNY; 1FNZ; 1FX5; 1FYU; 1G7Y; 1G8W; 1G9F; 1GIC; 1GKB; 1GSL; 1GZ9; 1GZC; 1H9P; 1H9W; 1HKD; 1HQW; 1I3H; 1IOA; 1JBC; 1JN2; 1JOJ; 1JUI; 1JW6; 1JXN; 1JYC; 1JYI; 1LEC; 1LED; 1LEM; 1LEN; 1LES; 1LGB; 1LGC; 1LOA; 1LOB; 1LOC; 1LOD; 1LOE; 1LOF; 1LOG; 1LTE; 1LU1; 1LU2; 1LUL; 1MVQ; 1N47; 1NLS; 1NXD; 1OFS; 1ONA; 1QDC; 1QDO; 1QF3; 1QGL; 1QMO; 1QNW; 1QNY; 1RIN; 1RIR; 1RIT; 1SBD; 1SBE; 1SBF; 1SCR; 1SCS; 1SFY; 1TEI; 1V6I; 1V6J; 1V6K; 1V6L; 1V6M; 1V6N; 1V6O; 1VAL; 1VAM; 1VIW; 1VLN; 1WUV; 1XQN; 2A7A; 2B7Y; 2BQP; 2CNA; 2CTV; 2CWM; 2CY6; 2CYF; 2D3P; 2D3R; 2D7F; 2DH1; 2DV9; 2DVA; 2DVB; 2DVD; 2DVF; 2DVG; 2EF6; 2EIG; 2ENR; 2G4I; 2GDF; 2JDZ; 2JE7; 2JE9; 2JEC; 2LAL; 2LTN; 2OVU; 2OW4; 2P2K; 2P34; 2P37; 2PEL; 2SBA; 2TEP; 2UU8; 2YZ4; 2ZBJ; 3CNA; 3D4K; 3ENR; 3IPV; 3JU9; 3N35; 3N36; 3N3H; 3NWK; 3QLQ; 3RRD; 3RS6; 3SH3; 3SNM; 3U4X; 3UJO; 3UJQ; 3UK9; 3UL2; 3WCR; 3WCS; 3WOG; 4CZS; 4D69; 4DPN; 4H55; 4I30; 4K1Y; 4K1Z; 4K20; 4K21; 4L8Q; 4M3C; 4MYE; 4NOT; 4P14; 4P9W; 4P9X; 4P9Y; 4PCR; 4PF5; 4TYS; 4TZD; 4U2A; 4U36; 4WV8; 4XTM; 4XTP; 4XXA; 4Z8B; 5AVA; 5BYN; 5CNA; 5EYX; 5EYY; 5F5Q; 5O6N; 5T7P; 5TG3; 5U3E; 5UUY; 5WEY; 5YGM; 5Z5L; 5Z5N; 5Z5P; 5Z5Y; 5ZAC; 6AHG; 6CJ9; 6GW9; 6H2M; 6V95; 6VAV; 6VAW; 6VB8; 6VC3; 6VC4; 6VGF; 6XT6; 7MG1; 7MG2; 7MG3; 7MG4; 7MG5; 7MG6; 7MG7; 7MG8; 7MG9; 7MGA; 7MGB; 7MGC; 7MGD » more |