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PROSITE entry PS00330


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General information about the entry

Entry name [info] HEMOLYSIN_CALCIUM
Accession [info] PS00330
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-APR-1990 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00293

Name and characterization of the entry

Description [info] Hemolysin-type calcium-binding region signature.
Pattern [info] 
D-x-[LI]-x(4)-G-x-D-x-[LI]-x-G-G-x(3)-D.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 232 in 60 different sequences
Number of true positive hits 230 in 59 different sequences
Number of 'unknown' hits 2 in 1 sequence
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.71 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 17
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 59 sequences 

ALGE1_AZOVI (Q44494), ALGE2_AZOVI (Q44495), ALGE3_AZOVI (Q44496), 

ALGE4_AZOVI (Q44493), ALGE5_AZOVI (Q44492), ALGE6_AZOVI (Q9ZFH0), 
ALGE7_AZOVI (Q9ZFG9), APRA_PSEAE  (Q03023), APRA_PSEE4  (Q1ID47), 
APRA_PSEMA  (A0A0C5CJR8), CYAA_BORBR  (Q57506), CYAA_BORP1  (J7QLC0), 
CYAA_BORPE  (P0DKX7), FRPA_NEIMB  (Q9K0K9), FRPA_NEIMC  (P55126), 
FRPC_NEIMB  (Q9JYV5), FRPC_NEIMC  (P55127), HLYAC_ECOLX (P09983), 
HLYAP_ECOLX (P08715), HLYA_ACTSU  (Q00951), LIPA_PSEFL  (P26504), 
LIPB_PSEFL  (P41773), LKA11_MANHA (P55118), LKA13_MANHA (Q9EV31), 
LKA14_MANHA (Q9EV33), LKA16_MANHA (Q9EV32), LKA1A_MANHA (P16535), 
LKA1B_MANHA (Q7BHI8), LKA2A_MANHA (Q9EV30), LKA2B_MANHA (P0C081), 
LKA2C_MANHA (P0C082), LKA2D_MANHA (Q9EV29), LKA2E_MANHA (Q9EV27), 
LKA7A_MANHA (P0C084), LKA7B_MANHA (P0C085), LKTA6_MANHA (P0C083), 
LKTA8_MANHA (Q9EV34), LKTA_BIBTR  (P55117), LKTA_MANGL  (Q9ETX2), 
LKTA_PASSP  (P55123), LTXA_AGGAC  (P16462), NODO_RHILV  (P15728), 
PAXA_PASAE  (Q9RCG8), PRTA1_PHOLU (Q84F70), PRTA_DICCH  (Q07295), 
PRTA_PHOAZ  (P82115), PRTA_PHOLL  (Q7N8R3), PRTB_DICCH  (P16316), 
PRTC_DICCH  (P16317), PRTG_DICCH  (Q07162), PRTX_DICCH  (P19144), 
PRZN_SERMA  (P23694), PRZN_SERME  (P07268), RTX11_ACTPL (P55128), 
RTX12_ACTPL (P55129), RTX2A_ACTPL (P15377), RTX31_ACTPL (P55130), 
RTX32_ACTPL (P55131), RTXA_KINKI  (A1YKW7)
» more

UniProtKB/Swiss-Prot
False negative sequences		 3 sequences 

EGLC_RHIME  (Q9Z3Q2), EXSH_RHIME  (O33680), ZAPA_PROMI  (Q11137)


				
	

	

		UniProtKB/Swiss-Prot
'Unknown' sequences		
		
			1 sequence
			


			
SLAP_SYNY3  (P73817)


				
	

	

		PDB
[Detailed view]		
		
			28 PDB
			


			1AF0; 1AKL; 1GO7; 1GO8; 1JIW; 1K7G; 1K7I; 1K7Q; 1KAP; 1SAT; 1SMP; 1SRP; 
			
				2AGM; 2ML1; 2ML2; 2ML3; 3HB2; 3HBU; 3HBV; 3HDA; 3VI1; 4I35; 5CVW; 5CXL; 
				5D7W; 6SUS; 7RAH; 7USL
			
			

			» more