PROSITE entry PS00330

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General information about the entry

Entry name [info]	HEMOLYSIN_CALCIUM
Accession [info]	PS00330
Entry type [info]	PATTERN
Date [info]	01-APR-1990 CREATED; 01-APR-1990 DATA UPDATE; 13-SEP-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00293

Name and characterization of the entry

Description [info]	Hemolysin-type calcium-binding region signature.
Pattern [info]	D-x-[LI]-x(4)-G-x-D-x-[LI]-x-G-G-x(3)-D.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_04 which contains 570'157 sequence entries.

Total number of hits	232 in 60 different sequences
Number of true positive hits	230 in 59 different sequences
Number of 'unknown' hits	2 in 1 sequence
Number of false positive hits	0
Number of false negative sequences	3
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	98.71 %

Comments [info]

Taxonomic range [info]	Prokaryotes (Bacteria)
Maximum number of repetitions [info]	17
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	59 sequences ALGE1_AZOVI (Q44494), ALGE2_AZOVI (Q44495), ALGE3_AZOVI (Q44496), ALGE4_AZOVI (Q44493), ALGE5_AZOVI (Q44492), ALGE6_AZOVI (Q9ZFH0), ALGE7_AZOVI (Q9ZFG9), APRA_PSEAE (Q03023), APRA_PSEE4 (Q1ID47), APRA_PSEMA (A0A0C5CJR8), CYAA_BORBR (Q57506), CYAA_BORP1 (J7QLC0), CYAA_BORPE (P0DKX7), FRPA_NEIMB (Q9K0K9), FRPA_NEIMC (P55126), FRPC_NEIMB (Q9JYV5), FRPC_NEIMC (P55127), HLYAC_ECOLX (P09983), HLYAP_ECOLX (P08715), HLYA_ACTSU (Q00951), LIPA_PSEFL (P26504), LIPB_PSEFL (P41773), LKA11_MANHA (P55118), LKA13_MANHA (Q9EV31), LKA14_MANHA (Q9EV33), LKA16_MANHA (Q9EV32), LKA1A_MANHA (P16535), LKA1B_MANHA (Q7BHI8), LKA2A_MANHA (Q9EV30), LKA2B_MANHA (P0C081), LKA2C_MANHA (P0C082), LKA2D_MANHA (Q9EV29), LKA2E_MANHA (Q9EV27), LKA7A_MANHA (P0C084), LKA7B_MANHA (P0C085), LKTA6_MANHA (P0C083), LKTA8_MANHA (Q9EV34), LKTA_BIBTR (P55117), LKTA_MANGL (Q9ETX2), LKTA_PASSP (P55123), LTXA_AGGAC (P16462), NODO_RHILV (P15728), PAXA_PASAE (Q9RCG8), PRTA1_PHOLU (Q84F70), PRTA_DICCH (Q07295), PRTA_PHOAZ (P82115), PRTA_PHOLL (Q7N8R3), PRTB_DICCH (P16316), PRTC_DICCH (P16317), PRTG_DICCH (Q07162), PRTX_DICCH (P19144), PRZN_SERMA (P23694), PRZN_SERME (P07268), RTX11_ACTPL (P55128), RTX12_ACTPL (P55129), RTX2A_ACTPL (P15377), RTX31_ACTPL (P55130), RTX32_ACTPL (P55131), RTXA_KINKI (A1YKW7) » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	3 sequences EGLC_RHIME (Q9Z3Q2), EXSH_RHIME (O33680), ZAPA_PROMI (Q11137)
UniProtKB/Swiss-Prot 'Unknown' sequences	1 sequence SLAP_SYNY3 (P73817)
PDB [Detailed view]	28 PDB 1AF0; 1AKL; 1GO7; 1GO8; 1JIW; 1K7G; 1K7I; 1K7Q; 1KAP; 1SAT; 1SMP; 1SRP; 2AGM; 2ML1; 2ML2; 2ML3; 3HB2; 3HBU; 3HBV; 3HDA; 3VI1; 4I35; 5CVW; 5CXL; 5D7W; 6SUS; 7RAH; 7USL » more