PROSITE entry PS00318
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PURL: https://purl.expasy.org/prosite/signature/PS00318
Direct ScanProsite submission
General information about the entry
Entry name [info] | HMG_COA_REDUCTASE_2 |
Accession [info] | PS00318 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-APR-1990 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00064 |
Name and characterization of the entry
Description [info] | Hydroxymethylglutaryl-coenzyme A reductases signature 2. |
Pattern [info] |
[LIVM]-G-x-[LIVM]-G-G-[AG]-T. |
Numerical results [info]
Total number of hits | 93 in 93 different sequences |
Number of true positive hits | 67 in 67 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 26 in 26 different sequences |
Number of false negative sequences | 2 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 72.04 % |
Recall (true positives / (true positives + false negatives)) | 97.10 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
67 sequences
HMDH1_ARATH (P14891), HMDH1_ASPFU (Q4WHZ1), HMDH1_DICDI (P34135), HMDH1_GIBZE (I1RXX1), HMDH1_GOSHI (O64966), HMDH1_HEVBR (P29057), HMDH1_ORYSI (A2X8W3), HMDH1_ORYSJ (Q0DY59), HMDH1_SOLTU (P48020), HMDH1_YEAST (P12683), HMDH2_ARATH (P43256), HMDH2_ASPFU (Q4WSY2), HMDH2_CAPAN (Q9XEL8), HMDH2_DICDI (P34136), HMDH2_GOSHI (O64967), HMDH2_HEVBR (P29058), HMDH2_SOLLC (P48022), HMDH2_SOLTU (Q41437), HMDH2_YEAST (P12684), HMDH3_HEVBR (Q00583), HMDH3_ORYSJ (Q9XHL5), HMDH3_SOLTU (Q41438), HMDH_AERPE (Q9YAS4), HMDH_AGRIP (O76819), HMDH_ARCFU (O28538), HMDH_ASPTE (Q9Y7D2), HMDH_ASPTN (Q0C8L9), HMDH_BLAGE (P54960), HMDH_BOVIN (A7Z064), HMDH_CAMAC (P48021), HMDH_CANAL (A0A1D8PD39), HMDH_CATRO (Q03163), HMDH_CRIGR (P00347), HMDH_CYBJA (O74164), HMDH_DROME (P14773), HMDH_FUSFU (P0CT44), HMDH_GANLU (B2KX91), HMDH_GIBF5 (S0DQM8), HMDH_HALS3 (B0R6J9), HMDH_HALVD (Q59468), HMDH_HUMAN (P04035), HMDH_MAIZE (O24594), HMDH_MESAU (P09610), HMDH_METJA (Q58116), HMDH_MOUSE (Q01237), HMDH_NICSY (Q01559), HMDH_PHYB8 (Q12649), HMDH_PIG(Q1W675), HMDH_PONAB (Q5R6N3), HMDH_PYRAB (Q9V1R3), HMDH_PYRHO (O59469), HMDH_RABIT (Q29512), HMDH_RAT(P51639), HMDH_SACS2 (O08424), HMDH_SCHMA (P16237), HMDH_SCHPO (Q10283), HMDH_STRPU (P16393), HMDH_XENLA (P20715), HMGR1_CANSA (A0A7J6H013), HMGR1_PANGI (A0A0A1C3I2), HMGR2_CANSA (A0A803NI27), HMR2A_PANGI (A0A0A1C930), HMR2B_PANGI (U5JCC6), MLCD_PENCI (Q8J0F4), MOKG_MONPI (Q3S2U3), MVAA_PSEMV (P13702), PBCC_EMENI (C8VN86)» more
|
UniProtKB/Swiss-Prot False negative sequences |
2 sequences
HMDH_BORBU (O51628), HMDH_METTH (O26662) |
UniProtKB/Swiss-Prot False positive sequences |
26 sequences
AMIC_STRPN (P0A4M7), AMIC_STRR6 (P0A4M8), ARO1_SCLS1 (A7F7H0), ARO1_SCLSC (Q5XNP0), C3390_DROME (Q7KT91), CDX4_HUMAN (O14627), CND1_MOUSE (Q8K2Z4), DHOM_METGL (P37143), DHOM_PSEAE (P29365), DHON_METGL (P37144), GBA2_HUMAN (Q9HCG7), GBA2_MOUSE (Q69ZF3), GBA2_RAT(Q5M868), HIMH_ASPJA (A0A2Z5TIQ0), INIB_MYCTO (P9WJ96), INIB_MYCTU (P9WJ97), MSRA_LACSA (Q9SEC2), MURC_ERYLH (Q2NCY9), NU4C_SYNPW (A5GP41), SECY_METJA (Q60175), SIGJ_DICDI (Q6TMJ3), SYYM_ARATH (Q9M876), SYY_MESFL (Q6F0M8), SYY_STRAW (Q829F2), THIM_DESDA (B8J4C1), Y3023_ACIAD (P70736)» more |
PDB [Detailed view] |
40 PDB
pdb_00001dq8; pdb_00001dq9; pdb_00001dqa; pdb_00001hw8; pdb_00001hw9; pdb_00001hwi; pdb_00001hwj; pdb_00001hwk; pdb_00001hwl; pdb_00001qax; pdb_00001qay; pdb_00001r31; pdb_00001r7i; pdb_00001t02; pdb_00002q1l; pdb_00002q6b; pdb_00002q6c; pdb_00002r4f; pdb_00003bgl; pdb_00003cct; pdb_00003ccw; pdb_00003ccz; pdb_00003cd0; pdb_00003cd5; pdb_00003cd7; pdb_00003cda; pdb_00003cdb; pdb_00004i4b; pdb_00004i56; pdb_00004i64; pdb_00004i6a; pdb_00004i6w; pdb_00004i6y; pdb_00007uli; pdb_00008ecg; pdb_00008gdn; pdb_00008pkn; pdb_00008s6b; pdb_00008sz6; pdb_00008vlq » more |