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Entry: PS00322

General information about the entry

Entry name [info] HISTONE_H3_1
Accession [info] PS00322
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00287

Name and characterization of the entry

Description [info] Histone H3 signature 1.
Pattern [info]
K-A-P-R-K-[QH]-[LI].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 174 in 174 different sequences
Number of true positive hits 171 in 171 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 15
Number of 'partial' sequences 3
Precision (true positives / (true positives + false positives)) 98.28 %
Recall (true positives / (true positives + false negatives)) 91.94 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
171 sequences

H31T_HUMAN  (Q16695    ), H31_BOVIN   (P68432    ), H31_CANAL   (Q59VN2    ), 
H31_CHLRE   (Q42681    ), H31_DEBHA   (Q6BRZ5    ), H31_ENCCU   (Q8SS77    ), 
H31_HUMAN   (P68431    ), H31_LODEL   (A5DWE2    ), H31_MOUSE   (P68433    ), 
H31_MUSPA   (Q6LBF0    ), H31_PICGU   (A5DFC5    ), H31_PICST   (A3LXD5    ), 
H31_RAT     (Q6LED0    ), H31_SCHPO   (P09988    ), H31_TETPY   (P69149    ), 
H31_TETTH   (P69150    ), H31_USTMA   (Q4P7J7    ), H32_ARATH   (P59226    ), 
H32_ASPOF   (Q6LBE3    ), H32_BOVIN   (P84227    ), H32_BRANA   (Q6LCK1    ), 
H32_CAIMO   (P84230    ), H32_CHICK   (P84229    ), H32_CHLRE   (Q6LCW8    ), 
H32_CICIN   (Q5MYA4    ), H32_CRILO   (Q64400    ), H32_DANRE   (Q4QRF4    ), 
H32_ENCAL   (P08903    ), H32_EUPES   (Q71T45    ), H32_HUMAN   (Q71DI3    ), 
H32_ICTBU   (P84231    ), H32_LILLO   (Q402E1    ), H32_MAIZE   (P69246    ), 
H32_MEDSA   (P68429    ), H32_MOUSE   (P84228    ), H32_MUSPA   (Q6LBE8    ), 
H32_ONCMY   (P84234    ), H32_ONOVI   (P68430    ), H32_ORYSI   (A2Y533    ), 
H32_ORYSJ   (Q2RAD9    ), H32_PEA     (P68427    ), H32_PETCR   (P69248    ), 
H32_PORAF   (P84232    ), H32_TETAM   (P69110    ), H32_TETAU   (P69111    ), 
H32_TETCA   (P69112    ), H32_TETCU   (P69113    ), H32_TETEL   (P69114    ), 
H32_TETFU   (P69115    ), H32_TETHY   (P69116    ), H32_TETLE   (P69117    ), 
H32_TETMA   (P69118    ), H32_TETMI   (P69119    ), H32_TETNA   (P69120    ), 
H32_TETNI   (P69121    ), H32_TETPA   (P69123    ), H32_TETPI   (P69124    ), 
H32_TETPR   (P69122    ), H32_TETRO   (P69125    ), H32_TETSO   (P69126    ), 
H32_TETTR   (P69127    ), H32_TOBAC   (Q76MV0    ), H32_USTMA   (Q4PB04    ), 
H32_WHEAT   (P68428    ), H32_XENLA   (P84233    ), H32_XENTR   (Q28D37    ), 
H331_CAEEL  (Q10453    ), H332_CAEEL  (Q9U281    ), H33A_DROME  (C0HL66    ), 
H33A_LILLO  (Q402E2    ), H33B_DROME  (C0HL67    ), H33B_LILLO  (Q2Z2F4    ), 
H33L3_CAEEL (Q27489    ), H33_ARATH   (P59169    ), H33_BOVIN   (Q5E9F8    ), 
H33_CANAL   (Q5ADQ0    ), H33_CAPAN   (Q6RUR1    ), H33_CHICK   (P84247    ), 
H33_CHLRE   (P50564    ), H33_DANRE   (Q6PI20    ), H33_DEBHA   (Q6BMU4    ), 
H33_DROHY   (P84250    ), H33_GOSHI   (Q71V89    ), H33_HUMAN   (P84243    ), 
H33_LODEL   (A5E094    ), H33_LOLMU   (Q3C2E5    ), H33_LOLTE   (P69245    ), 
H33_MEDSA   (P69244    ), H33_MOUSE   (P84244    ), H33_ORYCO   (Q71U98    ), 
H33_ORYSI   (A2XHJ3    ), H33_ORYSJ   (Q0JCT1    ), H33_PICGU   (A5DG57    ), 
H33_PICST   (A3GHN6    ), H33_PIG     (Q71LE2    ), H33_PINPS   (Q711T2    ), 
H33_PONAB   (Q5RCC9    ), H33_RABIT   (P84246    ), H33_RAT     (P84245    ), 
H33_SCHPO   (P10651    ), H33_SPISO   (P84248    ), H33_STYLE   (P81197    ), 
H33_TETPY   (P15512    ), H33_TETTS   (P41353    ), H33_TOBAC   (Q76N23    ), 
H33_TRIPS   (Q8WSF1    ), H33_VITVI   (Q71H73    ), H33_XENLA   (Q6PI79    ), 
H33_XENTR   (Q6P823    ), H34_TETTS   (Q22RG7    ), H35_STYLE   (P81199    ), 
H36_STYLE   (P81200    ), H37_STYLE   (P81201    ), H38_STYLE   (P81202    ), 
H39_STYLE   (P81196    ), H3C_BOVIN   (A5PK61    ), H3C_CAIMO   (P06902    ), 
H3C_HUMAN   (Q6NXT2    ), H3C_MOUSE   (P02301    ), H3C_XENLA   (P02302    ), 
H3L2_LILLO  (Q9XG57    ), H3L3_LILLO  (Q2Z2F6    ), H3L5_ARATH  (Q9FKQ3    ), 
H3_ACRFO    (P22843    ), H3_AJECA    (Q9P427    ), H3_ASHGO    (Q757N1    ), 
H3_ASPCL    (A1CP80    ), H3_ASPFU    (P61832    ), H3_ASPNC    (A2QRR5    ), 
H3_ASPOR    (Q2UCQ0    ), H3_ASPTN    (Q0D0E8    ), H3_CAEEL    (P08898    ), 
H3_CANGA    (P61833    ), H3_CHAGB    (Q6DL03    ), H3_CHITH    (P84238    ), 
H3_COCIM    (Q1E225    ), H3_CRYNB    (P0CO05    ), H3_CRYNJ    (P0CO04    ), 
H3_DERIM    (P69071    ), H3_DROHY    (P84236    ), H3_DROME    (P02299    ), 
H3_EMENI    (P23753    ), H3_EUPCR    (P90543    ), H3_GIBZE    (Q4IER8    ), 
H3_GRIJA    (Q7XYZ0    ), H3_HYPJE    (P61835    ), H3_KLULA    (P61831    ), 
H3_LYTPI    (P69072    ), H3_MAGO7    (A4RCX7    ), H3_MARPO    (Q5DWI3    ), 
H3_MORAP    (Q9HDN1    ), H3_NARPS    (P80553    ), H3_NEOFI    (A1D240    ), 
H3_NEUCR    (P07041    ), H3_PARLI    (P69073    ), H3_PHANO    (Q0UY45    ), 
H3_PISBR    (P69074    ), H3_PISOC    (P69075    ), H3_PLADU    (P84235    ), 
H3_PSAMI    (P69076    ), H3_PYCHE    (P69077    ), H3_SOLST    (P69078    ), 
H3_STRDR    (P69079    ), H3_STRPU    (P06352    ), H3_TALFU    (P61834    ), 
H3_TIGCA    (P84237    ), H3_URECA    (P84239    ), H3_VOLCA    (P08437    ), 
H3_YARLI    (Q6C0C4    ), H3_YEAST    (P61830    ), H3_ZYGBA    (P61836    )
» more

UniProtKB/Swiss-Prot
False negative sequences
15 sequences

H31_STYLE   (P81195    ), H33B_DICDI  (Q55BN9    ), H33C_DICDI  (Q55BP0    ), 
H33L1_CAEEL (Q27490    ), H33L2_CAEEL (Q27532    ), H34_STYLE   (P81198    ), 
H3CL_BOVIN  (Q3SZB8    ), H3L_ENCCU   (Q8SQP3    ), H3V1_DICDI  (Q54F38    ), 
H3V2_DICDI  (Q54Z07    ), H3Y1_HUMAN  (P0DPK2    ), H3Y2_HUMAN  (P0DPK5    ), 
H3_ENTHI    (Q06196    ), H3_LEIIN    (P40285    ), H3_MASBA    (Q9U7D1    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
3 sequences

H32_TETBO   (P17319    ), H33_HORVU   (P06353    ), H3_PENVA    (P83864    )

		
UniProtKB/Swiss-Prot
False positive sequences
3 sequences

ARHGF_MOUSE (Q5FWH6    ), RSMA_CAMJE  (Q9PLW7    ), RSMA_CAMJR  (Q5HS85    )

		
PDB
[Detailed view]
290 PDB

1EQZ; 1F66; 1HQ3; 1ID3; 1KX3; 1KX4; 1KX5; 1M18; 1M19; 1M1A; 1M1D; 1P34; 1P3A; 1P3B; 1P3F; 1P3G; 1P3I; 1P3K; 1P3L; 1P3M; 1P3O; 1P3P; 1S32; 1TZY; 1U35; 1ZBB; 1ZLA; 2ARO; 2CV5; 2F8N; 2FJ7; 2HIO; 2IO5; 2KWJ; 2KWK; 2NQB; 2NZD; 2PYO; 2UXN; 2V1D; 3A1B; 3A6N; 3AFA; 3AV1; 3AV2; 3AYW; 3AZE; 3AZF; 3AZG; 3AZH; 3AZI; 3AZJ; 3AZK; 3AZL; 3AZM; 3AZN; 3B6F; 3B6G; 3C1B; 3C1C; 3C9K; 3KUY; 3KV4; 3KXB; 3LEL; 3LJA; 3LZ0; 3LZ1; 3MGP; 3MGQ; 3MGR; 3MGS; 3MNN; 3MVD; 3N9N; 3N9P; 3O34; 3O62; 3REH; 3REI; 3REJ; 3REK; 3REL; 3TU4; 3U5N; 3U5O; 3U5P; 3UT9; 3UTA; 3UTB; 3W96; 3W97; 3W99; 3WA9; 3WAA; 3WKJ; 3WTP; 3X1S; 3X1T; 3X1U; 3X1V; 4FT4; 4FWF; 4GU0; 4GUR; 4GUS; 4H9N; 4H9O; 4H9P; 4H9Q; 4H9R; 4H9S; 4HGA; 4J8U; 4J8V; 4J8W; 4J8X; 4JJN; 4KGC; 4KUD; 4LD9; 4LK9; 4LKA; 4LLB; 4MZG; 4QLC; 4R8P; 4UUZ; 4WU8; 4WU9; 4XUJ; 4YM5; 4YM6; 4Z5T; 4ZUX; 5AV5; 5AV6; 5AV8; 5AV9; 5AVB; 5AVC; 5B0Y; 5B0Z; 5B1L; 5B1M; 5B24; 5B2I; 5B2J; 5B31; 5B32; 5B33; 5B40; 5C3I; 5CP6; 5CPI; 5CPJ; 5CPK; 5DNM; 5DNN; 5DWQ; 5DX0; 5E5A; 5F99; 5GSE; 5GSU; 5GT0; 5GT3; 5GTC; 5H6Q; 5H6R; 5HQ2; 5I3L; 5IX2; 5JRG; 5KDM; 5KGF; 5NL0; 5O9G; 5OMX; 5ONG; 5ONW; 5OXV; 5OY7; 5VE8; 5X0X; 5X0Y; 5X60; 5X7X; 5XF3; 5XF4; 5XF5; 5XF6; 5XM0; 5XM1; 5Y0C; 5Y0D; 5Z23; 5Z30; 5Z3L; 5Z3O; 5Z3U; 5Z3V; 5ZBA; 5ZBB; 6A5L; 6A5O; 6A5P; 6A5R; 6A5T; 6A5U; 6DZT; 6ESF; 6ESG; 6ESH; 6ESI; 6FML; 6GEJ; 6GEN; 6HKT; 6HTS; 6I84; 6INQ; 6IR9; 6IRO; 6J4W; 6J4X; 6J4Y; 6J4Z; 6J50; 6J51; 6JOU; 6JR0; 6JR1; 6K1I; 6K1J; 6K1K; 6KIU; 6KIV; 6KIW; 6KIX; 6KIZ; 6KVD; 6KW3; 6KW4; 6L49; 6L4A; 6LTJ; 6NE3; 6NJ9; 6NN6; 6NOG; 6NQA; 6NZO; 6O22; 6O96; 6OM3; 6PWE; 6PWF; 6PWV; 6PWW; 6PWX; 6PX1; 6PX3; 6R0C; 6R1U; 6R25; 6R8Y; 6R8Z; 6R90; 6R91; 6R92; 6R93; 6R94; 6RNY; 6T79; 6T7A; 6T7B; 6T7C; 6T7D; 6T90; 6T93; 6T9L; 6TDA; 6UH5; 6UPK; 6UPL; 6UXW; 6V92; 6VEN; 6YOV
» more

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