PROSITE entry PS00318
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General information about the entry
Entry name [info] | HMG_COA_REDUCTASE_2 |
Accession [info] | PS00318 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-APR-1990 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00064 |
Name and characterization of the entry
Description [info] | Hydroxymethylglutaryl-coenzyme A reductases signature 2. |
Pattern [info] |
[LIVM]-G-x-[LIVM]-G-G-[AG]-T. |
Numerical results [info]
Total number of hits | 91 in 91 different sequences |
Number of true positive hits | 65 in 65 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 26 in 26 different sequences |
Number of false negative sequences | 2 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 71.43 % |
Recall (true positives / (true positives + false negatives)) | 97.01 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
65 sequences
HMDH1_ARATH (P14891), HMDH1_ASPFU (Q4WHZ1), HMDH1_DICDI (P34135), HMDH1_GIBZE (I1RXX1), HMDH1_GOSHI (O64966), HMDH1_HEVBR (P29057), HMDH1_ORYSI (A2X8W3), HMDH1_ORYSJ (Q0DY59), HMDH1_SOLTU (P48020), HMDH1_YEAST (P12683), HMDH2_ARATH (P43256), HMDH2_ASPFU (Q4WSY2), HMDH2_CAPAN (Q9XEL8), HMDH2_DICDI (P34136), HMDH2_GOSHI (O64967), HMDH2_HEVBR (P29058), HMDH2_SOLLC (P48022), HMDH2_SOLTU (Q41437), HMDH2_YEAST (P12684), HMDH3_HEVBR (Q00583), HMDH3_ORYSJ (Q9XHL5), HMDH3_SOLTU (Q41438), HMDH_AERPE (Q9YAS4), HMDH_AGRIP (O76819), HMDH_ARCFU (O28538), HMDH_ASPTE (Q9Y7D2), HMDH_ASPTN (Q0C8L9), HMDH_BLAGE (P54960), HMDH_BOVIN (A7Z064), HMDH_CAMAC (P48021), HMDH_CANAL (A0A1D8PD39), HMDH_CATRO (Q03163), HMDH_CRIGR (P00347), HMDH_CYBJA (O74164), HMDH_DROME (P14773), HMDH_GANLU (B2KX91), HMDH_GIBF5 (S0DQM8), HMDH_GIBFU (P0CT44), HMDH_HALS3 (B0R6J9), HMDH_HALVD (Q59468), HMDH_HUMAN (P04035), HMDH_MAIZE (O24594), HMDH_MESAU (P09610), HMDH_METJA (Q58116), HMDH_MOUSE (Q01237), HMDH_NICSY (Q01559), HMDH_PHYB8 (Q12649), HMDH_PIG(Q1W675), HMDH_PONAB (Q5R6N3), HMDH_PYRAB (Q9V1R3), HMDH_PYRHO (O59469), HMDH_RABIT (Q29512), HMDH_RAT(P51639), HMDH_SACS2 (O08424), HMDH_SCHMA (P16237), HMDH_SCHPO (Q10283), HMDH_STRPU (P16393), HMDH_XENLA (P20715), HMGR1_PANGI (A0A0A1C3I2), HMR2A_PANGI (A0A0A1C930), HMR2B_PANGI (U5JCC6), MLCD_PENCI (Q8J0F4), MOKG_MONPI (Q3S2U3), MVAA_PSEMV (P13702), PBCC_EMENI (C8VN86)» more
|
UniProtKB/Swiss-Prot False negative sequences |
2 sequences
HMDH_BORBU (O51628), HMDH_METTH (O26662) |
UniProtKB/Swiss-Prot False positive sequences |
26 sequences
AMIC_STRPN (P0A4M7), AMIC_STRR6 (P0A4M8), ARO1_SCLS1 (A7F7H0), ARO1_SCLSC (Q5XNP0), C3390_DROME (Q7KT91), CDX4_HUMAN (O14627), CND1_MOUSE (Q8K2Z4), DHOM_METGL (P37143), DHOM_PSEAE (P29365), DHON_METGL (P37144), GBA2_HUMAN (Q9HCG7), GBA2_MOUSE (Q69ZF3), GBA2_RAT(Q5M868), HIMH_ASPJA (A0A2Z5TIQ0), INIB_MYCTO (P9WJ96), INIB_MYCTU (P9WJ97), MSRA_LACSA (Q9SEC2), MURC_ERYLH (Q2NCY9), NU4C_SYNPW (A5GP41), SECY_METJA (Q60175), SIGJ_DICDI (Q6TMJ3), SYYM_ARATH (Q9M876), SYY_MESFL (Q6F0M8), SYY_STRAW (Q829F2), THIM_DESDA (B8J4C1), Y3023_ACIAD (P70736)» more |
PDB [Detailed view] |
35 PDB
1DQ8; 1DQ9; 1DQA; 1HW8; 1HW9; 1HWI; 1HWJ; 1HWK; 1HWL; 1QAX; 1QAY; 1R31; 1R7I; 1T02; 2Q1L; 2Q6B; 2Q6C; 2R4F; 3BGL; 3CCT; 3CCW; 3CCZ; 3CD0; 3CD5; 3CD7; 3CDA; 3CDB; 4I4B; 4I56; 4I64; 4I6A; 4I6W; 4I6Y; 7ULI; 8ECG » more |